Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31051
(629 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 139 2e-33
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 137 8e-33
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 136 1e-32
09_06_0319 - 22293869-22293906,22294539-22295808 31 1.00
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 31 1.00
11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931 29 2.3
09_06_0318 - 22274966-22275144,22275846-22276812,22276890-22277093 29 3.0
01_01_0762 + 5889925-5890136,5891110-5891273,5891755-5891878,589... 29 3.0
05_01_0508 + 4242705-4242886,4243129-4243234,4246179-4246517 29 4.0
09_02_0483 + 9796395-9796409,9796754-9797251 28 5.3
09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116... 28 5.3
08_02_0567 + 18769742-18769790,18769928-18771351 28 5.3
04_01_0289 + 3830052-3831134,3831141-3831230,3831494-3831525,383... 28 5.3
02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142 28 5.3
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 28 7.0
12_02_0957 + 24807261-24807311,24807436-24807773,24808727-248089... 27 9.3
11_06_0080 - 19880319-19880957,19881800-19881948,19882266-198835... 27 9.3
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 27 9.3
07_01_0559 + 4151054-4151178,4151306-4153018,4153121-4153412,415... 27 9.3
05_03_0184 + 9339939-9340896,9341003-9341083,9341166-9341383,934... 27 9.3
03_02_0173 + 6138406-6138628,6139769-6139857,6139922-6140608,614... 27 9.3
02_05_0844 - 32144417-32144764,32145588-32145686,32146218-321464... 27 9.3
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 139 bits (336), Expect = 2e-33
Identities = 64/92 (69%), Positives = 74/92 (80%)
Frame = +2
Query: 251 KDCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 430
K+ GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++S
Sbjct: 78 KNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLS 137
Query: 431 VHSSDRWKAQVIEALRRAKFKFPGRQRSTYQR 526
V + EALRRAKFKFPGRQ+ + R
Sbjct: 138 VRCKESNAKHAEEALRRAKFKFPGRQKIIHSR 169
Score = 133 bits (321), Expect = 1e-31
Identities = 58/78 (74%), Positives = 65/78 (83%)
Frame = +3
Query: 27 RRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQLSS 206
RRPARCYR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +SS
Sbjct: 3 RRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSS 62
Query: 207 EALEAGRICCNKYLVKTA 260
EALEA RI CNKY+ K A
Sbjct: 63 EALEAARIACNKYMTKNA 80
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 496 PRTSKIYVSKKWGFTKYERDEFLE 567
P KI S+KWGFTK+ R+E+++
Sbjct: 160 PGRQKIIHSRKWGFTKFTREEYVK 183
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 137 bits (331), Expect = 8e-33
Identities = 63/87 (72%), Positives = 70/87 (80%)
Frame = +2
Query: 251 KDCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 430
K GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++S
Sbjct: 74 KSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLS 133
Query: 431 VHSSDRWKAQVIEALRRAKFKFPGRQR 511
V EALRRAKFKFPGRQ+
Sbjct: 134 VRCKPNNAVHASEALRRAKFKFPGRQK 160
Score = 118 bits (283), Expect = 5e-27
Identities = 51/73 (69%), Positives = 60/73 (82%)
Frame = +3
Query: 42 CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQLSSEALEA 221
CYR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+F CVHLVS E E ++SEALEA
Sbjct: 4 CYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEA 63
Query: 222 GRICCNKYLVKTA 260
RI CNKY+ K+A
Sbjct: 64 ARIACNKYMTKSA 76
Score = 35.1 bits (77), Expect = 0.046
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 496 PRTSKIYVSKKWGFTKYERDEFL 564
P KI S+KWGFTK+ RDE++
Sbjct: 156 PGRQKIIESRKWGFTKFSRDEYV 178
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 136 bits (329), Expect = 1e-32
Identities = 64/87 (73%), Positives = 70/87 (80%)
