Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31054
(701 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q17IB0 Cluster: Transcription factor IIIB 90 kDa subuni... 146 3e-34
UniRef50_Q9VEL2 Cluster: CG31256-PA; n=7; Endopterygota|Rep: CG3... 138 9e-32
UniRef50_Q92994 Cluster: Transcription factor IIIB 90 kDa subuni... 118 1e-25
UniRef50_A7T629 Cluster: Predicted protein; n=2; Nematostella ve... 111 1e-23
UniRef50_Q20429 Cluster: Brf (Transcription factor) homolog prot... 103 6e-21
UniRef50_Q7QB20 Cluster: ENSANGP00000013305; n=1; Anopheles gamb... 90 4e-17
UniRef50_Q4PHC2 Cluster: Putative uncharacterized protein; n=1; ... 87 3e-16
UniRef50_Q1JSU6 Cluster: Transcription factor IIIb subunit, puta... 87 4e-16
UniRef50_Q92994-4 Cluster: Isoform 4 of Q92994 ; n=2; Homo sapie... 86 7e-16
UniRef50_Q8SRY7 Cluster: TRANSCRIPTION INITIATION FACTOR TFIII B... 86 7e-16
UniRef50_Q5CRA9 Cluster: Cyclin domain protein; n=2; Cryptospori... 84 3e-15
UniRef50_Q9P6R0 Cluster: Transcription factor IIIB 60 kDa subuni... 83 8e-15
UniRef50_Q4S6G3 Cluster: Chromosome 10 SCAF14728, whole genome s... 82 1e-14
UniRef50_A5DLD8 Cluster: Putative uncharacterized protein; n=1; ... 81 3e-14
UniRef50_Q4UC65 Cluster: Genomic DNA chromosome 3; n=3; Piroplas... 80 6e-14
UniRef50_Q4T2A5 Cluster: Chromosome undetermined SCAF10300, whol... 79 1e-13
UniRef50_Q9AVY2 Cluster: TFIIB related factor hBRF; n=1; Guillar... 78 2e-13
UniRef50_UPI00004997AD Cluster: transcription initiation factor ... 78 2e-13
UniRef50_Q54U85 Cluster: Transcription factor IIIB; n=1; Dictyos... 77 4e-13
UniRef50_P43072 Cluster: Transcription factor IIIB 70 kDa subuni... 77 6e-13
UniRef50_Q8IKY2 Cluster: Transcription factor IIIb subunit, puta... 76 1e-12
UniRef50_A5K3R6 Cluster: Transcription factor IIIb subunit, puta... 75 2e-12
UniRef50_P29056 Cluster: Transcription factor IIIB 70 kDa subuni... 74 4e-12
UniRef50_Q7R8B0 Cluster: Transcription factor iiib 70 kDa subuni... 73 5e-12
UniRef50_Q4T2A7 Cluster: Chromosome undetermined SCAF10300, whol... 73 7e-12
UniRef50_P46070 Cluster: Transcription factor IIIB 70 kDa subuni... 73 9e-12
UniRef50_Q00X13 Cluster: Transcription factor IIB; n=2; Ostreoco... 69 1e-10
UniRef50_Q6C4S8 Cluster: Similar to sp|P29056 Saccharomyces cere... 69 1e-10
UniRef50_UPI00006CFA73 Cluster: Transcription factor TFIIB repea... 66 6e-10
UniRef50_Q5KFT1 Cluster: Transcription factor iiib 70 kd subunit... 66 8e-10
UniRef50_Q2H1N9 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09
UniRef50_Q4S6G5 Cluster: Chromosome 10 SCAF14728, whole genome s... 63 6e-09
UniRef50_A6R8J6 Cluster: Putative uncharacterized protein; n=1; ... 60 4e-08
UniRef50_A7QRG5 Cluster: Chromosome chr8 scaffold_150, whole gen... 60 7e-08
UniRef50_A1D6E9 Cluster: Transcription factor TFIIIB complex sub... 60 7e-08
UniRef50_A1CL18 Cluster: Transcription factor TFIIIB complex sub... 60 7e-08
UniRef50_Q0DJB2 Cluster: Os05g0305100 protein; n=3; Oryza sativa... 58 3e-07
UniRef50_Q8ZWS3 Cluster: Transcription initiation factor IIB; n=... 57 5e-07
UniRef50_UPI000023CB24 Cluster: hypothetical protein FG04004.1; ... 56 6e-07
UniRef50_A6RWP2 Cluster: Putative uncharacterized protein; n=2; ... 56 6e-07
UniRef50_A7D4I1 Cluster: Transcription factor TFIIB, cyclin-rela... 56 8e-07
UniRef50_Q7RY40 Cluster: Putative uncharacterized protein NCU045... 55 1e-06
UniRef50_Q0V0E6 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_A4RG97 Cluster: Putative uncharacterized protein; n=1; ... 53 8e-06
UniRef50_Q58192 Cluster: Transcription initiation factor IIB (TF... 52 2e-05
UniRef50_Q649S4 Cluster: Transcription initiation factor IIB; n=... 50 4e-05
UniRef50_Q0WVQ3 Cluster: Putative transcription factor; n=5; Ara... 50 6e-05
UniRef50_Q4S6G6 Cluster: Chromosome 10 SCAF14728, whole genome s... 50 7e-05
UniRef50_A2EJ51 Cluster: Transcription factor TFIIB repeat famil... 49 1e-04
UniRef50_Q9S9Q7 Cluster: F26G16.4 protein; n=1; Arabidopsis thal... 48 2e-04
UniRef50_A0E531 Cluster: Chromosome undetermined scaffold_79, wh... 48 3e-04
UniRef50_Q4QA51 Cluster: Transcription factor, putative; n=3; Le... 47 4e-04
UniRef50_Q9ZU39 Cluster: Putative transcription factor; n=1; Ara... 47 5e-04
UniRef50_Q9HRE6 Cluster: Transcription initiation factor IIB 2; ... 46 7e-04
UniRef50_Q387K4 Cluster: Transcription factor, putative; n=2; Tr... 46 9e-04
UniRef50_Q977X4 Cluster: Transcription initiation factor IIB; n=... 46 9e-04
UniRef50_A0RX88 Cluster: Transcription initiation factor TFIIB; ... 46 0.001
UniRef50_A7D559 Cluster: Transcription factor TFIIB, cyclin-rela... 45 0.002
UniRef50_Q979P7 Cluster: Transcription initiation factor IIB 2; ... 45 0.002
UniRef50_Q74NG0 Cluster: NEQ276; n=1; Nanoarchaeum equitans|Rep:... 44 0.003
UniRef50_Q016X1 Cluster: Transcription factor IIIB; n=2; Ostreoc... 44 0.004
UniRef50_Q9HNA2 Cluster: Transcription initiation factor IIB 1; ... 42 0.015
UniRef50_Q9HR45 Cluster: Transcription initiation factor IIB 4; ... 42 0.019
UniRef50_UPI00015BAF36 Cluster: Transcription initiation factor ... 39 0.10
UniRef50_A7DMT5 Cluster: Transcription factor TFIIB, cyclin-rela... 39 0.14
UniRef50_Q8U2Z1 Cluster: Transcription initiation factor IIB cha... 38 0.24
UniRef50_Q8TXP2 Cluster: Transcription initiation factor IIB; n=... 38 0.32
UniRef50_Q8TX21 Cluster: Transcription initiation factor IIB; n=... 38 0.32
UniRef50_Q9Y942 Cluster: Transcription initiation factor IIB; n=... 37 0.55
UniRef50_A7DP14 Cluster: Transcription factor TFIIB, cyclin-rela... 36 0.73
UniRef50_Q00403 Cluster: Transcription initiation factor IIB; n=... 36 0.73
UniRef50_Q6ZW61 Cluster: Bardet-Biedl syndrome 12 protein; n=15;... 35 1.7
UniRef50_A6RNC6 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_Q0UK00 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_A1RX53 Cluster: Zinc finger, TFIIB-type domain protein;... 33 6.8
UniRef50_Q5LBL8 Cluster: Putative glycosyltransferase protein; n... 33 9.0
>UniRef50_Q17IB0 Cluster: Transcription factor IIIB 90 kDa subunit;
n=4; Endopterygota|Rep: Transcription factor IIIB 90 kDa
subunit - Aedes aegypti (Yellowfever mosquito)
Length = 644
Score = 146 bits (355), Expect = 3e-34
Identities = 66/113 (58%), Positives = 83/113 (73%)
Frame = +3
Query: 189 FLQNGLIQTFDYRQAGNTYPSCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSR 368
F + LI+ + + CVY+TCRTEGT HLLID+SD + +CCY+LGR Y KLS+
Sbjct: 112 FFKMALIRHLTRGRRNTHIYAACVYITCRTEGTSHLLIDISDVLQICCYELGRTYLKLSQ 171
Query: 369 ALCINIPPTDPCLYILRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
ALCINIP DPC+YI+R+A++L+F +K HEVSMTA RL QRMKKDSI G P
Sbjct: 172 ALCINIPSIDPCIYIMRYANKLEFAEKTHEVSMTAQRLVQRMKKDSIHSGRRP 224
Score = 115 bits (276), Expect = 1e-24
Identities = 54/84 (64%), Positives = 66/84 (78%)
Frame = +1
Query: 4 ASAIGQFVSADTKGGATGFGRAFNAGIGQESKEITLRKARIGITALCQQLRLNQQCIDIA 183
+SA+GQFV++D+KGGAT +G+ F+ G G ES+E+TLRKAR GIT LC QL LN CI+ A
Sbjct: 51 SSAVGQFVASDSKGGATAYGK-FHVGTGTESREVTLRKARQGITHLCHQLHLNNHCIETA 109
Query: 184 CNFYKMALSRHLTIGRPVTHTQAA 255
CNF+KMAL RHLT GR TH AA
Sbjct: 110 CNFFKMALIRHLTRGRRNTHIYAA 133
Score = 91.9 bits (218), Expect = 1e-17
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = +2
Query: 509 HSGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSETP 664
HSGRRPSG+CGAALL+AAR+HEFSRTP+DIVRIVK+HESTLRK ETP
Sbjct: 219 HSGRRPSGLCGAALLLAARMHEFSRTPNDIVRIVKIHESTLRKRLVEFGETP 270
>UniRef50_Q9VEL2 Cluster: CG31256-PA; n=7; Endopterygota|Rep:
CG31256-PA - Drosophila melanogaster (Fruit fly)
Length = 662
Score = 138 bits (335), Expect = 9e-32
Identities = 64/101 (63%), Positives = 77/101 (76%)
Frame = +3
Query: 225 RQAGNTYPSCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPC 404
R++ + Y + CVYMTCRTEGT HLLID+SD +C Y+LGR Y KLS ALCINIP DPC
Sbjct: 127 RKSTHIY-AACVYMTCRTEGTSHLLIDISDVQQICSYELGRTYLKLSHALCINIPSLDPC 185
Query: 405 LYILRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
LYI+RFA++L+ K HEVSMTALR+ QRMKKD + G P
Sbjct: 186 LYIMRFANRLQLGAKTHEVSMTALRIVQRMKKDCMHSGRRP 226
Score = 103 bits (248), Expect = 3e-21
Identities = 51/86 (59%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 GASAIGQFVSADTKGGATGFGRA-FNAGIGQESKEITLRKARIGITALCQQLRLNQQCID 177
GA+AIGQFVSA++ GGAT +G F G G ES+E+T++KA+ IT LCQQL+L+Q D
Sbjct: 50 GAAAIGQFVSAESSGGATNYGYGKFQVGSGTESREVTIKKAKKDITLLCQQLQLSQHYAD 109
