Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31055
         (732 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-929|AAF54372.1|  694|Drosophila melanogaster CG8135-PA ...    29   6.5  
AY119474-1|AAM50128.1|  694|Drosophila melanogaster GH05505p pro...    29   8.6  
AY071432-1|AAL49054.1|  537|Drosophila melanogaster RE52038p pro...    29   8.6  
AY069385-1|AAL39530.1|  779|Drosophila melanogaster LD09511p pro...    29   8.6  
AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA...    29   8.6  
AE014134-1067|AAF52357.2|  537|Drosophila melanogaster CG9481-PA...    29   8.6  

>AE014297-929|AAF54372.1|  694|Drosophila melanogaster CG8135-PA
           protein.
          Length = 694

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 447 CLLTSQLTSH*IWENLRFLLRHPV 518
           C+LT+ +++  +W  L F  RHPV
Sbjct: 384 CVLTATMSAMVVWSELTFFSRHPV 407


>AY119474-1|AAM50128.1|  694|Drosophila melanogaster GH05505p
           protein.
          Length = 694

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 447 CLLTSQLTSH*IWENLRFLLRHPV 518
           C+LT+ +++  +W  L F  RHPV
Sbjct: 384 CVLTATMSAIVVWSELTFFSRHPV 407


>AY071432-1|AAL49054.1|  537|Drosophila melanogaster RE52038p
           protein.
          Length = 537

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 713 RGGKPPNFPH*IRNLVGGLAVPLF 642
           +GGKP  F H + NL+G +A  LF
Sbjct: 192 KGGKPLGFGHRVLNLLGSMAQRLF 215


>AY069385-1|AAL39530.1|  779|Drosophila melanogaster LD09511p
           protein.
          Length = 779

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 31  YSGWV*IKRTNHRQTVNWHYVRC 99
           Y+ W    +  H   V+WHYV+C
Sbjct: 86  YASWRNDSQLTHADVVSWHYVQC 108


>AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA
            protein.
          Length = 2898

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 31   YSGWV*IKRTNHRQTVNWHYVRC 99
            Y+ W    +  H   V+WHYV+C
Sbjct: 2205 YASWRNDSQLTHADVVSWHYVQC 2227


>AE014134-1067|AAF52357.2|  537|Drosophila melanogaster CG9481-PA
           protein.
          Length = 537

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 713 RGGKPPNFPH*IRNLVGGLAVPLF 642
           +GGKP  F H + NL+G +A  LF
Sbjct: 192 KGGKPLGFGHRVLNLLGSMAQRLF 215


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,977,275
Number of Sequences: 53049
Number of extensions: 656376
Number of successful extensions: 1226
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)