Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31048
         (609 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    50   4e-08
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    29   0.010
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         29   0.12 
AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    29   0.12 
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    29   0.12 
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    29   0.12 
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    29   0.12 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   3.3  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    23   5.8  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    23   5.8  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    23   5.8  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   5.8  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 50.4 bits (115), Expect = 4e-08
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = +2

Query: 77  MRECISVHVGQAGVQIGNACWE 142
           MRECISVHVGQAGVQIGN CW+
Sbjct: 1   MRECISVHVGQAGVQIGNPCWD 22



 Score = 35.9 bits (79), Expect = 0.001
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +3

Query: 132 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAARTPC 269
           P    T WS AS+   RCP+TR S  E +++  + + P LA  + C
Sbjct: 19  PCWDCTVWSMASNRTVRCPRTRRS--EAVMTRSTPSSPRLAQASTC 62


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 29.5 bits (63), Expect(2) = 0.010
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 183 CPQTRPSGVETILSTLSSARPELAARTPCCLR 278
           C   RPS ++   ++ S  RP+LAA +  C R
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAANSATCWR 195



 Score = 21.8 bits (44), Expect(2) = 0.010
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 126 VMPAGSFTAWSTASSLMARCPQTRPSGV 209
           V+ AG F AW TA        +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = -1

Query: 537 LGKLTPEAGTSTERSGRSGILADRYTGQRVL 445
           LG  TPEA  +T  S  SGI  D   GQ VL
Sbjct: 19  LGCWTPEATAATATSTLSGIYVDNGVGQTVL 49


>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 395 HYTIGKEIVDLVLDRIRK 448
           HYT G E+VD VLD +RK
Sbjct: 1   HYTEGAELVDAVLDVVRK 18


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 395 HYTIGKEIVDLVLDRIRK 448
           HYT G E+VD VLD +RK
Sbjct: 1   HYTEGAELVDAVLDVVRK 18


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 395 HYTIGKEIVDLVLDRIRK 448
           HYT G E+VD VLD +RK
Sbjct: 1   HYTEGAELVDAVLDVVRK 18


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 395 HYTIGKEIVDLVLDRIRK 448
           HYT G E+VD VLD +RK
Sbjct: 1   HYTEGAELVDAVLDVVRK 18


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 13/52 (25%), Positives = 22/52 (42%)
 Frame = -1

Query: 570 PRN*KGEPPIKLGKLTPEAGTSTERSGRSGILADRYTGQRVLRILSKTKSTI 415
           P N    P   + ++ PE G +TE +        R     +L I+S  K+ +
Sbjct: 822 PSNIPVHPYCNVPEVVPETGPTTEAASHVRSAEGRTVDDELLEIISDFKNNV 873


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 493 WKIRNPCRPVHWSASLADSVQNQI 422
           W++ +P    H  A+L +SVQN I
Sbjct: 113 WQLPDPAAIRHDWATLTESVQNHI 136


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 493 WKIRNPCRPVHWSASLADSVQNQI 422
           W++ +P    H  A+L +SVQN I
Sbjct: 89  WQLPDPAAIRHDWATLTESVQNHI 112


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 493 WKIRNPCRPVHWSASLADSVQNQI 422
           W++ +P    H  A+L +SVQN I
Sbjct: 86  WQLPDPAAIRHDWATLTESVQNHI 109


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 601 RLANPKFKIFSPKLKGRAAHQIRE 530
           RLA+  +KI + K+    AHQ+RE
Sbjct: 707 RLADADYKIVAHKVVPWFAHQLRE 730


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,368
Number of Sequences: 2352
Number of extensions: 14915
Number of successful extensions: 38
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)