Query: 178 IACNFYKMALSRHLTIGRPVTHTQAA 255
A NF+KMAL RHLT GR TH AA
Sbjct: 110 TALNFFKMALGRHLTRGRKSTHIYAA 135
Score = 81.8 bits (193), Expect = 1e-14
Identities = 35/52 (67%), Positives = 44/52 (84%)
Frame = +2
Query: 509 HSGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSETP 664
HSGRRP+G+CGAALLIAAR+H+FSRT D++ +VK+HESTLRK +ETP
Sbjct: 221 HSGRRPTGLCGAALLIAARMHDFSRTMLDVIGVVKIHESTLRKRLSEFAETP 272
>UniRef50_Q92994 Cluster: Transcription factor IIIB 90 kDa subunit;
n=43; Euteleostomi|Rep: Transcription factor IIIB 90 kDa
subunit - Homo sapiens (Human)
Length = 677
Score = 118 bits (285), Expect = 1e-25
Identities = 53/93 (56%), Positives = 68/93 (73%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFAS 428
+ C+Y+ CRTEGTPH+L+D+SD + + Y LG+ + L+R LCIN P DPCLYI RFA
Sbjct: 133 AACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAPAIDPCLYIPRFAH 192
Query: 429 QLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
L+F +K HEVSMTALRL QRMK+D + G P
Sbjct: 193 LLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRP 225
Score = 86.2 bits (204), Expect = 7e-16
Identities = 43/85 (50%), Positives = 55/85 (64%)
Frame = +1
Query: 1 GASAIGQFVSADTKGGATGFGRAFNAGIGQESKEITLRKARIGITALCQQLRLNQQCIDI 180
G+SA+GQFVS D G G F+ +G+ES+ TL+ R I L QL+LNQ C+D
Sbjct: 50 GSSAVGQFVSLDGAGKTPTLGGGFHVNLGKESRAQTLQNGRRHIHHLGNQLQLNQHCLDT 109
Query: 181 ACNFYKMALSRHLTIGRPVTHTQAA 255
A NF+KMA+SRHLT GR + H AA
Sbjct: 110 AFNFFKMAVSRHLTRGRKMAHVIAA 134
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = +2
Query: 509 HSGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSETPPFQ 673
H+GRRPSG+CGAALL+AAR+H+F RT +++ +VKV ESTLRK +TP Q
Sbjct: 220 HTGRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVCESTLRKRLTEFEDTPTSQ 274
>UniRef50_A7T629 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 522
Score = 111 bits (268), Expect = 1e-23
Identities = 49/93 (52%), Positives = 68/93 (73%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFAS 428
+ C+Y+ CRTE TPH+L+D SD + + + LGRAY KL++ L IN+P DPCLYI RFA
Sbjct: 131 AACLYLVCRTERTPHMLLDFSDILQIDVFTLGRAYLKLAQELYINLPAIDPCLYIHRFAH 190
Query: 429 QLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
+L+ +K+H+V++TALRL RMK+D I G P
Sbjct: 191 KLELGEKEHDVAVTALRLVSRMKRDWIHHGRRP 223
Score = 67.7 bits (158), Expect = 3e-10
Identities = 27/55 (49%), Positives = 42/55 (76%)
Frame = +2
Query: 509 HSGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSETPPFQ 673
H GRRPSG+CGAALL+A+RLH F+R+ ++V++V++ ++T+RK +TP Q
Sbjct: 218 HHGRRPSGLCGAALLVASRLHSFNRSVREVVKVVRISDTTIRKRLGEFKDTPSSQ 272
Score = 59.7 bits (138), Expect = 7e-08
Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 GASAIGQFVSADTKGGATGFGRAFNAG--IGQESKEITLRKARIGITALCQQLRLNQQCI 174
G SAIGQFVS++ G FG G + +L K R I L QL++NQ CI
Sbjct: 49 GTSAIGQFVSSE---GKEQFGTPSRGGGTYVHLNHFWSLFKGRKRINQLGHQLQMNQHCI 105
Query: 175 DIACNFYKMALSRHLTIGRPVTHTQAA 255
D A NFYK+A+++ LT GR H AA
Sbjct: 106 DTAYNFYKLAVNKRLTRGRRTAHVVAA 132
>UniRef50_Q20429 Cluster: Brf (Transcription factor) homolog protein
1; n=2; Caenorhabditis|Rep: Brf (Transcription factor)
homolog protein 1 - Caenorhabditis elegans
Length = 759
Score = 103 bits (246), Expect = 6e-21
Identities = 50/91 (54%), Positives = 61/91 (67%)
Frame = +3
Query: 255 CVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFASQL 434
C+Y+TCR E T HLL+D SD + + LGR LSR+L IN+P TDPCLYI+RFA L
Sbjct: 130 CMYITCRLENTAHLLLDFSDVTQINVFDLGRNLNYLSRSLRINLPSTDPCLYIMRFACVL 189
Query: 435 KFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
F DKQ EV A RL QRMK+D ++ G P
Sbjct: 190 DFGDKQKEVVNLATRLVQRMKRDWMSTGRRP 220
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSETP 664
+GRRP+GICGAALLIAAR F+R+ +DIVR+V + E +RK S+TP
Sbjct: 216 TGRRPTGICGAALLIAARSLNFNRSINDIVRVVHISEGVIRKRLDEFSQTP 266
Score = 61.3 bits (142), Expect = 2e-08
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +1
Query: 1 GASAIGQFVSADTKGGATGFGRAFNAGIG-QESKEITLRKARIGITALCQQLRLNQQCID 177
G + +GQFVS++ + A F G+G QES+E+T K R I L QLR+N C++
Sbjct: 50 GHTLVGQFVSSE-RAAANNFN-----GMGSQESREMTYAKGRKVIDELGSQLRINSHCMN 103
Query: 178 IACNFYKMALSRHLTIGR 231
A NFYKM +SR+LT GR
Sbjct: 104 TAFNFYKMCVSRNLTRGR 121
>UniRef50_Q7QB20 Cluster: ENSANGP00000013305; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000013305 - Anopheles gambiae
str. PEST
Length = 477
Score = 90.2 bits (214), Expect = 4e-17
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = +2
Query: 509 HSGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSETP 664
HSGRRPSG+CGAALL+AAR+H+FSRTP+DIVRIVK+HESTLRK ETP
Sbjct: 38 HSGRRPSGLCGAALLLAARMHDFSRTPNDIVRIVKIHESTLRKRLFEFGETP 89
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/43 (65%), Positives = 36/43 (83%)
Frame = +3
Query: 399 PCLYILRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
PC+YI+R+A++L+F++K HEVSMTA RL QRMKKDSI G P
Sbjct: 1 PCIYIMRYANKLEFKEKTHEVSMTAQRLVQRMKKDSIHSGRRP 43
>UniRef50_Q4PHC2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 765
Score = 87.4 bits (207), Expect = 3e-16
Identities = 41/91 (45%), Positives = 58/91 (63%)
Frame = +3
Query: 255 CVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFASQL 434
C+Y+ CR E T H+LID +DA+ + + LGR+Y KL R L + +P DP +YI RFA+ L
Sbjct: 141 CLYVACRMEKTTHMLIDFADAIQVNVFILGRSYLKLIRVLNLRLPLIDPSIYIARFAALL 200
Query: 435 KFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
F ++ +V+ A RL R +KD IT G P
Sbjct: 201 DFGEETQKVAYDASRLVSRFQKDWITEGRRP 231
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/81 (32%), Positives = 50/81 (61%)
Frame = +2
Query: 431 VEIRRQTTRGQHDCTQTGSANEEGLHHSGRRPSGICGAALLIAARLHEFSRTPSDIVRIV 610
++ +T + +D ++ S ++ GRRP+GICGA L++AAR++ F R+ S+++++V
Sbjct: 200 LDFGEETQKVAYDASRLVSRFQKDWITEGRRPAGICGACLMLAARMNHFRRSVSEVIQVV 259
Query: 611 KVHESTLRKTACSNSETPPFQ 673
K+ + TL+ +TP Q
Sbjct: 260 KIADVTLKARLEEFKKTPTGQ 280
>UniRef50_Q1JSU6 Cluster: Transcription factor IIIb subunit,
putative; n=1; Toxoplasma gondii|Rep: Transcription
factor IIIb subunit, putative - Toxoplasma gondii
Length = 644
Score = 87.0 bits (206), Expect = 4e-16
Identities = 41/93 (44%), Positives = 55/93 (59%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFAS 428
S C+Y CR E TPHLLID D + LG+ + KL R L + +P DP L++ RFA
Sbjct: 115 SACLYAICRRERTPHLLIDFCDVLRTNVRALGQVFMKLLRVLHLQVPHVDPSLFLERFAC 174
Query: 429 QLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
Q++ DK H V+ T +RL Q M +D I+ G P
Sbjct: 175 QMQLGDKTHTVAQTGVRLIQAMNRDWISTGRRP 207
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = +2
Query: 464 HDCTQTGSANEEGLHH----SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTL 631
H QTG + ++ +GRRP G+CGAALLIAAR H F DI IV+V T+
Sbjct: 183 HTVAQTGVRLIQAMNRDWISTGRRPMGLCGAALLIAARYHNFQMNAEDIAHIVRVSGPTV 242
Query: 632 RK 637
+
Sbjct: 243 NR 244
Score = 51.6 bits (118), Expect = 2e-05
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Frame = +1
Query: 1 GASAIGQFVSADTKGGATGFGRAFNAGI--GQESKEITLRKARIGITALCQQLRL-NQQC 171
G S +GQFVS+ TG GR AG+ G +S+E TL++ I ++ ++LRL +QQ
Sbjct: 34 GVSMVGQFVSS-----CTGAGRGLRAGVGGGGDSREQTLQRGFNNIQSIAERLRLSSQQH 88
Query: 172 IDIACNFYKMALSRHLTIGR 231
I A Y MA R+ T+GR
Sbjct: 89 ISSAHRLYLMATQRNFTLGR 108
>UniRef50_Q92994-4 Cluster: Isoform 4 of Q92994 ; n=2; Homo
sapiens|Rep: Isoform 4 of Q92994 - Homo sapiens (Human)
Length = 242
Score = 86.2 bits (204), Expect = 7e-16
Identities = 43/85 (50%), Positives = 55/85 (64%)
Frame = +1
Query: 1 GASAIGQFVSADTKGGATGFGRAFNAGIGQESKEITLRKARIGITALCQQLRLNQQCIDI 180
G+SA+GQFVS D G G F+ +G+ES+ TL+ R I L QL+LNQ C+D
Sbjct: 50 GSSAVGQFVSLDGAGKTPTLGGGFHVNLGKESRAQTLQNGRRHIHHLGNQLQLNQHCLDT 109
Query: 181 ACNFYKMALSRHLTIGRPVTHTQAA 255
A NF+KMA+SRHLT GR + H AA
Sbjct: 110 AFNFFKMAVSRHLTRGRKMAHVIAA 134
Score = 42.3 bits (95), Expect = 0.011
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSD 314
+ C+Y+ CRTEGTPH+L+D+SD
Sbjct: 133 AACLYLVCRTEGTPHMLLDLSD 154
>UniRef50_Q8SRY7 Cluster: TRANSCRIPTION INITIATION FACTOR TFIII B
SUBUNIT; n=1; Encephalitozoon cuniculi|Rep:
TRANSCRIPTION INITIATION FACTOR TFIII B SUBUNIT -
Encephalitozoon cuniculi
Length = 395
Score = 86.2 bits (204), Expect = 7e-16
Identities = 41/93 (44%), Positives = 63/93 (67%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFAS 428
S C+Y+ CR E TPH+L+D S+A+ + +++G+++ K++ L I+IP DP LY+ RF S
Sbjct: 117 SACIYIVCRQERTPHMLMDFSNALHIDVFKIGKSFLKITNMLGIDIPLIDPSLYMPRFVS 176
