Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31052
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 35 0.037
U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical pr... 32 0.26
U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical pr... 32 0.26
U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical pr... 32 0.26
AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobuli... 32 0.26
Z72505-4|CAA96611.1| 347|Caenorhabditis elegans Hypothetical pr... 31 0.46
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p... 29 2.4
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr... 29 2.4
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 29 2.4
Z83105-2|CAB05483.1| 434|Caenorhabditis elegans Hypothetical pr... 29 3.2
U41014-1|AAK32947.3| 641|Caenorhabditis elegans Hypothetical pr... 29 3.2
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 28 4.3
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 28 4.3
Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z79694-2|CAB01960.1| 173|Caenorhabditis elegans Hypothetical pr... 28 5.7
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical pr... 27 7.5
U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 27 7.5
AF026207-1|AAB71266.1| 522|Caenorhabditis elegans Hypothetical ... 27 7.5
AC006699-1|ABA00171.1| 160|Caenorhabditis elegans Nuclear hormo... 27 7.5
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 9.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 9.9
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 27 9.9
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 35.1 bits (77), Expect = 0.037
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 89 RNKGSEIVALTEEQLDNITNIEITQMTNTENSTNDDVKKISKRDVKEDKPQEQPKELNRV 268
R G + LT E N IE ++ + +NS +V+K KR K+D E+ E+ ++
Sbjct: 322 REGGGQSPTLTPE---NANTIEKSKKVSLDNSKRREVQKQRKRPQKQDSSSEEDDEVEKI 378
Query: 269 KD 274
+D
Sbjct: 379 RD 380
>U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical
protein F02G3.1c protein.
Length = 955
Score = 32.3 bits (70), Expect = 0.26
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 80 IDPRNKGSEIVALTEEQLDNITNIEITQMTNTENSTNDDVKKISKRDVKEDKPQEQPKEL 259
I P + SE V T E + + + ++ + EN ND+ S++D E QE+ K+
Sbjct: 388 IRPESNESEEVTTTSENSEETSTQDEVELKSAEN-VNDEEDHTSQQDDGEQDEQEESKKW 446
Query: 260 NRVKD 274
R D
Sbjct: 447 KRFAD 451
>U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical
protein F02G3.1b protein.
Length = 913
Score = 32.3 bits (70), Expect = 0.26
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 80 IDPRNKGSEIVALTEEQLDNITNIEITQMTNTENSTNDDVKKISKRDVKEDKPQEQPKEL 259
I P + SE V T E + + + ++ + EN ND+ S++D E QE+ K+
Sbjct: 361 IRPESNESEEVTTTSENSEETSTQDEVELKSAEN-VNDEEDHTSQQDDGEQDEQEESKKW 419
Query: 260 NRVKD 274
R D
Sbjct: 420 KRFAD 424
>U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical
protein F02G3.1a protein.
Length = 928
Score = 32.3 bits (70), Expect = 0.26
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 80 IDPRNKGSEIVALTEEQLDNITNIEITQMTNTENSTNDDVKKISKRDVKEDKPQEQPKEL 259
I P + SE V T E + + + ++ + EN ND+ S++D E QE+ K+
Sbjct: 361 IRPESNESEEVTTTSENSEETSTQDEVELKSAEN-VNDEEDHTSQQDDGEQDEQEESKKW 419
Query: 260 NRVKD 274
R D
Sbjct: 420 KRFAD 424
>AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobulin
domain-containingprotein F02G3.1 protein.
Length = 928
Score = 32.3 bits (70), Expect = 0.26
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 80 IDPRNKGSEIVALTEEQLDNITNIEITQMTNTENSTNDDVKKISKRDVKEDKPQEQPKEL 259
I P + SE V T E + + + ++ + EN ND+ S++D E QE+ K+
Sbjct: 361 IRPESNESEEVTTTSENSEETSTQDEVELKSAEN-VNDEEDHTSQQDDGEQDEQEESKKW 419
Query: 260 NRVKD 274
R D
Sbjct: 420 KRFAD 424
>Z72505-4|CAA96611.1| 347|Caenorhabditis elegans Hypothetical
protein C50C10.6 protein.
Length = 347
Score = 31.5 bits (68), Expect = 0.46
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 362 SVELDIHKGLTGGSQHLATFIGKVNFG 442
+VEL+ HK GS+HL +IG ++ G
Sbjct: 116 TVELEFHKKYISGSKHLLLYIGPISIG 142
>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 62 DDLYLPIDPRNKGSEIVALTEEQLDNITNIEITQMTNTENSTNDDV 199
+D Y + PR SEI ++ + N ++ M +ST+DDV
Sbjct: 910 NDTYPTLAPRTLESEIGGISARRPSNAASLSSPAMATRSHSTDDDV 955
>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical protein
ZK1251.9 protein.