Frame = +2
Query: 251 KDCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 430
K GKD FH+R+ HP+HV+RINKMLSCAGADRLQTGMRGAFGKP GT ARVRIGQ ++S
Sbjct: 385 KHAGKDAFHLRVCAHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTGTCARVRIGQVLLS 444
Query: 431 VHSSDRWKAQVIEALRRAKFKFPGRQR 511
V D A EALRRAKFKFPGRQR
Sbjct: 445 VRCRDANAAHAQEALRRAKFKFPGRQR 471
Score = 131 bits (316), Expect = 5e-31
Identities = 57/76 (75%), Positives = 64/76 (84%)
Frame = +3
Query: 33 PARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQLSSEA 212
P RCYR KNKPYPKSR+CRGVPDPKIRIFD+G+K+ + DDFPLCVHLVS E E +SSEA
Sbjct: 312 PVRCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEA 371
Query: 213 LEAGRICCNKYLVKTA 260
LEA RI CNKY+ K A
Sbjct: 372 LEAARIACNKYMAKHA 387
Score = 33.5 bits (73), Expect = 0.14
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 496 PRTSKIYVSKKWGFTKYERDEFLE 567
P ++ S KWGFT+++RDE+L+
Sbjct: 467 PGRQRVIFSAKWGFTRFKRDEYLK 490
>09_06_0319 - 22293869-22293906,22294539-22295808
Length = 435
Score = 30.7 bits (66), Expect = 1.00
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 377 GKPQGTVARVRIGQPIMSVHSSD 445
G PQ T+ R+ +G P +S+HS D
Sbjct: 343 GTPQPTLERLHVGHPTLSLHSDD 365
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 30.7 bits (66), Expect = 1.00
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -3
Query: 423 MGCPMRTRATVP*GLPNAPRIPVWSLSAPAH 331
+ CP+ + + VP LP++P P++S ++P +
Sbjct: 1625 LSCPLTSPSYVPTSLPHSPTSPIYSATSPIY 1655
>11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931
Length = 478
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 420 PSCPCTLVTGGRHRSSRLCAVPSSSSPDVKDLRIKEV 530
P P L GRH +R+ +S S + DLR++E+
Sbjct: 210 PESPRWLAMRGRHADARVVLARTSDSAEEADLRLEEI 246
>09_06_0318 - 22274966-22275144,22275846-22276812,22276890-22277093
Length = 449
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 377 GKPQGTVARVRIGQPIMSVHSSD 445
G PQ T+ R+ +G P +S+HS D
Sbjct: 309 GTPQQTLERLHVGLPKLSLHSDD 331
>01_01_0762 +
5889925-5890136,5891110-5891273,5891755-5891878,
5891941-5892073,5892629-5892732,5892867-5895780,
5895876-5895965,5896251-5896355,5896633-5896740,
5896826-5896876
Length = 1334
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = -2
Query: 622 VTGNDAAVIGEGGPSLTKLLKTHHVHTL*NPTSLIRRSLTSGELELGTAQSLDDLCLPPV 443
+T A G SL++ T V + NP ++ R S S + L + + D V
Sbjct: 243 LTSRHFATPSTDGRSLSENRSTSDVRS--NPDNISRSSSFSSKARLSFTEQVLDTKPTVV 300
Query: 442 TRVHGHDGLSNAN 404
+GHD LSN N
Sbjct: 301 PHENGHDKLSNNN 313
>05_01_0508 + 4242705-4242886,4243129-4243234,4246179-4246517
Length = 208
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = -2
Query: 316 DADNVERVKSHADMELILSAVFTRYLLQQIR-----PASKASELSCSYSSDTKCTHSGKS 152
+ DN+ V AD L+++A +++Q + PA+ A+ C+ S TK H G+
Sbjct: 143 NCDNLPVVPLGADQPLVMAACKRAAVIKQQQQASSSPATAAAAAQCAVPSSTKAIHVGEE 202
Query: 151 S 149
+
Sbjct: 203 A 203
>09_02_0483 + 9796395-9796409,9796754-9797251
Length = 170
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3
Query: 504 RPGNLNLARRRASMTCAFHLSLECTDMMGCPMRTRATVP 388
R G L L+ +ASM C H + CTD+ R ATVP
Sbjct: 27 RNGTLFLSPSQASM-CRSHYLIACTDLHVLVDRPDATVP 64
>09_01_0079 -
1159963-1160211,1160303-1160509,1160631-1160801,
1161732-1161869,1162184-1162273,1162354-1162431,
1162510-1163166,1163245-1163363,1164305-1164584
Length = 662
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 520 SKKWGFTKYERDEFLEASLKK 582
SK +GF +YERDE +A++ K
Sbjct: 167 SKGYGFVQYERDEAAQAAIDK 187
>08_02_0567 + 18769742-18769790,18769928-18771351
Length = 490
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +2
Query: 362 MRGAFGKPQG--TVARVRIGQPIMSVHSSDRW-KAQVIEALRRAKFKFPGRQR 511
MR G+ G A +RI + I + ++++ +AQV+EA RR F+ PGR R
Sbjct: 24 MRTNGGEQMGGSEAAHIRIDEIIRRLDAAEKEAQAQVVEA-RREIFRVPGRHR 75
>04_01_0289 +
3830052-3831134,3831141-3831230,3831494-3831525,