Query: 429 QLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
+L+FE +EV +LRL RMK+D I G P
Sbjct: 177 RLRFE--SNEVLGLSLRLISRMKRDWIVVGRRP 207
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +2
Query: 515 GRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRK 637
GRRP+ +CGAALLIA+R+ R+ +I +IV V ST+ K
Sbjct: 204 GRRPNNLCGAALLIASRIVGEERSIYEIAKIVHVSVSTINK 244
>UniRef50_Q5CRA9 Cluster: Cyclin domain protein; n=2;
Cryptosporidium|Rep: Cyclin domain protein -
Cryptosporidium parvum Iowa II
Length = 648
Score = 84.2 bits (199), Expect = 3e-15
Identities = 38/93 (40%), Positives = 58/93 (62%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFAS 428
S C+Y CR E TPH+LID SD + LG+ + KL R L +++P DP +++ RFA+
Sbjct: 129 SACLYAICRREKTPHMLIDFSDVLQTPVKVLGQVFMKLLRLLRLHVPNIDPSMFMERFAA 188
Query: 429 QLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
Q+K +K H V+ T +R+ Q + ++ IT G P
Sbjct: 189 QMKLGEKTHAVAATGVRIVQALTRNWITTGRRP 221
Score = 50.0 bits (114), Expect = 6e-05
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSETPPFQ 673
+GRRP+G+CGAALLI+AR H + S+I +IV++ TL K T Q
Sbjct: 217 TGRRPTGLCGAALLISARYHGIPVSSSEIAQIVRISSPTLLKRLAEFKHTSTAQ 270
Score = 39.1 bits (87), Expect = 0.10
Identities = 25/81 (30%), Positives = 39/81 (48%)
Frame = +1
Query: 13 IGQFVSADTKGGATGFGRAFNAGIGQESKEITLRKARIGITALCQQLRLNQQCIDIACNF 192
+G FV + G GF + +ES+E L++ + + QLRL+ I+ A
Sbjct: 56 VGHFVPSS---GVRGFAMVYG---NRESREHVLQRGYHNLQRIADQLRLSSSHIESAQRV 109
Query: 193 YKMALSRHLTIGRPVTHTQAA 255
+ MA+ R TIGR H +A
Sbjct: 110 FLMAVQRSFTIGRNNMHVASA 130
>UniRef50_Q9P6R0 Cluster: Transcription factor IIIB 60 kDa subunit;
n=1; Schizosaccharomyces pombe|Rep: Transcription factor
IIIB 60 kDa subunit - Schizosaccharomyces pombe (Fission
yeast)
Length = 500
Score = 82.6 bits (195), Expect = 8e-15
Identities = 40/91 (43%), Positives = 55/91 (60%)
Frame = +3
Query: 255 CVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFASQL 434
C+Y+ CR T H+LID SD + + ++LG + KL R L N+P DP LYI RFAS L
Sbjct: 139 CLYIVCRISKTSHMLIDFSDILQINVFKLGSTFLKLCRVLRPNLPLLDPSLYISRFASLL 198
Query: 435 KFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
+F + H V+ A+RL RM +D + G P
Sbjct: 199 EFGPETHRVANDAIRLVARMNRDWMQIGRRP 229
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/69 (39%), Positives = 42/69 (60%)
Frame = +2
Query: 431 VEIRRQTTRGQHDCTQTGSANEEGLHHSGRRPSGICGAALLIAARLHEFSRTPSDIVRIV 610
+E +T R +D + + GRRP+GICGA LLIAAR++ F R+ ++V +V
Sbjct: 198 LEFGPETHRVANDAIRLVARMNRDWMQIGRRPAGICGACLLIAARMNNFRRSVREVVHVV 257
Query: 611 KVHESTLRK 637
KV + T++K
Sbjct: 258 KVADITIQK 266
Score = 40.7 bits (91), Expect = 0.034
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 1 GASAI-GQFVSADTKGGATGFGRAFNAGIGQESKEITLRKARIGITALCQQLRLNQQCID 177
GA+ + G VS D T G N G ES+E+T+ R I+AL L+LN++ I+
Sbjct: 54 GAAVVQGSLVSNDQTHARTFGGPYRNQG-SVESRELTIANGRRRISALAIALKLNERHIE 112
Query: 178 IACNFYKMALSRHLTIGR 231
A ++ +A++ + GR
Sbjct: 113 AAVRYFTLAINNNFIKGR 130
>UniRef50_Q4S6G3 Cluster: Chromosome 10 SCAF14728, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 10
SCAF14728, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 161
Score = 82.2 bits (194), Expect = 1e-14
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 GAS-AIGQFVSADTKGGATGFGRAFNAGIGQESKEITLRKARIGITALCQQLRLNQQCID 177
GAS A+G+FVS++ G FG + IG ES+ TL +AR I L QL++N+ C+D
Sbjct: 49 GASHAVGRFVSSEAGGAVMSFGDSHLGNIGAESRAQTLARARNSINTLGVQLQMNKHCLD 108
Query: 178 IACNFYKMALSRHLTIGRPVTHTQAA 255
A NFYKMAL++HLT GR +H AA
Sbjct: 109 TAFNFYKMALTKHLTRGRKASHVIAA 134
Score = 33.5 bits (73), Expect = 5.1
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLL 299
+ C+YM CRTEGTP +L
Sbjct: 133 AACIYMVCRTEGTPRIL 149
>UniRef50_A5DLD8 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 539
Score = 81.0 bits (191), Expect = 3e-14
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCI-NIPPTDPCLYILRFA 425
+ C+Y+ CR E TPH+LID S + + Y LG + K+ RAL I N+P DP L+I FA
Sbjct: 131 AACLYVACRKEKTPHMLIDFSSRLQISVYSLGATFLKMVRALHITNLPLADPSLFIQHFA 190
Query: 426 SQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
+L F D +V A++L QRM D I G P
Sbjct: 191 ERLDFGDLLTKVIKDAVKLAQRMANDWIHEGRRP 224
Score = 50.0 bits (114), Expect = 6e-05
Identities = 20/43 (46%), Positives = 32/43 (74%)
Frame = +2
Query: 509 HSGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRK 637
H GRRP+G+ GA +L+AAR++ F R+ ++IV + V E TL++
Sbjct: 219 HEGRRPAGVAGACVLLAARMNNFRRSHAEIVAVAHVAEETLQR 261
>UniRef50_Q4UC65 Cluster: Genomic DNA chromosome 3; n=3;
Piroplasmida|Rep: Genomic DNA chromosome 3 - Theileria
annulata
Length = 531
Score = 79.8 bits (188), Expect = 6e-14
Identities = 39/93 (41%), Positives = 56/93 (60%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFAS 428
SCC+Y CR E TPHLLID SD + +G+ + KL R L I++P DP ++ RFA+
Sbjct: 127 SCCLYTICRRERTPHLLIDFSDVLLTPVKTIGQIFMKLVRMLHISVPNIDPSIFFERFAT 186
Query: 429 QLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
QL+ +D H++ T R+ Q M +D + G P
Sbjct: 187 QLQLKD-IHKIINTGNRIIQAMNRDWLCTGRRP 218
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRK 637
+GRRP+G+CGAALL+AAR H S + + +V++ T+ K
Sbjct: 214 TGRRPTGLCGAALLVAARFHGISLSAESVSSVVRISHPTILK 255
Score = 32.7 bits (71), Expect = 9.0
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 94 SKEITLRKARIGITALCQQLRLNQQCIDIACNFYKMALSRHLTIGRPVTH 243
S+E + + I + + LRL+ ID A Y +A+ R+ T+GR H
Sbjct: 75 SREQVINRGNENIKKIAEALRLSPHHIDAAKRIYLLAVQRNFTMGRNNLH 124
>UniRef50_Q4T2A5 Cluster: Chromosome undetermined SCAF10300, whole
genome shotgun sequence; n=3; Eumetazoa|Rep: Chromosome
undetermined SCAF10300, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 165
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/84 (47%), Positives = 53/84 (63%)
Frame = +1
Query: 4 ASAIGQFVSADTKGGATGFGRAFNAGIGQESKEITLRKARIGITALCQQLRLNQQCIDIA 183
+SA+GQFVSAD A G F+ +G+ES+ TL+ + I L QL+LNQ C+D A
Sbjct: 51 SSAVGQFVSADGPVKAPLLGSGFHTSVGKESRAQTLQGGKRQIQHLGSQLQLNQHCLDTA 110
Query: 184 CNFYKMALSRHLTIGRPVTHTQAA 255
NF+KM +S+HLT GR H AA
Sbjct: 111 FNFFKMVVSKHLTRGRKTEHVIAA 134
>UniRef50_Q9AVY2 Cluster: TFIIB related factor hBRF; n=1; Guillardia
theta|Rep: TFIIB related factor hBRF - Guillardia theta
(Cryptomonas phi)
Length = 394
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/95 (40%), Positives = 58/95 (61%)
Frame = +3
Query: 243 YPSCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRF 422
Y C+YM R E TPHLL+D SD + ++G + K+S+ L + IP DPC++I RF
Sbjct: 115 YIISCLYMISRFEKTPHLLVDFSDISQIRTNKIGVEFLKISKNLKMEIPIIDPCIFIHRF 174
Query: 423 ASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
AS+L K ++ +ALR+ RMK++ ++ G P
Sbjct: 175 ASRLLLGKKSGKIITSALRIIARMKRNWLSTGRRP 209
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLR 634
+GRRPS +CG ALLIA+R++ FS +I +IV+V +L+
Sbjct: 205 TGRRPSSLCGVALLIASRMYGFSIDTKEISKIVRVGHLSLK 245
>UniRef50_UPI00004997AD Cluster: transcription initiation factor
IIIB chain BRF; n=1; Entamoeba histolytica
HM-1:IMSS|Rep: transcription initiation factor IIIB
chain BRF - Entamoeba histolytica HM-1:IMSS
Length = 546
Score = 77.8 bits (183), Expect = 2e-13
Identities = 37/91 (40%), Positives = 54/91 (59%)
Frame = +3
Query: 255 CVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFASQL 434
C+Y+ CR E + HLLID +D + + +LGR + + L ++P DPCLY+ RF L
Sbjct: 132 CLYIICRRERSDHLLIDFADVLHVSVRRLGRTFIRFCEELKFDLPFVDPCLYLQRFGEDL 191
Query: 435 KFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
FE K +V TA+R+ QRM +D + G P
Sbjct: 192 SFE-KTGDVVRTAMRICQRMNRDWMHYGRRP 221
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/48 (50%), Positives = 34/48 (70%)
Frame = +2
Query: 491 NEEGLHHSGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLR 634
N + +H+ GRRPSGICG AL +A RLH RT +IV +V++ +T+R
Sbjct: 211 NRDWMHY-GRRPSGICGVALYLAGRLHGEPRTLEEIVHVVRLSTTTVR 257
>UniRef50_Q54U85 Cluster: Transcription factor IIIB; n=1;
Dictyostelium discoideum AX4|Rep: Transcription factor
IIIB - Dictyostelium discoideum AX4
Length = 706
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/93 (39%), Positives = 57/93 (61%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFAS 428
+ C+Y+ CR E TPHLLID S+ + + + + + +L + L I +P DP +I RFAS
Sbjct: 121 AACLYIVCRRERTPHLLIDFSENLQVNVFIVAGTFLQLIKLLNIQLPIVDPSFFIQRFAS 180
Query: 429 QLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
