Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31053
         (728 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   3.9  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.2  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   6.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.0  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -2

Query: 463 ILCERIPRPVRRRYGP 416
           ILC   P  VRRRY P
Sbjct: 404 ILCACCPGRVRRRYQP 419


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 439 PVRRRYGPVLPNQS 398
           P+   YGPV+P QS
Sbjct: 648 PLNVPYGPVIPEQS 661


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 716 LCLGNLKFPIDGRDQ 672
           +C G LK P DGR +
Sbjct: 647 VCRGKLKLPPDGRTE 661


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 191 IGSQSVSSDGLRRR 232
           +G Q+ + DGLRRR
Sbjct: 425 VGEQARAQDGLRRR 438


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 655  GRESTFWSRPSIGN 696
            G  S+ WSRPS  N
Sbjct: 1900 GLRSSLWSRPSTQN 1913


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 655  GRESTFWSRPSIGN 696
            G  S+ WSRPS  N
Sbjct: 1896 GLRSSLWSRPSTQN 1909


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,455
Number of Sequences: 438
Number of extensions: 5274
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)