Length = 1701
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 62 DDLYLPIDPRNKGSEIVALTEEQLDNITNIEITQMTNTENSTNDDV 199
+D Y + PR SEI ++ + N ++ M +ST+DDV
Sbjct: 910 NDTYPTLAPRTLESEIGGISARRPSNAASLSSPAMATRSHSTDDDV 955
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +2
Query: 173 TENSTNDDVKKISKRDVKEDKPQEQPKELNRVKDMQ 280
+E+ ++D+ K K+ KED P+E+ KE + K+ +
Sbjct: 1039 SESDSDDNSLKKEKKHRKEDHPKEKEKEKKKEKEQE 1074
>Z83105-2|CAB05483.1| 434|Caenorhabditis elegans Hypothetical
protein F14H3.2 protein.
Length = 434
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 11 VCVNYDQCPS-QEIIGRRDDLYLPIDPRNKGSEIVALTEEQLDNITNIEITQMTNTENST 187
V + +CP +E+IG DD Y+P P + S+ EE + +++ +T+++
Sbjct: 334 VSSEHTECPELEEVIG--DD-YVPWYPDDCKSKEEKNQEELKKYLESVDFQAVTSSDQGE 390
Query: 188 NDDVKKISK 214
ND+V + K
Sbjct: 391 NDEVSTMMK 399
>U41014-1|AAK32947.3| 641|Caenorhabditis elegans Hypothetical
protein C06G1.4 protein.
Length = 641
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 128 QLDNITNIEITQMTNTENSTNDDVKKISKRDVKEDKPQEQPKELN 262
Q N+ ++I + + EN ++ DVKE PQ Q K +N
Sbjct: 539 QYVNMLLVKIPALDSVENELKQIIESSLPEDVKEVDPQNQQKYMN 583
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 95 KGSEIVALTE--EQLDNITNIEITQMTNTENSTNDDVKKISKRDVKEDKPQEQPKELNRV 268
K E+ TE E++DN + +T + + D + + DV+ KP EQP++ + V
Sbjct: 365 KSPEVQKATEPTEKIDNFQSTPVTAVPRGVPNLVDTSSEDEEEDVEIIKPIEQPEKASEV 424
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/86 (23%), Positives = 36/86 (41%)
Frame = +2
Query: 95 KGSEIVALTEEQLDNITNIEITQMTNTENSTNDDVKKISKRDVKEDKPQEQPKELNRVKD 274
K ++ A T E+L + EI+ + T++ K++ + K+ KP E P K
Sbjct: 540 KADDVKAPTPEELVEVR--EISPVAENLEPTSES-KRVKSKKQKKQKPSENPIAKPEEKQ 596
Query: 275 MQTVH*CNNAGQIRCAAVDHLDLKQV 352
C A + D L L+++
Sbjct: 597 SNACPKCFRASEYNIKLRDDLRLEKI 622
>Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical
protein F25H5.7 protein.
Length = 490
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 191 DDVKKISKRDVKEDKPQEQPKELNRVKDM 277
D KK+SK ++E+K +EQ K++N+ K M
Sbjct: 116 DPSKKLSKEKLREEK-KEQSKKVNKEKKM 143
>Z79694-2|CAB01960.1| 173|Caenorhabditis elegans Hypothetical
protein C15A11.2 protein.
Length = 173
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 176 ENSTNDDVKKISKRDVKEDKPQEQPKELNRVKD 274
++ D VK I+K +KE +P+EQPKE + K+
Sbjct: 103 KDQAKDVVKDIAKPPLKE-QPKEQPKEQPKKKE 134
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 101 SEIVALTEEQLDNITNIEITQMTNTENSTNDD-VKKISKRDVKEDKPQEQPKE 256
SE TEE+ N++ E+T ++TE S ++ K ++ +E+K E +E
Sbjct: 148 SEENKTTEEESGNVSAEEVTTTSSTEVSVEEEQTVKSTEASTEEEKSTEASEE 200
>Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical
protein F38H4.3 protein.
Length = 471
Score = 27.5 bits (58), Expect = 7.5
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +2
Query: 176 ENSTNDDVKKISKRDVKEDKPQEQPKELNRVKDMQTVH*CNNAGQIRC-AAVDHLDLKQV 352
+ S +DDV+K KP E E + D+ + + R A +D +LK+
Sbjct: 111 KRSVDDDVEKPQTSQKPPQKPSEPDAESINMNDILMENVLKTTEEDRTEAEIDENELKKA 170
Query: 353 TVASVELDIHKGLTGGSQHL 412
S E KG +G S+ +
Sbjct: 171 LKKSDEAPALKGRSGISKEM 190
>U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical
protein ZC395.8 protein.