L+F D+ +V TA +L RMK+D ++ G P
Sbjct: 181 ALEFGDQTKDVIATANKLVARMKRDWMSIGRKP 213
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +2
Query: 515 GRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSETP 664
GR+PSGICGA+L IA+++H F R+ +IV +VK+ E TL +TP
Sbjct: 210 GRKPSGICGASLYIASKIHGFKRSMKEIVHVVKIGEQTLINRLDEFRKTP 259
>UniRef50_P43072 Cluster: Transcription factor IIIB 70 kDa subunit;
n=5; Saccharomycetales|Rep: Transcription factor IIIB 70
kDa subunit - Candida albicans (Yeast)
Length = 553
Score = 76.6 bits (180), Expect = 6e-13
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Frame = +3
Query: 204 LIQTFDYRQAGNTYPSCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCI- 380
L F + N + C+Y+ CR E T H+LID S + + Y LG + K+ +AL I
Sbjct: 120 LTLNFVQGRRSNNVLATCLYVACRKERTHHMLIDFSSRLQISVYSLGATFLKMVKALHIT 179
Query: 381 NIPPTDPCLYILRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
++P DP L+I F +L F+DK +V+ A++L RM D I G P
Sbjct: 180 SLPLADPSLFIQHFVEKLDFKDKATKVAKDAVKLAHRMAADWIHEGRRP 228
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +2
Query: 509 HSGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRK 637
H GRRP+GI GA +L+AAR++ F R+ ++IV + V E TL++
Sbjct: 223 HEGRRPAGIAGACVLLAARMNNFRRSHAEIVAVSHVGEETLQR 265
>UniRef50_Q8IKY2 Cluster: Transcription factor IIIb subunit,
putative; n=3; Plasmodium|Rep: Transcription factor IIIb
subunit, putative - Plasmodium falciparum (isolate 3D7)
Length = 748
Score = 75.8 bits (178), Expect = 1e-12
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Frame = +3
Query: 237 NTYPSC-CVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYI 413
N+Y + C+Y CR E +P +LID SD + LG+ + KL R L IN+P DP L++
Sbjct: 134 NSYVAASCLYTICRREKSPIMLIDFSDILQTPVKPLGKTFLKLLRLLHINVPNIDPSLFL 193
Query: 414 LRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
RFA +L ++ ++V+ T ++L Q M +D I+ G P
Sbjct: 194 ERFAHKLNLKNDIYKVTYTGIKLIQAMTRDWISTGRRP 231
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTL--RKTACSNSETPPFQGPEP 685
+GRRP+G+CGAALLI+ R+H + I IV++ T+ R N+ T + E
Sbjct: 227 TGRRPTGLCGAALLISTRMHGICINSNTIADIVRISNPTIIKRLAEFKNTSTAQIKASEF 286
Query: 686 SKSSM 700
K S+
Sbjct: 287 DKISI 291
Score = 44.4 bits (100), Expect = 0.003
Identities = 29/83 (34%), Positives = 46/83 (55%)
Frame = +1
Query: 7 SAIGQFVSADTKGGATGFGRAFNAGIGQESKEITLRKARIGITALCQQLRLNQQCIDIAC 186
S +GQF+ + G F + GI +ES+EI+L+K + I + L L+ Q I+ A
Sbjct: 64 SMVGQFIPSS---GNKSF--ILSWGI-RESREISLQKGYVNIQKIADHLHLSSQHIEAAQ 117
Query: 187 NFYKMALSRHLTIGRPVTHTQAA 255
Y MAL R+ T+GR ++ A+
Sbjct: 118 RIYLMALQRNFTMGRNNSYVAAS 140
>UniRef50_A5K3R6 Cluster: Transcription factor IIIb subunit,
putative; n=1; Plasmodium vivax|Rep: Transcription
factor IIIb subunit, putative - Plasmodium vivax
Length = 826
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +3
Query: 237 NTYPSC-CVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYI 413
N+Y + C+Y CR E +P +LID SD + LG+ + KL R L I++P DP LY+
Sbjct: 124 NSYVAASCLYTICRREKSPVMLIDFSDILQTPVKPLGKTFLKLLRLLHISVPNIDPSLYL 183
Query: 414 LRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
RFA +L ++ ++V+ T ++L Q M +D I G P
Sbjct: 184 ERFAHKLNLKNAIYKVTYTGIKLIQAMTRDWICTGRRP 221
Score = 44.4 bits (100), Expect = 0.003
Identities = 29/83 (34%), Positives = 46/83 (55%)
Frame = +1
Query: 7 SAIGQFVSADTKGGATGFGRAFNAGIGQESKEITLRKARIGITALCQQLRLNQQCIDIAC 186
S +GQFV A G F + G+ +ES+E++L+K I I + L L+ Q ++ A
Sbjct: 54 SMVGQFVPAS---GNKSF--ILSWGV-RESRELSLQKGYINIQKIADHLHLSTQHVEAAQ 107
Query: 187 NFYKMALSRHLTIGRPVTHTQAA 255
Y MAL R+ T+GR ++ A+
Sbjct: 108 RIYLMALQRNFTMGRNNSYVAAS 130
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRK 637
+GRRP+G+CGAALLI+ R+H + I IV++ T+ K
Sbjct: 217 TGRRPTGLCGAALLISTRMHGIFIHSNTIANIVRISNPTIIK 258
>UniRef50_P29056 Cluster: Transcription factor IIIB 70 kDa subunit;
n=5; Saccharomycetales|Rep: Transcription factor IIIB 70
kDa subunit - Saccharomyces cerevisiae (Baker's yeast)
Length = 596
Score = 73.7 bits (173), Expect = 4e-12
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Frame = +3
Query: 225 RQAGNTYPSCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCIN-IPPTDP 401
R++ N SC +Y+ CR E T H+LID S + + Y +G + K+ + L I +P DP
Sbjct: 120 RRSQNVIASC-LYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPLADP 178
Query: 402 CLYILRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
L+I FA +L DK+ +V A++L QRM KD + G P
Sbjct: 179 SLFIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRP 220
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +2
Query: 515 GRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRK 637
GRRP+GI GA +L+A R++ RT ++IV + V E TL++
Sbjct: 217 GRRPAGIAGACILLACRMNNLRRTHTEIVAVSHVAEETLQQ 257
>UniRef50_Q7R8B0 Cluster: Transcription factor iiib 70 kDa subunit;
n=2; Plasmodium yoelii yoelii|Rep: Transcription factor
iiib 70 kDa subunit - Plasmodium yoelii yoelii
Length = 756
Score = 73.3 bits (172), Expect = 5e-12
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Frame = +3
Query: 237 NTYPSC-CVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYI 413
N+Y + C+Y CR E +P +LID SD + LG+ + KL R L I++P DP L++
Sbjct: 120 NSYVAASCLYTICRREKSPIMLIDFSDILQTPVKPLGKTFLKLLRLLHISVPNIDPSLFL 179
Query: 414 LRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
RFA +L ++ ++V+ T ++L Q M +D I+ G P
Sbjct: 180 ERFAYKLNLKNDIYKVTYTGIKLIQAMTRDWISTGRRP 217
Score = 45.6 bits (103), Expect = 0.001
Identities = 30/83 (36%), Positives = 47/83 (56%)
Frame = +1
Query: 7 SAIGQFVSADTKGGATGFGRAFNAGIGQESKEITLRKARIGITALCQQLRLNQQCIDIAC 186
S +GQF+ + G F ++ GI +ES+EI+L+K I I + L L+ Q I+ A
Sbjct: 50 SMVGQFIPSS---GTKSFMLSW--GI-RESREISLQKGYINIQKIADNLHLSNQHIEAAQ 103
Query: 187 NFYKMALSRHLTIGRPVTHTQAA 255
Y MAL R+ T+GR ++ A+
Sbjct: 104 RIYLMALQRNFTMGRNNSYVAAS 126
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/42 (42%), Positives = 29/42 (69%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRK 637
+GRRP+G+CGA+LLIA R+H + + I +V++ T+ K
Sbjct: 213 TGRRPTGLCGASLLIATRIHGINVNSNTIAEVVRISNPTIIK 254
>UniRef50_Q4T2A7 Cluster: Chromosome undetermined SCAF10300, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10300,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 446
Score = 72.9 bits (171), Expect = 7e-12
Identities = 31/55 (56%), Positives = 42/55 (76%)
Frame = +2
Query: 509 HSGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSETPPFQ 673
H+GRRPSG+CGAALL+AAR+H+F RT D++ +VKV ++TLRK +TP Q
Sbjct: 16 HTGRRPSGLCGAALLVAARMHKFRRTVKDVISVVKVCQTTLRKRLTEFEDTPTSQ 70
>UniRef50_P46070 Cluster: Transcription factor IIIB 70 kDa subunit;
n=1; Kluyveromyces lactis|Rep: Transcription factor IIIB
70 kDa subunit - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 556
Score = 72.5 bits (170), Expect = 9e-12
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRAL-CINIPPTDPCLYILRFA 425
+ C+Y+ CR E T H+LID S + + Y +G + KL++ L + +P DP L+I FA
Sbjct: 138 AACLYIACRKERTHHMLIDFSSRLQVSVYSIGATFLKLAKKLQIVKLPLADPSLFIQHFA 197
Query: 426 SQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
+L+ DK+ +V A++L Q M +D + G P
Sbjct: 198 EKLELGDKKIKVIRDAVKLAQTMSRDWMYEGRRP 231
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +2
Query: 509 HSGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRK 637
+ GRRP+GI GA LL+A R++ RT S+IV I V E TL++
Sbjct: 226 YEGRRPAGIAGACLLLACRMNNLRRTHSEIVAISHVAEETLQQ 268
>UniRef50_Q00X13 Cluster: Transcription factor IIB; n=2;
Ostreococcus|Rep: Transcription factor IIB -
Ostreococcus tauri
Length = 728
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Frame = +3
Query: 255 CVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINI-----PPTDPCLYILR 419
C+Y+ CR E P++LID +D + Y LG + +L R L + P DP L+I R
Sbjct: 137 CLYIICRQESRPYMLIDFADVLQTNVYVLGAVFLQLCRLLRLEQHPLMQKPIDPSLFIHR 196
Query: 420 FASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
FA +L + H V+ TALRL MK+D + G P
Sbjct: 197 FADKLSLGRRMHTVANTALRLVASMKRDWMQTGRRP 232
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSETP 664
+GRRP+GICGAAL +AA +H F+ + D+V +V V E+TL+K TP
Sbjct: 228 TGRRPNGICGAALWVAAHIHGFNPSKRDVVAVVHVGEATLKKRLSEFENTP 278
>UniRef50_Q6C4S8 Cluster: Similar to sp|P29056 Saccharomyces
cerevisiae YGR246c BRF1 TFIIIB subunit; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P29056 Saccharomyces
cerevisiae YGR246c BRF1 TFIIIB subunit - Yarrowia
lipolytica (Candida lipolytica)