3833690-3834623
Length = 712
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 144 NVDDFPLCVHLVSDEYEQLSSEALEAGR-ICC 236
NV++ P + L+ DE +++ E L AGR I C
Sbjct: 679 NVEEIPTSMDLMKDENDKIQLEILTAGRNIAC 710
>02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142
Length = 534
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 347 RLQTGMRGAFGKPQGTVARVRIGQPIMSVHSSD 445
RLQ ++ G + T+ R+ G P +S+H SD
Sbjct: 434 RLQPNLKQGTGTTRLTLKRLHAGYPALSLHDSD 466
>09_06_0320 - 22297579-22297760,22298433-22299358,22299422-22299747,
22300591-22300660,22301632-22301726,22301917-22302048,
22302154-22302222,22302953-22303051,22303169-22303253,
22303353-22303453,22303660-22303728,22303861-22303901,
22304085-22304303,22304444-22304470,22304562-22304660,
22304898-22305106,22305382-22305485,22305753-22305894,
22305991-22306289,22306508-22306903
Length = 1229
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 377 GKPQGTVARVRIGQPIMSVHSSD 445
G PQ T+ R+ +G P +S+ S+D
Sbjct: 1089 GTPQQTLERLHVGHPTLSLQSND 1111
>12_02_0957 +
24807261-24807311,24807436-24807773,24808727-24808927,
24809024-24809069,24809284-24809600,24809949-24810072,
24810465-24810537,24810968-24811173,24811384-24811651,
24811780-24811877,24812116-24812379
Length = 661
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 250 TRYLLQQIRPASKASELSCSYSSDTKCTHSGKSS 149
+R+ ++ P+ ELSC ++T C H G S
Sbjct: 85 SRFKVRIFNPSGCEKELSCVMMNNTPCGHEGSMS 118
>11_06_0080 -
19880319-19880957,19881800-19881948,19882266-19883589,
19883766-19883953,19884034-19884499
Length = 921
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 377 GKPQGTVARVRIGQPIMSVHSSD 445
G PQ T+ R+ G P++S+H D
Sbjct: 579 GIPQLTMVRLHTGHPVLSMHDHD 601
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 159 PLC-VHLVSDEYEQLSSEALEAGRICCNKYLVK 254
P C +HL SD Y S E ++AG+ C L K
Sbjct: 592 PRCDIHLKSDGYTNYSLETVQAGKQQCKAALQK 624
>07_01_0559 +
4151054-4151178,4151306-4153018,4153121-4153412,
4154327-4154636,4155041-4155261
Length = 886
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -1
Query: 311 G*RGKGEVSCGYGTD--PFRSLYEVLIAADTSCLQSL 207
G R E SC Y + P +L E+L+ A+T C L
Sbjct: 231 GMRAVSEFSCTYSLEDLPLETLLEILVFANTFCCDRL 267
>05_03_0184 +
9339939-9340896,9341003-9341083,9341166-9341383,
9341796-9342019,9342409-9343096
Length = 722
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +3
Query: 162 LCVHLVSDEYEQLSSEALEAGRICCNKYLV---KTAERISSISA*DFTLSTLSASIKCYR 332
+C + + ++ + A R+CCN+ + +TA+ IS + ++S+LS+S K
Sbjct: 314 ICAKIPGSPGKPPTARFVSALRVCCNRENILNQETAQNISKVVTWKRSVSSLSSSSKSPL 373
Query: 333 ALELIGSRLG 362
+I +G
Sbjct: 374 TAAMITDDVG 383
>03_02_0173 +
6138406-6138628,6139769-6139857,6139922-6140608,
6140682-6140834,6140922-6141290
Length = 506
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 586 GPSLTKLLKTHHVHTL*NPTSLIRRSLTSGELELGTAQSLDDLCLP 449
G S TK L H L N TSL +L + +E + S D+CLP
Sbjct: 419 GFSSTKSLVELTCHILQNTTSLECLTLDTTRIEFRCSDSSVDVCLP 464
>02_05_0844 -
32144417-32144764,32145588-32145686,32146218-32146410,
32147049-32147107,32147189-32147263,32147557-32147670,
32147776-32147895,32148204-32148216,32148421-32148512,
32149078-32149164,32149254-32149328,32149630-32149680,
32149852-32149947,32150135-32150221,32150312-32150368,
32150475-32150600,32150709-32150949,32151028-32151114,
32151260-32151637,32152847-32153187
Length = 912
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 162 VESRQRSLSSYPNRRYGSWDQVHPDRTSISDTVYFCSTG 46
+ S + + S GSW H D +++ DT+ CS+G
Sbjct: 758 MNSSNQQIGSPSEEDLGSWGH-HSDPSTVPDTILQCSSG 795
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,440,630
Number of Sequences: 37544
Number of extensions: 451543
Number of successful extensions: 1321
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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