Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31055
         (732 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   3.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   3.0  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.0  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -1

Query: 306 YDRFNLDIPIVLAMIYVSLTPQVLNSFSE*LDFEK-KTVILKQKNEN 169
           YDR  + + +VLA +Y    P  L  ++E L+++   T  L++  +N
Sbjct: 80  YDRTKMSLQLVLAALY---PPNKLQQWNEDLNWQPIATKYLRRYEDN 123


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -1

Query: 306 YDRFNLDIPIVLAMIYVSLTPQVLNSFSE*LDFEK-KTVILKQKNEN 169
           YDR  + + +VLA +Y    P  L  ++E L+++   T  L++  +N
Sbjct: 95  YDRTKMSLQLVLAALY---PPNKLQQWNEDLNWQPIATKYLRRYEDN 138


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 723 TLYPGWKTPKF 691
           TLYPG + P F
Sbjct: 110 TLYPGMRAPSF 120


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 723 TLYPGWKTPKF 691
           TLYPG + P F
Sbjct: 110 TLYPGMRAPSF 120


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,001
Number of Sequences: 438
Number of extensions: 4838
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)