Length = 512
Score = 68.5 bits (160), Expect = 1e-10
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCI-NIPPTDPCLYILRFA 425
S C+Y+ CR E +LID +D + + +G Y +L + L I N+P DP +YI RFA
Sbjct: 121 SACLYVACRRELRHEMLIDFADKLFCNVFAIGTTYLQLLKTLDIKNLPLIDPSIYIQRFA 180
Query: 426 SQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
S+L F D V A+RL QRM +D + G P
Sbjct: 181 SKLDF-DNAKNVRNDAVRLVQRMGRDYLVEGRRP 213
Score = 41.9 bits (94), Expect = 0.015
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +2
Query: 515 GRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRK 637
GRRP+GI AALL+AAR++ R+ + I KV E TL++
Sbjct: 210 GRRPAGIAAAALLLAARMNNQRRSKTQIAFYAKVAEETLQR 250
Score = 37.9 bits (84), Expect = 0.24
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +1
Query: 1 GASAI-GQFVSADTKGGATGFGRAFNAGIGQESKEITLRKARIGITALCQQLRLNQQCID 177
GA+ + G FV AD G N ES+E+TL+K + ITAL + + Q I+
Sbjct: 44 GAAVVHGSFVGADQSG-------IRNNNFHGESRELTLQKGKNRITALAHAMDIPQHIIE 96
Query: 178 IACNFYKMALSRHLTIGR 231
A ++ +A++++ GR
Sbjct: 97 KAHRYFVLAVTKNFVKGR 114
>UniRef50_UPI00006CFA73 Cluster: Transcription factor TFIIB repeat
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Transcription factor TFIIB repeat family protein -
Tetrahymena thermophila SB210
Length = 582
Score = 66.5 bits (155), Expect = 6e-10
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Frame = +3
Query: 243 YPSCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINI------PPTDPC 404
Y + +Y+ R + P LL+D S+ + + ++L R Y KL++ L + + P DP
Sbjct: 125 YSAAALYIALRFQKAPFLLMDFSEKLCINLFKLARCYRKLAKFLNVTLKLNERLPSIDPS 184
Query: 405 LYILRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
+YI RF L+F DK +V TA++L +RMK D ++ G P
Sbjct: 185 IYIPRFCKMLEFNDKVDQVKETAIKLLKRMKLDWMSHGRRP 225
Score = 60.1 bits (139), Expect = 5e-08
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +2
Query: 515 GRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSET 661
GRRPS +CGAA+LIAAR+H F RT S++ ++V V E TLRK ET
Sbjct: 222 GRRPSSLCGAAILIAARMHGFKRTTSEVCKVVYVCEETLRKRLEEFKET 270
>UniRef50_Q5KFT1 Cluster: Transcription factor iiib 70 kd subunit,
putative; n=2; Filobasidiella neoformans|Rep:
Transcription factor iiib 70 kd subunit, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 691
Score = 66.1 bits (154), Expect = 8e-10
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Frame = +3
Query: 255 CVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCI--NIPPTDPCLYILRFAS 428
C+Y+ CR + H+LID S+ + ++LG Y KL L + +P DP +Y LRFA
Sbjct: 132 CLYLQCRLKKDAHMLIDFSEHKGINVFELGATYLKLRSTLNLLDPMPEVDPAIYNLRFAH 191
Query: 429 QLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
+L F + + V+ A RL +R + D +T+G P
Sbjct: 192 RLNFGAQVNTVAADASRLVRRFRADWMTQGRRP 224
Score = 60.1 bits (139), Expect = 5e-08
Identities = 23/49 (46%), Positives = 36/49 (73%)
Frame = +2
Query: 515 GRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSET 661
GRRP+G+CGA L+IA R+ F RTP ++ ++VKVH +T++K ++T
Sbjct: 221 GRRPAGVCGACLIIAGRMSNFLRTPDEVAQVVKVHPNTIKKRLLEFAQT 269
>UniRef50_Q2H1N9 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 775
Score = 65.3 bits (152), Expect = 1e-09
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Frame = +3
Query: 237 NTYPSCCVYMTCRTEGTPH-LLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLY- 410
NT + CVY CR E +LID++D + + LGR+Y L AL T P +
Sbjct: 181 NTVAAVCVYAVCRKEDNNKVMLIDLADIIKTDVFLLGRSYKDLLAALPDMKDGTKPIIIE 240
Query: 411 --ILRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
I RFA++L+F ++V+++A+R+ QRM+ D+IT G P
Sbjct: 241 DLIFRFATKLEFLHDTNKVALSAIRIAQRMRHDNITHGRRP 281
Score = 52.8 bits (121), Expect = 8e-06
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +2
Query: 515 GRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRK 637
GRRP+GICGAAL++AAR H + RT ++V I KV +TL++
Sbjct: 278 GRRPAGICGAALIMAARAHNYRRTVREVVYIAKVTMTTLQE 318
>UniRef50_Q4S6G5 Cluster: Chromosome 10 SCAF14728, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 10 SCAF14728, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 138
Score = 63.3 bits (147), Expect = 6e-09
Identities = 33/63 (52%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Frame = +3
Query: 348 AYFKLSRALCIN---IPPTDPCLYILRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRG 518
+YF+LS N DPCLYI RFA L+F +K HEVSMTA+RL QRMK+D + G
Sbjct: 57 SYFQLSTRPLFNQSHFKDLDPCLYIPRFAQMLEFGEKNHEVSMTAMRLVQRMKRDWMHTG 116
Query: 519 EDP 527
P
Sbjct: 117 RRP 119
>UniRef50_A6R8J6 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 818
Score = 60.5 bits (140), Expect = 4e-08
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Frame = +3
Query: 240 TYPSCCVYMTCRTE-GTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCIN-----IPPTDP 401
T + C+Y+ CR + G +LID +D + + ++LGRAY L L + + P DP
Sbjct: 177 TVAAVCLYIACRRQDGNTVMLIDFADVLMINVFKLGRAYKALLDELRLGGNVFIMNPIDP 236
Query: 402 CLYILRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
I RFA QL+F +V+ A+R+ QRM +D + G P
Sbjct: 237 ESLIYRFAKQLEFGSSMMQVASEAVRIVQRMNRDWMITGRRP 278
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/42 (54%), Positives = 34/42 (80%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRK 637
+GRRP+GICGAAL++AAR++ F RT ++V +VKV E T+ +
Sbjct: 274 TGRRPAGICGAALILAARMNNFRRTIREVVYVVKVTELTIHQ 315
Score = 39.1 bits (87), Expect = 0.10
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 GASAI-GQFVSADTKGGATGFGRAFNAGIGQESKEITLRKARIGITALCQQLRLNQQCID 177
GA+ + G FV A G + FG F G G ES+EIT + I L + L + +
Sbjct: 97 GAAVVQGTFVGAGQSYGRS-FGPGFQRGGGMESREITEQNGNRYIAQLSRALNVPESATK 155
Query: 178 IACNFYKMALSRHLTIGRPVTHTQAAV 258
A +K+A+ + GR T T AAV
Sbjct: 156 AAGQVFKLAVGLNFIQGRR-TKTVAAV 181
>UniRef50_A7QRG5 Cluster: Chromosome chr8 scaffold_150, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_150, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 422
Score = 59.7 bits (138), Expect = 7e-08
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCIN-----IPPTDPCLYI 413
+ C+Y+ CR P LLID S+ + + Y LG + +L + L + P DP L+I
Sbjct: 120 AACLYIACRENKKPFLLIDFSEHLRINVYVLGAVFLQLCKLLSLEEHPIVQKPVDPSLFI 179
Query: 414 LRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
RFA+ L E VS TALR+ MK+D + G P
Sbjct: 180 HRFAAGLPGETNM-GVSKTALRIIASMKRDWLQTGRKP 216
Score = 46.0 bits (104), Expect = 9e-04
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRK 637
+GR+PSG+CGAAL I+A + + +DIV+IV + E+TL K
Sbjct: 212 TGRKPSGLCGAALYISALSYGLKCSKTDIVKIVHICEATLTK 253
>UniRef50_A1D6E9 Cluster: Transcription factor TFIIIB complex
subunit Brf1, putative; n=4; Trichocomaceae|Rep:
Transcription factor TFIIIB complex subunit Brf1,
putative - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 752
Score = 59.7 bits (138), Expect = 7e-08
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Frame = +3
Query: 240 TYPSCCVYMTCRTE-GTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCIN-----IPPTDP 401
T + C+Y+ CR + G +LID +D + + ++LGR Y L L + + P DP
Sbjct: 183 TVAAVCLYIACRRQDGNTVMLIDFADVLMVNVFKLGRTYKALLDELRLGGNVFLMNPIDP 242
Query: 402 CLYILRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
I RFA QL+F +V+ A+R+ QRM +D +T G P
Sbjct: 243 ESLIYRFAKQLEFGTATMQVASEAVRIVQRMNRDWMTTGRRP 284
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSET 661
+GRRP+GICGAAL++AAR++ F RT ++V +VKV E T+ + S T
Sbjct: 280 TGRRPAGICGAALILAARMNNFRRTVREVVYVVKVTEITINQRLNEFSST 329
>UniRef50_A1CL18 Cluster: Transcription factor TFIIIB complex
subunit Brf1, putative; n=5; cellular organisms|Rep:
Transcription factor TFIIIB complex subunit Brf1,
putative - Aspergillus clavatus
Length = 755
Score = 59.7 bits (138), Expect = 7e-08
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Frame = +3
Query: 240 TYPSCCVYMTCRTE-GTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCIN-----IPPTDP 401
T + C+Y+ CR + G +LID +D + + ++LGR Y L L + + P DP
Sbjct: 183 TVAAVCLYIACRRQDGNTVMLIDFADVLMVNVFKLGRTYKALLDELRLGGNVFLMNPIDP 242
Query: 402 CLYILRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
I RFA QL+F +V+ A+R+ QRM +D +T G P
Sbjct: 243 ESLIYRFAKQLEFGTATMQVASEAVRIVQRMNRDWMTTGRRP 284
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSET 661
+GRRP+GICGAAL++AAR++ F RT ++V +VKV E T+ + S T
Sbjct: 280 TGRRPAGICGAALILAARMNNFRRTVREVVYVVKVTEITINQRLNEFSST 329
>UniRef50_Q0DJB2 Cluster: Os05g0305100 protein; n=3; Oryza
sativa|Rep: Os05g0305100 protein - Oryza sativa subsp.
