Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31052
(587 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom... 29 0.67
SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2 |Sc... 29 0.67
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 28 1.2
SPAC17A2.14 ||SPAC17G6.01|CorA family magnesium ion transporter|... 27 1.5
SPAC4G9.05 |mpf1||meiotic PUF family protein 1|Schizosaccharomyc... 27 2.0
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 27 2.0
SPBC1734.10c |||mRNA processing protein |Schizosaccharomyces pom... 27 2.7
SPAC8E11.05c |||conserved fungal protein|Schizosaccharomyces pom... 26 3.5
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 26 3.5
SPAC8F11.10c |pvg1|SPACUNK4.18|pyruvyltransferase |Schizosacchar... 26 4.7
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 26 4.7
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 26 4.7
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 6.2
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 25 8.2
SPAC3H5.10 |rpl3202|rpl32-2, rpl32|60S ribosomal protein L32|Sch... 25 8.2
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 25 8.2
>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 28.7 bits (61), Expect = 0.67
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +2
Query: 470 KEGPQESVYACCGRSLMGSTF--WLLALYLILL 562
K P ++Y CCGR M S + +L++L+ ++L
Sbjct: 64 KNLPGNNIYLCCGRLQMSSQYKAFLISLFALIL 96
>SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 28.7 bits (61), Expect = 0.67
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 173 TENSTNDDVKKISKRDVKEDKPQEQP 250
TEN TNDD K+++ DV E P
Sbjct: 136 TENQTNDDAKEVNGSDVDEKSKHLYP 161
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 27.9 bits (59), Expect = 1.2
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 158 TQMTNTENSTNDDVKK 205
+Q+TN EN+ NDD+KK
Sbjct: 680 SQITNNENNGNDDIKK 695
>SPAC17A2.14 ||SPAC17G6.01|CorA family magnesium ion
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 617
Score = 27.5 bits (58), Expect = 1.5
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2
Query: 59 RDDLYLPIDPRNKGSEIVALTEEQLDNITNIEITQMTNTENSTNDDVKKISKRDVKEDKP 238
RD+LYLPI P N ++ +E + + N E + +DV K +R+ K +P
Sbjct: 191 RDELYLPISPNNAQEPKFSVLDEWTKKM-------VANFEEYSVEDVDKRRERNRKLSEP 243
>SPAC4G9.05 |mpf1||meiotic PUF family protein 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 155 ITQMTNTENSTNDDVKKISKRDVKEDKPQEQPKELNRVKDM 277
ITQ+ + ++ KKI ++ K ++Q +EL R+ +M
Sbjct: 31 ITQILYLQTLVSEQQKKIESSTLEVQKKKDQIRELERIYEM 71
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 27.1 bits (57), Expect = 2.0
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 101 SEIVALTEEQLDNITNIE--ITQMTNTENSTNDDVKKISKRDVKEDKPQEQPKELNRVKD 274
S + + + L + NI+ I Q ++T+N + ++ +D+ E KELN +
Sbjct: 237 SSVNSFANDNLAHNKNIDPQIFQHSDTDNVVENSLQTEDVYSQNQDESSEVVKELNGIDP 296
Query: 275 -MQTVH*CNNAGQIRCAAV 328
++ ++ N G I AAV
Sbjct: 297 FVEAMNLIKNGGSISKAAV 315
>SPBC1734.10c |||mRNA processing protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 332
Score = 26.6 bits (56), Expect = 2.7
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -3
Query: 438 KFTFPINVARC*DPPVNPL*MSNSTLATVTCLRSKWSTAAHLIWPAL 298
KF P+ ++R P+NP+ S++ ++C +S + W A+
Sbjct: 31 KFPLPLTLSR--STPINPIIRSDTIQLVISCPPVTYSDEIQVPWKAI 75
>SPAC8E11.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 338
