Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31048
(609 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 175 2e-44
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 175 2e-44
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 175 2e-44
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 173 6e-44
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 155 2e-38
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 155 3e-38
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 153 1e-37
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 153 1e-37
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 151 3e-37
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 151 3e-37
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 150 9e-37
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 150 9e-37
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 136 9e-33
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 134 5e-32
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 125 3e-29
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 91 8e-19
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 79 2e-15
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 79 2e-15
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 79 2e-15
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 79 3e-15
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 78 4e-15
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 75 3e-14
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 69 3e-12
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 69 3e-12
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 36 0.017
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 36 0.017
Z29094-16|CAA82345.2| 184|Caenorhabditis elegans Hypothetical p... 28 4.5
AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical ... 28 4.5
AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical ... 28 4.5
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 175 bits (427), Expect = 2e-44
Identities = 81/124 (65%), Positives = 91/124 (73%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P S F L +GKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 437 RIRK 448
RIR+
Sbjct: 121 RIRR 124
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSFRWKYRLLGLTSLI*WAALPFNFGEK 575
RLAD CTGLQGFL+FHSF G TSL+ L ++G+K
Sbjct: 124 RLADNCTGLQGFLVFHSFGGGTG-SGFTSLL-MERLSVDYGKK 164
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 175 bits (427), Expect = 2e-44
Identities = 81/124 (65%), Positives = 91/124 (73%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P S F L +GKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 437 RIRK 448
RIR+
Sbjct: 121 RIRR 124
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSFRWKYRLLGLTSLI*WAALPFNFGEK 575
RLAD CTGLQGFL+FHSF G TSL+ L ++G+K
Sbjct: 124 RLADNCTGLQGFLVFHSFGGGTG-SGFTSLL-MERLSVDYGKK 164
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 175 bits (427), Expect = 2e-44
Identities = 81/124 (65%), Positives = 91/124 (73%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P S F L +GKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 437 RIRK 448
RIR+
Sbjct: 121 RIRR 124
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSFRWKYRLLGLTSLI*WAALPFNFGEK 575
RLAD CTGLQGFL+FHSF G TSL+ L ++G+K
Sbjct: 124 RLADNCTGLQGFLVFHSFGGGTG-SGFTSLL-MERLSVDYGKK 164
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 173 bits (422), Expect = 6e-44
Identities = 80/123 (65%), Positives = 90/123 (73%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 259
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 260 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLDR 439
P S F L +GKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 440 IRK 448
IR+
Sbjct: 121 IRR 123
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSFRWKYRLLGLTSLI*WAALPFNFGEK 575
RLAD CTGLQGFL+FHSF G TSL+ L ++G+K
Sbjct: 123 RLADNCTGLQGFLVFHSFGGGTG-SGFTSLL-MERLSVDYGKK 163
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 155 bits (377), Expect = 2e-38
Identities = 72/125 (57%), Positives = 86/125 (68%)
Frame = +2
Query: 74 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 253
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 254 STYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVL 433
P + F L +GKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 434 DRIRK 448
DR+R+
Sbjct: 125 DRVRR 129
Score = 35.1 bits (77), Expect = 0.040
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
RL + C GLQGFL+FHSF
Sbjct: 129 RLVENCRGLQGFLVFHSF 146
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 155 bits (375), Expect = 3e-38
Identities = 71/124 (57%), Positives = 83/124 (66%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +G
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F L SGKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 437 RIRK 448
R+R+
Sbjct: 121 RVRR 124
Score = 35.1 bits (77), Expect = 0.040
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSFRWKYRLLGLTSLI*WAALPFNFGEK 575
RL ++C LQGFLIFHSF G TSL+ L ++G+K
Sbjct: 124 RLTERCQSLQGFLIFHSFGGGTG-SGFTSLV-MERLSIDYGKK 164
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 153 bits (370), Expect = 1e-37
Identities = 73/124 (58%), Positives = 83/124 (66%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F + +GKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 437 RIRK 448
RIR+
Sbjct: 119 RIRR 122
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSFRWKYRLLGLTSLI*WAALPFNFGEK 575
RLAD C+GLQGF +FHSF G TSL+ L ++G+K
Sbjct: 122 RLADNCSGLQGFFVFHSFGGGTG-SGFTSLL-MERLSVDYGKK 162
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 153 bits (370), Expect = 1e-37