japonica (Rice)
Length = 574
Score = 57.6 bits (133), Expect = 3e-07
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPT-----DPCLYI 413
+ C+Y+ CR +LLID SD + + Y LG + +L + L + P DP L+I
Sbjct: 120 AACLYIACRQSKKAYLLIDFSDHLQISVYVLGAVFLQLCQVLLLAEHPVIQKLIDPSLFI 179
Query: 414 LRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
RF +L + + VS TALR+ MK+D + G P
Sbjct: 180 HRFTERL-LGKRDNAVSDTALRIVASMKRDWMQTGRKP 216
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRK 637
+GR+PSG+CGAAL IAA H + T +DIV +V V E+TL K
Sbjct: 212 TGRKPSGLCGAALYIAALSHGYDYTKADIVAVVHVCEATLTK 253
>UniRef50_Q8ZWS3 Cluster: Transcription initiation factor IIB; n=14;
Thermoprotei|Rep: Transcription initiation factor IIB -
Pyrobaculum aerophilum
Length = 333
Score = 56.8 bits (131), Expect = 5e-07
Identities = 34/93 (36%), Positives = 47/93 (50%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFAS 428
+ +YM CR P L ++ ++ R Y L R L + +P +DP LYI R A
Sbjct: 191 AAALYMACRMMKMPRPLDELVRYTKASRREVARCYRLLLRELNVKVPISDPILYISRIAE 250
Query: 429 QLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
QLK EV TA+ + Q+ KK IT G+DP
Sbjct: 251 QLKLSG---EVVKTAIDILQKAKKAGITAGKDP 280
>UniRef50_UPI000023CB24 Cluster: hypothetical protein FG04004.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG04004.1 - Gibberella zeae PH-1
Length = 762
Score = 56.4 bits (130), Expect = 6e-07
Identities = 28/68 (41%), Positives = 38/68 (55%)
Frame = +2
Query: 431 VEIRRQTTRGQHDCTQTGSANEEGLHHSGRRPSGICGAALLIAARLHEFSRTPSDIVRIV 610
+E + T + D + GRRPSGICGA LL+AAR+H F RT ++V IV
Sbjct: 255 MEFHQDTAKVAEDAVRLVKRMSRDWMVMGRRPSGICGACLLMAARMHNFRRTVREVVYIV 314
Query: 611 KVHESTLR 634
KV T++
Sbjct: 315 KVTNHTIQ 322
Score = 54.0 bits (124), Expect = 3e-06
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +3
Query: 255 CVYMTCRTEGTPH-LLIDVSDAVPLCCYQLGRAYFKLSRALCI---NIPPTDPCLYILRF 422
C+Y CR E +LID++D V L ++LGR + KL+ + I + P P I RF
Sbjct: 192 CLYAACRAEPPCKVMLIDLADLVQLNVFKLGRIFKKLNEVVPIGNDGLIPVYPEDLIWRF 251
Query: 423 ASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
A++++F +V+ A+RL +RM +D + G P
Sbjct: 252 ATKMEFHQDTAKVAEDAVRLVKRMSRDWMVMGRRP 286
>UniRef50_A6RWP2 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 726
Score = 56.4 bits (130), Expect = 6e-07
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +2
Query: 515 GRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSETP 664
GRRPSG+CGA L++AAR++ F RT +++V +VKV +T++K TP
Sbjct: 260 GRRPSGVCGACLILAARMNNFRRTVTEVVYVVKVTTATIQKRLEEFKRTP 309
>UniRef50_A7D4I1 Cluster: Transcription factor TFIIB,
cyclin-related; n=1; Halorubrum lacusprofundi ATCC
49239|Rep: Transcription factor TFIIB, cyclin-related -
Halorubrum lacusprofundi ATCC 49239
Length = 333
Score = 56.0 bits (129), Expect = 8e-07
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFAS 428
+ +Y CR EG P L ++SD + ++GR Y +S+ L + + P DP Y+ RF+S
Sbjct: 194 TAALYAACRKEGIPRSLEEISDVSRVERKEIGRTYRYISQELGLEMRPVDPKKYVPRFSS 253
Query: 429 QLKFEDKQHEVSMTALRLDQRMKKDSITRGEDPPEYVELH-YS*QLDCTNSHAPRPISSV 605
+L+ + EV A + + + + G+ P Y Y+ L C R ++ V
Sbjct: 254 ELELSE---EVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADV 310
>UniRef50_Q7RY40 Cluster: Putative uncharacterized protein
NCU04523.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU04523.1 - Neurospora crassa
Length = 878
Score = 55.2 bits (127), Expect = 1e-06
Identities = 33/89 (37%), Positives = 50/89 (56%)
Frame = +2
Query: 407 VHTSVRIAVEIRRQTTRGQHDCTQTGSANEEGLHHSGRRPSGICGAALLIAARLHEFSRT 586
+H + ++A+ R R QHD + H GRRP+GICGAAL++AAR H + RT
Sbjct: 252 LHDTNKVALSAVRIAKRMQHD----------NITH-GRRPAGICGAALIMAARAHNYRRT 300
Query: 587 PSDIVRIVKVHESTLRKTACSNSETPPFQ 673
++V IVKV +T+++ + P Q
Sbjct: 301 VREVVYIVKVTMATIQERMDEFASVPAAQ 329
Score = 52.0 bits (119), Expect = 1e-05
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Frame = +3
Query: 255 CVYMTCRTEGTPHL-LIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCL---YILRF 422
C+Y CR E + LID++D + + LGR Y + P + I RF
Sbjct: 186 CLYAACRAENNHKIMLIDLADLLHTDVFALGRGYKDFLNRFPEFLTGPRPIVIEDLIYRF 245
Query: 423 ASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
AS+L+F ++V+++A+R+ +RM+ D+IT G P
Sbjct: 246 ASKLEFLHDTNKVALSAVRIAKRMQHDNITHGRRP 280
Score = 34.7 bits (76), Expect = 2.2
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = +1
Query: 1 GASAI-GQFVSADTKGGATGFG----RAFNAGIGQESKEITLRKARIGITALCQQLRLNQ 165
GA+ + G V+ D +GG G G R G E++E +LR+ + + QLR+ Q
Sbjct: 97 GAAVVHGTHVAFD-QGGIRGVGGLAFRRVAGGGASEARERSLREVKALMQQYSYQLRIGQ 155
Query: 166 QCIDIACNFYKMALSRHLTIGR 231
DIA +YK + GR
Sbjct: 156 SISDIAFRYYKACSHANFVQGR 177
>UniRef50_Q0V0E6 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 696
Score = 53.6 bits (123), Expect = 4e-06
Identities = 21/50 (42%), Positives = 35/50 (70%)
Frame = +2
Query: 515 GRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSETP 664
GR+P+G+CGA +++AAR++ F RT ++V +VKV +ST+ +TP
Sbjct: 243 GRQPAGLCGACIILAARMNNFRRTVREVVYVVKVADSTINSRLYEYKQTP 292
>UniRef50_A4RG97 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 701
Score = 52.8 bits (121), Expect = 8e-06
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +2
Query: 515 GRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSETP 664
GRRPSGICGA L++AAR++ F RT ++V I KV TL++ +E P
Sbjct: 278 GRRPSGICGACLIMAARMNNFRRTVREVVFIAKVTMHTLQQRLNEFAEVP 327
Score = 52.4 bits (120), Expect = 1e-05
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = +3
Query: 255 CVYMTCRTEGTPHL-LIDVSDAVPLCCYQLGRAY--FKLSRALCINIPPTDPCLYILRFA 425
C+Y CR E + + L+D++D V + LGR Y F N P I RFA
Sbjct: 188 CLYAACRKETSCKIMLMDLADLVQHDVFHLGRMYKAFISDIGAGGNYNPIFVEDLIYRFA 247
Query: 426 SQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
++L+F DK ++V+ TA+RL QRM +D + G P
Sbjct: 248 ARLEFGDKTNKVASTAVRLVQRMDRDWMVLGRRP 281
>UniRef50_Q58192 Cluster: Transcription initiation factor IIB
(TFIIB) [Contains: Endonuclease Mja Tfb (EC 3.1.-.-)
(Mja Tfb intein) (Mja TFIIB intein)]; n=17;
Euryarchaeota|Rep: Transcription initiation factor IIB
(TFIIB) [Contains: Endonuclease Mja Tfb (EC 3.1.-.-)
(Mja Tfb intein) (Mja TFIIB intein)] - Methanococcus
jannaschii
Length = 673
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/93 (31%), Positives = 49/93 (52%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFAS 428
+ +Y CR P L ++++A + ++GR Y L+R L I + PT+P Y+ RFAS
Sbjct: 532 AAAIYAACRRCRVPRTLDEIAEASRVDRKEIGRTYRFLARELNIKLTPTNPIDYVPRFAS 591
Query: 429 QLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
+L EV A+++ Q+ + +T G P
Sbjct: 592 ELGLPG---EVESKAIQILQQAAEKGLTSGRGP 621
Score = 35.1 bits (77), Expect = 1.7
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +2
Query: 488 ANEEGLHHSGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLR 634
A E+GL SGR P+G+ AA+ IA+ L RT ++ + V E T+R
Sbjct: 610 AAEKGLT-SGRGPTGVAAAAIYIASVLLGCRRTQREVAEVAGVTEVTIR 657
>UniRef50_Q649S4 Cluster: Transcription initiation factor IIB; n=3;
environmental samples|Rep: Transcription initiation
factor IIB - uncultured archaeon GZfos34G5
Length = 306
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/79 (35%), Positives = 41/79 (51%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFAS 428
S +Y+TCR G P L ++++ ++ RAY L R L I + P DP YI RF S
Sbjct: 152 SAMLYITCRQYGVPRTLKEMAEVSRSPLKKIRRAYIFLLRRLEIKLAPADPARYIPRFCS 211
Query: 429 QLKFEDKQHEVSMTALRLD 485
+L + E +M L+ D
Sbjct: 212 KLGLSAEIREKAMVILQDD 230
>UniRef50_Q0WVQ3 Cluster: Putative transcription factor; n=5;
Arabidopsis thaliana|Rep: Putative transcription factor
- Arabidopsis thaliana (Mouse-ear cress)
Length = 604
Score = 50.0 bits (114), Expect = 6e-05
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Frame = +3
Query: 189 FLQNGLIQTFDYRQAGNTYPSCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSR 368
F + + Q F + + C+Y+TCR LLID S + + Y+LG Y +L
Sbjct: 101 FFEMAVEQNFTKGRRTELVQASCLYLTCRELNIALLLIDFSSYLRVSVYELGSVYLQLCE 160
Query: 369 ALCI----NIPP-TDPCLYILRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
L + N DP +++ RF++ L +V TA + MK+D I G P
Sbjct: 161 MLYLVENRNYEKLVDPSIFMDRFSNSLLKGKNNKDVVATARDIIASMKRDWIQTGRKP 218
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSET 661
+GR+PSGICGAAL AA H + +DIV IV + E+TL K +T
Sbjct: 214 TGRKPSGICGAALYTAALSHGIKCSKTDIVNIVHICEATLTKRLIEFGDT 263
>UniRef50_Q4S6G6 Cluster: Chromosome 10 SCAF14728, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 10 SCAF14728, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 514
Score = 49.6 bits (113), Expect = 7e-05
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = +2
Query: 518 RRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSETPPFQ 673
RR G ALL+AAR+H+F RT +IV IVKV E TLRK +TP Q
Sbjct: 67 RRRRGERFQALLVAARMHDFRRTTKEIVGIVKVCEQTLRKRLTEFGDTPTSQ 118
