Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31054
         (701 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    25   1.7  
AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse t...    23   7.0  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   9.3  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   9.3  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   9.3  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 536 CGAALLIAARLHEFSRTPSDIVRIVKV 616
           CG   +IA +L EF    +D + +VKV
Sbjct: 32  CGPCKVIAPKLEEFQNKYADKIVVVKV 58


>AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 131

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 337 NLVEHISNCHGLCAS 381
           NLVE +S+CH   AS
Sbjct: 47  NLVEFVSHCHAAFAS 61


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 324 MVQHHLHQLADE 289
           +VQ HLH+LA+E
Sbjct: 842 VVQQHLHELAEE 853


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -1

Query: 530 RRVFSPSDGVLLHSLIQSECSHA-DLVLFVFEFQLRCEPKYVQARISRRYV 381
           RR    SD +LL      E S A + V F+ E  LR E  Y+Q R   +YV
Sbjct: 428 RRESESSDSILL----SPEASKATEAVEFIAE-HLRNEDLYIQTREDWKYV 473


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 216  FDYRQAGNTYPSCCV 260
            F+Y   GN +PSC V
Sbjct: 1648 FNYAYRGNYHPSCAV 1662


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 800,120
Number of Sequences: 2352
Number of extensions: 16960
Number of successful extensions: 41
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)