Score = 26.2 bits (55), Expect = 3.5
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +2
Query: 92 NKGSEIVALTEEQLDNITNIEITQMTNTENSTNDDVKKISKRDVKEDKPQEQPKELNRVK 271
++ S ++ L EE+ + N E+ + +S +DV D K D + +LN V+
Sbjct: 8 SRESPVLGLEEEKKSDGGNSEVNIDPSASSSLKEDVDGEEGADTKIDPHLLEEDDLNPVE 67
Query: 272 D 274
D
Sbjct: 68 D 68
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 26.2 bits (55), Expect = 3.5
Identities = 18/72 (25%), Positives = 38/72 (52%)
Frame = +2
Query: 20 NYDQCPSQEIIGRRDDLYLPIDPRNKGSEIVALTEEQLDNITNIEITQMTNTENSTNDDV 199
++ CP +++I Y+ +D +N+GS+ +++ + I T + ++DD+
Sbjct: 339 SFKHCPVEKLIE-----YMAVDKKNQGSK------KRIVILKAIGETYEKHATVVSDDDI 387
Query: 200 KKISKRDVKEDK 235
+ I RDVK D+
Sbjct: 388 RFILSRDVKVDE 399
>SPAC8F11.10c |pvg1|SPACUNK4.18|pyruvyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 25.8 bits (54), Expect = 4.7
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 83 DPRNKGSEIVALTEEQLDNITNIEITQMTNTENSTNDDVKKISKRDVKEDK 235
D NKG + + E++L + NIE+ +T E + K D+ D+
Sbjct: 100 DHPNKGDSAIYVAEKKLLDALNIEVVYITAQEADYSASELKSIISDIPRDE 150
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 25.8 bits (54), Expect = 4.7
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 41 QEIIGRRDDLYLPIDPRNKGSEIVALTEEQLDNITNIEITQMTNTEN 181
Q +IG ++ IDPR +G+++VA E+ T + + TEN
Sbjct: 547 QTLIGLSNNSIFRIDPRVEGNKLVA--EQFKQYATKNDFSSAATTEN 591
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 25.8 bits (54), Expect = 4.7
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +2
Query: 509 RSLMGSTFWLLALYLILLGFRASC 580
RSL+ S+FW+L ++ ++ R +C
Sbjct: 539 RSLIYSSFWILNPFVAIISTRGNC 562
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.4 bits (53), Expect = 6.2
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Frame = +2
Query: 74 LPIDPRNKGSEIVALTEEQLDNITNIEITQM-----TNTENSTNDDVKKISKRD-----V 223
L +DP+ G ++E++ D + E +M T+ S +D + S++D V
Sbjct: 346 LNLDPQKPGKSQGEISEQEEDEYDDAESDEMHSPYSTHEPESEPEDQDEPSEKDDENKDV 405
Query: 224 KEDKPQEQPKE 256
+E++ QEQ +E
Sbjct: 406 EEEQEQEQEEE 416
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.0 bits (52), Expect = 8.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 95 KGSEIVALTEEQLDNITNIEITQMTNTENSTN 190
+G IV T++ + +TNIE M+N N
Sbjct: 669 RGDYIVQRTQQSANPLTNIEPQDMSNLSTDIN 700
>SPAC3H5.10 |rpl3202|rpl32-2, rpl32|60S ribosomal protein
L32|Schizosaccharomyces pombe|chr 1|||Manual
Length = 127
Score = 25.0 bits (52), Expect = 8.2
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 148 YRNHSDDKH*KLYK**REENK*KRCQRR*ASGTT*RIEPRQGYANRPLVQQCRPN 312
++ H D+ ++ + R+ C RR GT P+ GY N + C PN
Sbjct: 14 FKRHQSDRFKRVGESWRKPRGIDSCVRRRFRGTI--SMPKIGYGNNKKTRYCMPN 66
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 25.0 bits (52), Expect = 8.2
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = +2
Query: 77 PIDPRNKGSEIVALTEEQLDNITNIEITQMTNTENSTNDDVKKISKRDVKEDKPQEQPKE 256
PI + EI + ++L N N+ ++ N + N+D I KRD P +
Sbjct: 198 PISATSVSIEI-PIKPKELSN--NLPFPRLNNNNTNNNNDNNAIEKRDSASPTPSSVSSQ 254
Query: 257 LN 262
++
Sbjct: 255 IS 256
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,406,415
Number of Sequences: 5004
Number of extensions: 48955
Number of successful extensions: 164
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 254167452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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