Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31053
         (728 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006733-6|AAF60489.2|  581|Caenorhabditis elegans Hypothetical ...    53   2e-07
U70848-1|AAB09107.2|  434|Caenorhabditis elegans Hypothetical pr...    46   3e-05
U51925-1|AAA97909.1|  396|Caenorhabditis elegans trehalase I pro...    31   0.64 
AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase pro...    31   0.64 
AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase pro...    31   0.64 
Z81085-2|CAB03114.2|  618|Caenorhabditis elegans Hypothetical pr...    29   4.5  

>AC006733-6|AAF60489.2|  581|Caenorhabditis elegans Hypothetical
           protein Y32H12A.5 protein.
          Length = 581

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 22/33 (66%), Positives = 25/33 (75%)
 Frame = +3

Query: 489 FQTFATLLQDNDYLHKGHRPPLPSFSACFASNF 587
           F+T    LQDN+YL  GHRPPLPSFS+CF S F
Sbjct: 273 FETLPEWLQDNEYLRTGHRPPLPSFSSCFKSIF 305



 Score = 33.5 bits (73), Expect = 0.16
 Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
 Frame = +1

Query: 343 HLLDAEMAEVLKAGVLSDEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFRHLPRCYKTT 522
           HL  ++  + L+  +  +E+    +     E     +++ WEA W   +F  LP   +  
Sbjct: 227 HLDHSDDDDELEVEINEEEV---IIPSETGEGPRAVIKRFWEARWKATNFETLPEWLQDN 283

Query: 523 IIYTKDIDRLYLRS-AHVLHQIFRIHTGTGNI 615
             Y +   R  L S +     IF +HT TGNI
Sbjct: 284 -EYLRTGHRPPLPSFSSCFKSIFALHTETGNI 314


>U70848-1|AAB09107.2|  434|Caenorhabditis elegans Hypothetical
           protein C43G2.1 protein.
          Length = 434

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +3

Query: 510 LQDNDYLHKGHRPPLPSFSACFAS 581
           LQDN++L  GHRPPLPSFS CF S
Sbjct: 170 LQDNEFLRHGHRPPLPSFSECFKS 193



 Score = 31.1 bits (67), Expect = 0.84
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +1

Query: 394 DEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFRHLPRCYKTTIIYTKDIDRLYLRS-AH 570
           DE+++  +  + +EQ    V K +EA W V  + HLP   +    + +   R  L S + 
Sbjct: 133 DELEVD-VKEDRSEQTG-IVTKTYEARWKVLKYEHLPEWLQDN-EFLRHGHRPPLPSFSE 189

Query: 571 VLHQIFRIHTGTGNI 615
               I+ +HT TGNI
Sbjct: 190 CFKSIWSLHTETGNI 204


>U51925-1|AAA97909.1|  396|Caenorhabditis elegans trehalase I
           protein.
          Length = 396

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 197 IQYQIPLPTSSLVSITRRWEIGNHWPP 117
           ++Y   LPTS  +S T++W+  N WPP
Sbjct: 256 LKYTKGLPTSLAMSSTQQWDKENAWPP 282


>AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase
           protein.
          Length = 567

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 197 IQYQIPLPTSSLVSITRRWEIGNHWPP 117
           ++Y   LPTS  +S T++W+  N WPP
Sbjct: 427 LKYTKGLPTSLAMSSTQQWDKENAWPP 453


>AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase
           protein 1 protein.
          Length = 567

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 197 IQYQIPLPTSSLVSITRRWEIGNHWPP 117
           ++Y   LPTS  +S T++W+  N WPP
Sbjct: 427 LKYTKGLPTSLAMSSTQQWDKENAWPP 453


>Z81085-2|CAB03114.2|  618|Caenorhabditis elegans Hypothetical
           protein F46F3.2 protein.
          Length = 618

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 200 GIQYQIPLPTSSLVSITRRWEIGNHWPP 117
           G+ YQ PLP+S+++   R+ E     PP
Sbjct: 238 GLDYQRPLPSSTILPFLRKMEYDARQPP 265


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,005,159
Number of Sequences: 27780
Number of extensions: 397721
Number of successful extensions: 1174
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)