>UniRef50_A2EJ51 Cluster: Transcription factor TFIIB repeat family
protein; n=1; Trichomonas vaginalis G3|Rep:
Transcription factor TFIIB repeat family protein -
Trichomonas vaginalis G3
Length = 409
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +3
Query: 249 SCCVYMTCRTE-GTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFA 425
+ VY+ R + +LL DV++ V Y+L +L+ A+ +P DP LYI RF
Sbjct: 122 AAAVYVAIRVNRSSGYLLDDVAEHVSCGIYELAATALRLAHAVNQPLPTIDPVLYITRFL 181
Query: 426 SQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
+L V TA+ + R+ +D I G P
Sbjct: 182 EELNLGRNLKAVHDTAIHIVHRLDRDWIQTGRKP 215
Score = 40.7 bits (91), Expect = 0.034
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSET 661
+GR+PSGI G A++IA ++H + I I +V ST+ K SET
Sbjct: 211 TGRKPSGIVGTAIMIACQIHHIPISKERIKEIARVCTSTINKRLKEISET 260
>UniRef50_Q9S9Q7 Cluster: F26G16.4 protein; n=1; Arabidopsis
thaliana|Rep: F26G16.4 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 294
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTAC--SNSETPPFQGPEP 685
+GR+PSGICGAAL AA H + +DI IV + E+TL K N+E F E
Sbjct: 54 TGRKPSGICGAALYTAALSHGIKCSKTDITNIVYICEATLTKRLIEFGNTEAASFTADEL 113
Query: 686 SKS 694
S S
Sbjct: 114 SGS 116
>UniRef50_A0E531 Cluster: Chromosome undetermined scaffold_79, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_79,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 439
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = +2
Query: 515 GRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSET 661
GRRPS +CGAALLI+AR H + S + + V+V + T+RK ++T
Sbjct: 182 GRRPSSLCGAALLISARFHGENVPTSQVCKTVQVCDETIRKRLAEFNQT 230
>UniRef50_Q4QA51 Cluster: Transcription factor, putative; n=3;
Leishmania|Rep: Transcription factor, putative -
Leishmania major
Length = 703
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/91 (28%), Positives = 44/91 (48%)
Frame = +3
Query: 255 CVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFASQL 434
C+Y CR E T H++ D S+ + + + A +P DP Y+ RFA Q+
Sbjct: 130 CLYAACRRERTSHVIYDFSEINGEDPHTILSQMKYICHATHTEVPVIDPSCYVQRFAEQM 189
Query: 435 KFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
+ +V + AL++ + M+ D I+ G P
Sbjct: 190 DLGPQTTDVVVCALKVLRAMQDDWISCGRRP 220
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +2
Query: 515 GRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRKTACSNSETP 664
GRRP G+C AALL+A + SRTP + +V++ +T+ K + TP
Sbjct: 217 GRRPMGVCAAALLVACYVFGISRTPEQVCGMVRLTSNTIGKRLTEFAATP 266
>UniRef50_Q9ZU39 Cluster: Putative transcription factor; n=1;
Arabidopsis thaliana|Rep: Putative transcription factor
- Arabidopsis thaliana (Mouse-ear cress)
Length = 257
Score = 46.8 bits (106), Expect = 5e-04
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Frame = +3
Query: 210 QTFDYRQAGNTYPSCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCI--- 380
Q F + S C+Y+ CR L ID S + + Y+LG Y +L L +
Sbjct: 3 QNFTKGRRAELVQSSCLYLACRDMKISLLFIDFSSYLRVSVYELGSVYLQLCEMLYLVQN 62
Query: 381 -NIPP-TDPCLYILRFASQL--KFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
N DP ++I RF + L K +V+ TA + MK+D I G P
Sbjct: 63 KNYEELVDPSIFIPRFTNSLLKGAHAKAKDVANTAKNIISSMKRDWIQTGRKP 115
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRK 637
+GR+PSGICGAA+ +AA H + +DI ++V + E+T+ K
Sbjct: 111 TGRKPSGICGAAIYMAALSHGIMYSRADIAKVVHMCEATITK 152
>UniRef50_Q9HRE6 Cluster: Transcription initiation factor IIB 2;
n=30; Halobacteriaceae|Rep: Transcription initiation
factor IIB 2 - Halobacterium salinarium (Halobacterium
halobium)
Length = 325
Score = 46.4 bits (105), Expect = 7e-04
Identities = 26/93 (27%), Positives = 43/93 (46%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFAS 428
+ +Y + R TP + +V++ + + R Y + R L + + P DP Y+ RFAS
Sbjct: 186 TAALYASARQLSTPRSIDEVANVSRIDEMEFKRTYRYIVRELSLEVAPADPAQYVPRFAS 245
Query: 429 QLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
L D EV + L + D +T G+ P
Sbjct: 246 DLDLPD---EVERRSRELISNAQADGVTSGKSP 275
>UniRef50_Q387K4 Cluster: Transcription factor, putative; n=2;
Trypanosoma|Rep: Transcription factor, putative -
Trypanosoma brucei
Length = 608
Score = 46.0 bits (104), Expect = 9e-04
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +3
Query: 252 CCV-YMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFAS 428
C V Y CR E T H++ D +DA Y + + A +P DP + RFA
Sbjct: 119 CAVLYAMCRRERTSHMVFDFADATGESPYDILSYMHLVCEATRTEVPVIDPSCVVHRFAE 178
Query: 429 QLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
Q+ V + AL++ + M D I G P
Sbjct: 179 QMNLGQMTRSVVVCALKVLRAMHDDWIACGRRP 211
Score = 37.9 bits (84), Expect = 0.24
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 515 GRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRK 637
GRRP G+C AALL+A + R+P ++ V++ T+ +
Sbjct: 208 GRRPLGVCVAALLVACYMFNIPRSPDEVCGFVRLTAGTISR 248
>UniRef50_Q977X4 Cluster: Transcription initiation factor IIB; n=3;
Desulfurococcales|Rep: Transcription initiation factor
IIB - Pyrodictium occultum
Length = 310
Score = 46.0 bits (104), Expect = 9e-04
Identities = 26/93 (27%), Positives = 43/93 (46%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFAS 428
+ VY CR G P + D+++ V ++ R Y + R L + +P DP Y+ R S
Sbjct: 168 AAAVYAACRIRGIPRSIDDIAEVVKGGRKEVARCYRLIVRELKLRMPIVDPVRYVSRIVS 227
Query: 429 QLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
L+ V A + + +K +T G+DP
Sbjct: 228 ALRLSP---AVERRAAEILVQARKMGLTAGKDP 257
>UniRef50_A0RX88 Cluster: Transcription initiation factor TFIIB;
n=9; Crenarchaeota|Rep: Transcription initiation factor
TFIIB - Cenarchaeum symbiosum
Length = 328
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/93 (29%), Positives = 45/93 (48%)
Frame = +3
Query: 249 SCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFAS 428
+ C+Y CR TP L D++ + + + R Y + R L + +P DP + R AS
Sbjct: 192 AACLYAACRNTETPRTLDDIAKGINIRRKDVARCYRLIFRELELKMPVVDPVKGVSRIAS 251
Query: 429 QLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
+ ++ ++T LDQ KK + G+DP
Sbjct: 252 IAELNERTKRRAITI--LDQ-AKKLGMVAGKDP 281
>UniRef50_A7D559 Cluster: Transcription factor TFIIB,
cyclin-related; n=1; Halorubrum lacusprofundi ATCC
49239|Rep: Transcription factor TFIIB, cyclin-related -
Halorubrum lacusprofundi ATCC 49239
Length = 330
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/95 (28%), Positives = 46/95 (48%)
Frame = +3
Query: 243 YPSCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRF 422
+ + CVY+ CRT + ++ + A+ ++R L + I PT P Y+ RF
Sbjct: 194 FAAACVYVACRTADVARTVGEICAEAKATEAEHRAAFDAMNRELGLPIAPTGPAEYLPRF 253
Query: 423 ASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
AS+L D +V A L +R ++ I+ G +P
Sbjct: 254 ASEL---DCDADVERRAGELAKRAVEEGISNGRNP 285
>UniRef50_Q979P7 Cluster: Transcription initiation factor IIB 2;
n=18; Euryarchaeota|Rep: Transcription initiation factor
IIB 2 - Thermoplasma volcanium
Length = 313
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/90 (27%), Positives = 46/90 (51%)
Frame = +3
Query: 258 VYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFASQLK 437
+Y CR P L +++ A + ++G+AY L++ L +N+ PT P YI +F ++L
Sbjct: 175 IYAACRKVNIPRTLDEIAKASEVNKKKIGKAYRHLAKELDLNLRPTTPFSYIAQFCNKLD 234
Query: 438 FEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
+ + +S +R M I+ G+ P
Sbjct: 235 LDKQAIVISEDIVRQAMSM---GISSGKGP 261
>UniRef50_Q74NG0 Cluster: NEQ276; n=1; Nanoarchaeum equitans|Rep:
NEQ276 - Nanoarchaeum equitans
Length = 315
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/97 (27%), Positives = 45/97 (46%)
Frame = +3
Query: 237 NTYPSCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYIL 416
NT + +Y+ R P L ++ A + + +AY + R L I P P ++
Sbjct: 156 NTLLAGTLYLVIREYNIPRTLEELEKATGISKKDIAKAYRLIVRELGIKPKPISPADFVY 215
Query: 417 RFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
R+AS+L EV+ TA+ + + KK +I G P
Sbjct: 216 RYASELNLPP---EVTATAIEIIEEAKKKNIVSGRGP 249
>UniRef50_Q016X1 Cluster: Transcription factor IIIB; n=2;
Ostreococcus|Rep: Transcription factor IIIB -
Ostreococcus tauri
Length = 601
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 255 CVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFASQL 434
CVY CR P + +V++A + + LGR + KL + +PP DP Y+ R + L
Sbjct: 153 CVYSVCRQNNLPVSMREVAEACSVNVFTLGRVFHKLQELHGLKMPPLDPENYVARAVAAL 212
>UniRef50_Q9HNA2 Cluster: Transcription initiation factor IIB 1;
n=4; Halobacteriaceae|Rep: Transcription initiation
factor IIB 1 - Halobacterium salinarium (Halobacterium
halobium)
Length = 287
Score = 41.9 bits (94), Expect = 0.015
Identities = 26/90 (28%), Positives = 41/90 (45%)
Frame = +3
Query: 258 VYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFASQLK 437
VY TCRT G L +++ A +L AY ++R L + P DP Y+ R+A L
Sbjct: 156 VYATCRTNGVTRTLDEIAAAARATRPELTTAYDAMNRDLGLPTGPIDPREYLPRYADALS 215
