Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31053
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.47 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   3.3  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   5.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 357 GIQQMLILRC*RQRTSFFFFCEDFVELVHL 268
           GI   L+ +C   R  ++F+C      VHL
Sbjct: 41  GILDSLVFKCYNLRRIYYFYCVSITFNVHL 70


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 322 PSTPEDQHLLDA 357
           P +PED+ LLDA
Sbjct: 234 PKSPEDEELLDA 245


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
 Frame = +3

Query: 141 PSSRD*NKRRCGKWNLILDPKACPPM-DCDAGKDG-IPMREPC 263
           P SRD     C K   + DP  C     C A   G +P+ + C
Sbjct: 412 PPSRDLTTTLCTKAGYVRDPDDCSIFYYCLAYNGGFVPLEQRC 454


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,511
Number of Sequences: 336
Number of extensions: 4031
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)