Identities = 73/124 (58%), Positives = 83/124 (66%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F + +GKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 437 RIRK 448
RIR+
Sbjct: 119 RIRR 122
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSFRWKYRLLGLTSLI*WAALPFNFGEK 575
RLAD C+GLQGF +FHSF G TSL+ L ++G+K
Sbjct: 122 RLADNCSGLQGFFVFHSFGGGTG-SGFTSLL-MERLSVDYGKK 162
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 151 bits (367), Expect = 3e-37
Identities = 72/124 (58%), Positives = 83/124 (66%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F + +GKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 437 RIRK 448
RIR+
Sbjct: 119 RIRR 122
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSFRWKYRLLGLTSLI*WAALPFNFGEK 575
RLAD C+GLQGF +FHSF G TSL+ L ++G+K
Sbjct: 122 RLADNCSGLQGFFVFHSFGGGTG-SGFTSLL-MERLSVDYGKK 162
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 151 bits (367), Expect = 3e-37
Identities = 72/124 (58%), Positives = 83/124 (66%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F + +GKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 437 RIRK 448
RIR+
Sbjct: 119 RIRR 122
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSFRWKYRLLGLTSLI*WAALPFNFGEK 575
RLAD C+GLQGF +FHSF G TSL+ L ++G+K
Sbjct: 122 RLADNCSGLQGFFVFHSFGGGTG-SGFTSLL-MERLSVDYGKK 162
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 150 bits (363), Expect = 9e-37
Identities = 71/124 (57%), Positives = 83/124 (66%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P + F + +GKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 437 RIRK 448
RIR+
Sbjct: 119 RIRR 122
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSFRWKYRLLGLTSLI*WAALPFNFGEK 575
RLAD C+GLQGF +FHSF G TSL+ L ++G+K
Sbjct: 122 RLADNCSGLQGFFVFHSFGGGTG-SGFTSLL-MERLSVDYGKK 162
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 150 bits (363), Expect = 9e-37
Identities = 71/124 (57%), Positives = 83/124 (66%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P + F + +GKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 437 RIRK 448
RIR+
Sbjct: 119 RIRR 122
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSFRWKYRLLGLTSLI*WAALPFNFGEK 575
RLAD C+GLQGF +FHSF G TSL+ L ++G+K
Sbjct: 122 RLADNCSGLQGFFVFHSFGGGTG-SGFTSLL-MERLSVDYGKK 162
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 136 bits (330), Expect = 9e-33
Identities = 68/124 (54%), Positives = 75/124 (60%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F + +GKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 437 RIRK 448
RIR+
Sbjct: 118 RIRR 121
Score = 34.7 bits (76), Expect = 0.052
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
RLA+ C GLQGF +FHSF
Sbjct: 121 RLANNCEGLQGFFVFHSF 138
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 134 bits (324), Expect = 5e-32
Identities = 64/123 (52%), Positives = 77/123 (62%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 259
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET G
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 260 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLDR 439
P S F L SGKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 440 IRK 448
+++
Sbjct: 128 VKR 130
Score = 36.3 bits (80), Expect = 0.017
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
RLA+ C GLQGF+IFHSF
Sbjct: 130 RLAENCNGLQGFVIFHSF 147
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 125 bits (301), Expect = 3e-29
Identities = 59/123 (47%), Positives = 75/123 (60%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 259
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ G
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 260 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLDR 439
P + F + + +GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 440 IRK 448
IRK
Sbjct: 125 IRK 127
Score = 31.5 bits (68), Expect = 0.49
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 456 DQCTGLQGFLIFHSF 500
+ C GLQGFL+FHSF
Sbjct: 130 ENCEGLQGFLVFHSF 144
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 90.6 bits (215), Expect = 8e-19
Identities = 44/102 (43%), Positives = 57/102 (55%)
Frame = +2
Query: 143 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYPVXXXXXXXXXXXXXXXXAH 322
++CLEHGIQPDG D T ++ NTFF+ET G P
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 323 TDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLDRIRK 448
S F L SGKEDAAN YARG YTIG+E++D+V+DR+++
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKR 102
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = +1
Query: 229 FLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 354
F +HVPR +FVDLEPTVVDEVRTGTYR LFHPEQL+
Sbjct: 30 FFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLL 71
Score = 36.3 bits (80), Expect = 0.017
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
RLA+ C GLQGF+IFHSF
Sbjct: 102 RLAENCNGLQGFVIFHSF 119
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 79.4 bits (187), Expect = 2e-15
Identities = 44/124 (35%), Positives = 58/124 (46%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E G
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F +N G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 437 RIRK 448
+RK
Sbjct: 119 VVRK 122
Score = 47.6 bits (108), Expect = 7e-06
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIFW*GRCGQQLCPWSLHHW 408
++VPRAV VDLEP +D VR+G + QLF P+ +F G W+ H+
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNN---WAKGHY 106
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 79.4 bits (187), Expect = 2e-15
Identities = 43/124 (34%), Positives = 59/124 (47%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F +N G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 437 RIRK 448