Query: 438 FEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
+ + A L ++ D + G +P
Sbjct: 216 LPAR---IERQARELVAALETDGLVAGRNP 242
>UniRef50_Q9HR45 Cluster: Transcription initiation factor IIB 4;
n=4; Euryarchaeota|Rep: Transcription initiation factor
IIB 4 - Halobacterium salinarium (Halobacterium
halobium)
Length = 328
Score = 41.5 bits (93), Expect = 0.019
Identities = 26/90 (28%), Positives = 40/90 (44%)
Frame = +3
Query: 258 VYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFASQLK 437
+Y R TP L +V+ + ++ R Y ++R L + + PTDP Y+ RF S L+
Sbjct: 189 LYAAARQANTPRSLDEVASVSRVDRGEIARTYRYVARELSLEVAPTDPASYVPRFCSDLE 248
Query: 438 FEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
+V A L IT G+ P
Sbjct: 249 LSG---DVERRARDLLAAAADAGITSGKSP 275
>UniRef50_UPI00015BAF36 Cluster: Transcription initiation factor IIB
(TFIIB); n=1; Ignicoccus hospitalis KIN4/I|Rep:
Transcription initiation factor IIB (TFIIB) - Ignicoccus
hospitalis KIN4/I
Length = 316
Score = 39.1 bits (87), Expect = 0.10
Identities = 21/90 (23%), Positives = 45/90 (50%)
Frame = +3
Query: 258 VYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFASQLK 437
+Y CR P L +++ + + ++ R Y +++ L + +P D +I R LK
Sbjct: 169 IYAACRIHHQPRTLDEIAKKLEVNRKEVARCYRLITKELKLKVPIADAMDHIPRIGEALK 228
Query: 438 FEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
+ ++ A+++ +++K IT G+DP
Sbjct: 229 L---RGDIIEYAMKIMEKIKGHPITAGKDP 255
>UniRef50_A7DMT5 Cluster: Transcription factor TFIIB,
cyclin-related; n=1; Candidatus Nitrosopumilus maritimus
SCM1|Rep: Transcription factor TFIIB, cyclin-related -
Candidatus Nitrosopumilus maritimus SCM1
Length = 303
Score = 38.7 bits (86), Expect = 0.14
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = +3
Query: 258 VYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFASQLK 437
+Y+TCR TP L DV++A + + R Y L+R L I P ++ R A +
Sbjct: 165 IYITCRMTNTPRTLQDVANAGNVNKKNIQRTYRFLARELDITPEIYHPTEFVTRIAKAVD 224
Query: 438 FEDKQHEVSMTALRLDQR 491
+K ++ L L R
Sbjct: 225 ISEKTERLAFRILDLSAR 242
>UniRef50_Q8U2Z1 Cluster: Transcription initiation factor IIB chain
b homolog; n=2; Pyrococcus|Rep: Transcription initiation
factor IIB chain b homolog - Pyrococcus furiosus
Length = 283
Score = 37.9 bits (84), Expect = 0.24
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +2
Query: 488 ANEEGLHHSGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLR 634
ANEEG+ SG+ P + AAL IA+ L R+ +I R+ V E T+R
Sbjct: 219 ANEEGIT-SGKNPLSLVAAALYIASLLEGERRSQKEIARVTGVSEMTVR 266
Score = 34.3 bits (75), Expect = 2.9
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Frame = +3
Query: 240 TYPSCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPP----TDPCL 407
T + C+Y TCR P L +++ ++ +A+ + R L N+ P P
Sbjct: 136 TTVAACIYATCRLFKVPRTLNEIASYSKTEKKEIMKAFRVIVRNL--NLTPKMLLARPTD 193
Query: 408 YILRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
Y+ +FA +L+ ++ ++ LR R ++ IT G++P
Sbjct: 194 YVDKFADELELSERVRRRTVDILR---RANEEGITSGKNP 230
>UniRef50_Q8TXP2 Cluster: Transcription initiation factor IIB; n=1;
Methanopyrus kandleri|Rep: Transcription initiation
factor IIB - Methanopyrus kandleri
Length = 341
Score = 37.5 bits (83), Expect = 0.32
Identities = 24/101 (23%), Positives = 47/101 (46%)
Frame = +3
Query: 225 RQAGNTYPSCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPC 404
R NT + ++M C+ P + +++ + + R + L R L +P DP
Sbjct: 152 RSIENT-AAAALFMACKKRKHPRTIKEIAKLFGITPKDINRTHRVLLRHLNERMPAPDPK 210
Query: 405 LYILRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
Y+ RFA++L + +V M A + ++ +K +T +P
Sbjct: 211 QYLSRFATELGVSE---DVEMLAREILEKAEKKGLTVSRNP 248
>UniRef50_Q8TX21 Cluster: Transcription initiation factor IIB; n=1;
Methanopyrus kandleri|Rep: Transcription initiation
factor IIB - Methanopyrus kandleri
Length = 307
Score = 37.5 bits (83), Expect = 0.32
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +3
Query: 258 VYMTCRTEGTPHLLIDVSDAVPLCCY-QLGRAYFKLSRALCINIPPTDPCLYILRFASQL 434
V+ C+ P ++++A+ + ++ RAY L R L + PT+P ++ RFAS+L
Sbjct: 168 VFAACKEARVPRTAREIAEALGVSDENEILRAYRVLQRRLNLKQKPTEPSDHLPRFASKL 227
Query: 435 KFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
+ V A + ++ K+ IT G+ P
Sbjct: 228 GVSE---NVQAKAQEIIEKAKEKGITVGKGP 255
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +2
Query: 488 ANEEGLHHSGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLR 634
A E+G+ G+ P+G+ AAL IA+ L RT +I + +V E T+R
Sbjct: 244 AKEKGIT-VGKGPAGVAAAALYIASILEGERRTQKEIAEVARVTEVTIR 291
>UniRef50_Q9Y942 Cluster: Transcription initiation factor IIB; n=1;
Aeropyrum pernix|Rep: Transcription initiation factor
IIB - Aeropyrum pernix
Length = 322
Score = 36.7 bits (81), Expect = 0.55
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 512 SGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLR 634
+G+ P G+ GAA+ +AA H +T +I +V V E T+R
Sbjct: 257 AGKDPGGLAGAAVYLAALKHGIRKTQKEIAHVVGVTEVTIR 297
>UniRef50_A7DP14 Cluster: Transcription factor TFIIB,
cyclin-related; n=1; Candidatus Nitrosopumilus maritimus
SCM1|Rep: Transcription factor TFIIB, cyclin-related -
Candidatus Nitrosopumilus maritimus SCM1
Length = 309
Score = 36.3 bits (80), Expect = 0.73
Identities = 23/90 (25%), Positives = 46/90 (51%)
Frame = +3
Query: 258 VYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFASQLK 437
VY+TC+ G P D + + +L +AY +L + L + I P++ ++ + A+ L
Sbjct: 165 VYVTCKQLGIPRSADDTTRVSNISRRRLSKAYKRLVKNLDLKIDPSETD-FVTQVANSLS 223
Query: 438 FEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
+K + A+++ +KK+ I G+ P
Sbjct: 224 VSEKTKRL---AIKIINDVKKEKIHVGKRP 250
>UniRef50_Q00403 Cluster: Transcription initiation factor IIB; n=40;
Eumetazoa|Rep: Transcription initiation factor IIB -
Homo sapiens (Human)
Length = 316
Score = 36.3 bits (80), Expect = 0.73
Identities = 22/100 (22%), Positives = 44/100 (44%)
Frame = +3
Query: 228 QAGNTYPSCCVYMTCRTEGTPHLLIDVSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCL 407
+A + S C+Y+ CR EG P ++ + ++GR + + +AL ++
Sbjct: 154 RANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGD 213
Query: 408 YILRFASQLKFEDKQHEVSMTALRLDQRMKKDSITRGEDP 527
++ RF S L +V M A + ++ + + G P
Sbjct: 214 FMSRFCSNLCL---PKQVQMAATHIARKAVELDLVPGRSP 250
>UniRef50_Q6ZW61 Cluster: Bardet-Biedl syndrome 12 protein; n=15;
Mammalia|Rep: Bardet-Biedl syndrome 12 protein - Homo
sapiens (Human)
Length = 710
Score = 35.1 bits (77), Expect = 1.7
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 354 NMLDQVDSSTMVQHHLHQLADEGSPLSYRSCKHSSL 247
N + ++ST +QHHL D GSP SY ++S L
Sbjct: 608 NYSSEFEASTYIQHHLQNATDSGSPSSYILNEYSKL 643
>UniRef50_A6RNC6 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 716
Score = 34.7 bits (76), Expect = 2.2
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +1
Query: 547 ITHSSSTARILTHPVRYRPYSQSSRVNTPQNGMFEFGD----TPIPG 675
I H+ +T ++TH V++ PYS V +P+ + +FG T +PG
Sbjct: 492 IRHTGATIVLVTHAVKWLPYSDQILVLSPEGRLLQFGTYQFLTSVPG 538
>UniRef50_Q0UK00 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 360
Score = 33.5 bits (73), Expect = 5.1
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 467 DCTQTGSANEEGLHHSGRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLR 634
+C +T E G+ +GR P I GA L + + L +TP +I V+V + T+R
Sbjct: 277 ECART--VTEHGIA-AGRSPLSIAGAVLYLVSHLMGTPKTPKEIGLAVEVSDGTIR 329
>UniRef50_A1RX53 Cluster: Zinc finger, TFIIB-type domain protein;
n=1; Thermofilum pendens Hrk 5|Rep: Zinc finger,
TFIIB-type domain protein - Thermofilum pendens (strain
Hrk 5)
Length = 279
Score = 33.1 bits (72), Expect = 6.8
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 515 GRRPSGICGAALLIAARLHEFSRTPSDIVRIVKVHESTLRK 637
G++P GI AA+ I A L + +T S I +I V TLR+
Sbjct: 224 GKKPRGIAAAAVYIIANLLGYRKTQSLIAKIAGVSTLTLRR 264
>UniRef50_Q5LBL8 Cluster: Putative glycosyltransferase protein; n=1;
Bacteroides fragilis NCTC 9343|Rep: Putative
glycosyltransferase protein - Bacteroides fragilis
(strain ATCC 25285 / NCTC 9343)
Length = 406
Score = 32.7 bits (71), Expect = 9.0
Identities = 19/97 (19%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +3
Query: 261 YMTCRTEGTPHLLID-VSDAVPLCCYQLGRAYFKLSRALCINIPPTDPCLYILRFASQLK 437
+ T EGTPH++++ +++ +P+ C+ + ++ + I IP + P I FA ++
Sbjct: 304 FFTSIAEGTPHVVLEAINNNLPVICFDICGHGDSINEQVGIKIPLSTPQQSINDFAEKIT 363
Query: 438 FEDKQHEVSMTALRLDQRMKKDSITRGEDPPEYVELH 548
+ +V + + + R++++ ++ + V L+
Sbjct: 364 YLFNHRDV-LKQMSENCRVRQEELSWDNKAKQMVSLY 399
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,321,146
Number of Sequences: 1657284
Number of extensions: 15701376
Number of successful extensions: 41663
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 39786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41628
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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