Length = 687
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 125 EQLDNITNIEITQMTNTENSTNDDVKKISKRDVKEDKPQEQPKELN 262
++L I I+ + + ND +I++ VKE+ +EQPKE N
Sbjct: 485 QKLSQIVRIKPEIIDVEDVLMNDVTMEINEIPVKEETEEEQPKEEN 530
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 92 NKGSEIVALTEEQLDNITNIEITQMTNTENSTN-DDVKKISKRDVKEDKPQEQPKELNRV 268
+K SE E++ D+ + ++N + DD KK K+D KE+K +E+ +E
Sbjct: 128 DKKSEDKKEDEKEKDDDKKEDKKDDKKSDNKDDKDDEKKEEKKDDKEEKKEEKKEEKKEE 187
Query: 269 K 271
K
Sbjct: 188 K 188
>AF026207-1|AAB71266.1| 522|Caenorhabditis elegans Hypothetical
protein H42K12.3 protein.
Length = 522
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +2
Query: 92 NKGSEIVALTEEQLDNITNIEITQMTNTENSTNDDVKKISKRDVKEDKPQEQPKELNRVK 271
NK +E TEE + + + ++ T + V+K+ + +E KP+ +P+E K
Sbjct: 206 NKKNEPTVETEEVQEEVRPVAHVLISETTPKPDSPVEKVVEEVGEEVKPEMKPEEQFDEK 265
Query: 272 DMQT 283
+T
Sbjct: 266 QEET 269
>AC006699-1|ABA00171.1| 160|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 41 protein.
Length = 160
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 411 RC*DPPVNPL*MSNSTLATVTCLRSKWSTAAHLIW 307
+C D P PL + NST +T ++A+H W
Sbjct: 6 KCSDHPHRPLILENSTSSTGLIFAESQASASHQTW 40
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.1 bits (57), Expect = 9.9
Identities = 26/110 (23%), Positives = 48/110 (43%)
Frame = +2
Query: 89 RNKGSEIVALTEEQLDNITNIEITQMTNTENSTNDDVKKISKRDVKEDKPQEQPKELNRV 268
+ EIVA E+Q+D E T E T VKK + E+ QE ++L +
Sbjct: 15048 QKSAEEIVA--EKQVDQSQASESTTEAVEEKKTKKVVKKKVAENKGEETLQEVKEKLKKG 15105
Query: 269 KDMQTVH*CNNAGQIRCAAVDHLDLKQVTVASVELDIHKGLTGGSQHLAT 418
K ++ V + G ++ A+ D+ + + E ++ K ++ +T
Sbjct: 15106 KAVEKVQDESRRGSLQ-ASSDNESVTTTSEKRSEAELEKNSEKSAEKKST 15154
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.1 bits (57), Expect = 9.9
Identities = 26/110 (23%), Positives = 48/110 (43%)
Frame = +2
Query: 89 RNKGSEIVALTEEQLDNITNIEITQMTNTENSTNDDVKKISKRDVKEDKPQEQPKELNRV 268
+ EIVA E+Q+D E T E T VKK + E+ QE ++L +
Sbjct: 15048 QKSAEEIVA--EKQVDQSQASESTTEAVEEKKTKKVVKKKVAENKGEETLQEVKEKLKKG 15105
Query: 269 KDMQTVH*CNNAGQIRCAAVDHLDLKQVTVASVELDIHKGLTGGSQHLAT 418
K ++ V + G ++ A+ D+ + + E ++ K ++ +T
Sbjct: 15106 KAVEKVQDESRRGSLQ-ASSDNESVTTTSEKRSEAELEKNSEKSAEKKST 15154
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 77 PIDPRNKGSEIVALTEEQLDNITNIEITQMTNTENSTNDDVKKISKRDVKEDKPQEQPKE 256
P+D + + + + ++N +E T E DD + S + K+D +E+ +
Sbjct: 798 PMDDSSPVDQSTPVKADDIENFAGVEETFGEEEEVQDEDDDEASSAKSSKDDIKEEEDDD 857
Query: 257 LNRV-KDM 277
+ + KDM
Sbjct: 858 TSTITKDM 865
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,491,263
Number of Sequences: 27780
Number of extensions: 286238
Number of successful extensions: 1019
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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