+RK
Sbjct: 119 VVRK 122
Score = 47.2 bits (107), Expect = 9e-06
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIFW*GRCGQQLCPWSLHHW 408
++VPRAV VDLEP +D VR+G + QLF P+ +F G W+ H+
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNN---WAKGHY 106
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 79.4 bits (187), Expect = 2e-15
Identities = 43/124 (34%), Positives = 59/124 (47%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F +N G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 437 RIRK 448
+RK
Sbjct: 119 VVRK 122
Score = 47.2 bits (107), Expect = 9e-06
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIFW*GRCGQQLCPWSLHHW 408
++VPRAV VDLEP +D VR+G + QLF P+ +F G W+ H+
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNN---WAKGHY 106
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 78.6 bits (185), Expect = 3e-15
Identities = 44/124 (35%), Positives = 59/124 (47%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E G
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDL--QLERIDVYYNEANNGK 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F +N G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 437 RIRK 448
IRK
Sbjct: 119 VIRK 122
Score = 47.6 bits (108), Expect = 7e-06
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIFW*GRCGQQLCPWSLHHW 408
++VPRAV VDLEP +D VR+G + QLF P+ +F G W+ H+
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNN---WAKGHY 106
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 78.2 bits (184), Expect = 4e-15
Identities = 44/124 (35%), Positives = 59/124 (47%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E G
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDL--QLERIDVYYNEANNGK 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F +N G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 437 RIRK 448
IRK
Sbjct: 119 VIRK 122
Score = 47.6 bits (108), Expect = 7e-06
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIFW*GRCGQQLCPWSLHHW 408
++VPRAV VDLEP +D VR+G + QLF P+ +F G W+ H+
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNN---WAKGHY 106
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 75.4 bits (177), Expect = 3e-14
Identities = 42/124 (33%), Positives = 56/124 (45%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F +N G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 437 RIRK 448
+RK
Sbjct: 119 VVRK 122
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 68.9 bits (161), Expect = 3e-12
Identities = 42/124 (33%), Positives = 54/124 (43%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F N SG+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 437 RIRK 448
IR+
Sbjct: 119 VIRR 122
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 68.9 bits (161), Expect = 3e-12
Identities = 42/124 (33%), Positives = 54/124 (43%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F N SG+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 437 RIRK 448
IR+
Sbjct: 119 VIRR 122
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 36.3 bits (80), Expect = 0.017
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Frame = +2
Query: 89 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP- 265
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + P
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 266 VXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKE--DAANNYARGHYTIGKEIVDLVLDR 439
+ + F +N++ A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 440 I 442
I
Sbjct: 124 I 124
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 229 FLQRDRSWQHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQL 351
F Q D +VPRAV VDLEP V++ +++ + LF+ + +
Sbjct: 53 FYQADDD-HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNI 93
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 36.3 bits (80), Expect = 0.017
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Frame = +2
Query: 89 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP- 265
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + P
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 266 VXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKE--DAANNYARGHYTIGKEIVDLVLDR 439
+ + F +N++ A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 440 I 442
I
Sbjct: 124 I 124
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 229 FLQRDRSWQHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQL 351
F Q D +VPRAV VDLEP V++ +++ + LF+ + +
Sbjct: 53 FYQADDD-HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNI 93
>Z29094-16|CAA82345.2| 184|Caenorhabditis elegans Hypothetical
protein C07A9.9 protein.
Length = 184
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -2
Query: 455 SESCGFCPKPNLRFPFQWCSDHGHSCWPHLPYQNI 351
SE C FC K R+ CSDH C H Y+ I
Sbjct: 70 SERCHFCMKRKGRWMGDDCSDHSSLC-KHCCYEMI 103
>AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical
protein T21D12.9c protein.
Length = 737
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 247 SWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 354
SW H P+ ++ L + + +G++R L E+LI
Sbjct: 310 SWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELI 345
>AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical
protein T21D12.9a protein.
Length = 881
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 247 SWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 354
SW H P+ ++ L + + +G++R L E+LI
Sbjct: 310 SWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELI 345
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,097,446
Number of Sequences: 27780
Number of extensions: 342526
Number of successful extensions: 1028
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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