Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31048
(609 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 185 2e-47
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 185 2e-47
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 184 5e-47
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 184 5e-47
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 165 2e-41
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 165 2e-41
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 157 7e-39
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 80 1e-15
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 80 1e-15
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 78 4e-15
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 78 4e-15
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 77 7e-15
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 77 9e-15
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 76 2e-14
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 75 5e-14
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 74 6e-14
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 52 3e-07
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 52 4e-07
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 30 1.4
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 30 1.4
At1g77640.1 68414.m09039 AP2 domain-containing transcription fac... 29 1.8
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 2.4
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 29 3.2
At5g56410.1 68418.m07041 F-box family protein contains F-box dom... 28 4.2
At2g38650.1 68415.m04747 glycosyl transferase family 8 protein c... 27 7.4
At5g20060.2 68418.m02389 phospholipase/carboxylesterase family p... 27 9.7
At5g20060.1 68418.m02388 phospholipase/carboxylesterase family p... 27 9.7
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 27 9.7
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 27 9.7
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 27 9.7
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 27 9.7
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 27 9.7
At3g62850.1 68416.m07061 zinc finger protein-related contains Pf... 27 9.7
At3g03230.1 68416.m00319 esterase/lipase/thioesterase family pro... 27 9.7
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 185 bits (450), Expect = 2e-47
Identities = 84/124 (67%), Positives = 92/124 (74%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F L SGKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 437 RIRK 448
RIRK
Sbjct: 121 RIRK 124
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHS 497
+LAD CTGLQGFL+F++
Sbjct: 124 KLADNCTGLQGFLVFNA 140
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 185 bits (450), Expect = 2e-47
Identities = 84/124 (67%), Positives = 92/124 (74%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F L SGKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 437 RIRK 448
RIRK
Sbjct: 121 RIRK 124
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHS 497
+LAD CTGLQGFL+F++
Sbjct: 124 KLADNCTGLQGFLVFNA 140
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 184 bits (447), Expect = 5e-47
Identities = 84/124 (67%), Positives = 91/124 (73%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F L SGKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 437 RIRK 448
RIRK
Sbjct: 121 RIRK 124
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHS 497
+LAD CTGLQGFL+F++
Sbjct: 124 KLADNCTGLQGFLVFNA 140
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 184 bits (447), Expect = 5e-47
Identities = 84/124 (67%), Positives = 91/124 (73%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F L SGKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 437 RIRK 448
RIRK
Sbjct: 121 RIRK 124
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHS 497
+LAD CTGLQGFL+F++
Sbjct: 124 KLADNCTGLQGFLVFNA 140
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 165 bits (402), Expect = 2e-41
Identities = 75/124 (60%), Positives = 86/124 (69%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAG
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F L SGKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 437 RIRK 448
R+RK
Sbjct: 121 RVRK 124
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHS 497
+LAD CTGLQGFL+F++
Sbjct: 124 KLADNCTGLQGFLVFNA 140
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 165 bits (402), Expect = 2e-41
Identities = 75/124 (60%), Positives = 86/124 (69%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAG
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F L SGKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 437 RIRK 448
R+RK
Sbjct: 121 RVRK 124
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHS 497
+LAD CTGLQGFL+F++
Sbjct: 124 KLADNCTGLQGFLVFNA 140
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 157 bits (380), Expect = 7e-39
Identities = 70/124 (56%), Positives = 84/124 (67%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F L SGKEDAANN+ARGHYT+G+EIVD L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 437 RIRK 448
R+RK
Sbjct: 121 RLRK 124
Score = 34.3 bits (75), Expect = 0.064
Identities = 23/49 (46%), Positives = 30/49 (61%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSFRWKYRLLGLTSLI*WAALPFNFGEKILNLGF 593
+LAD CTGLQGFL+F++ GL SL+ L +FG+K LGF
Sbjct: 124 KLADNCTGLQGFLVFNAVGGGTG-SGLGSLL-LERLSVDFGKK-SKLGF 169
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 79.8 bits (188), Expect = 1e-15
Identities = 42/124 (33%), Positives = 58/124 (46%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F +N G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 437 RIRK 448
+RK
Sbjct: 119 VVRK 122
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 79.8 bits (188), Expect = 1e-15
Identities = 42/124 (33%), Positives = 58/124 (46%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F +N G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 437 RIRK 448
+RK
Sbjct: 119 VVRK 122
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 78.2 bits (184), Expect = 4e-15
Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 247
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEAS 55
Query: 248 AGSTYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDL 427
G P F +N G+ A NN+A+GHYT G E++D
Sbjct: 56 CGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDA 115
Query: 428 VLDRIRK 448
VLD +RK
Sbjct: 116 VLDVVRK 122
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIFW*GRCGQQLCPWSLHHW 408
++VPRA+ +DLEP +D VRTG Y Q+F P+ +F G W+ H+
Sbjct: 58 RYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNN---WAKGHY 106
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 78.2 bits (184), Expect = 4e-15
Identities = 42/124 (33%), Positives = 58/124 (46%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + N +++E G
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGR 59
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F +N G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 437 RIRK 448
+RK
Sbjct: 120 VVRK 123
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIFW*GRCGQQLCPWSLHHW 408
++VPRAV +DLEP +D +R+G Y Q+F P+ +F G W+ H+
Sbjct: 59 RYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNN---WAKGHY 107
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 77.4 bits (182), Expect = 7e-15
Identities = 43/124 (34%), Positives = 57/124 (45%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGK 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F +N G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 437 RIRK 448
+RK
Sbjct: 119 VVRK 122
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 77.0 bits (181), Expect = 9e-15
Identities = 42/124 (33%), Positives = 58/124 (46%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F +N G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 437 RIRK 448
+RK
Sbjct: 120 VVRK 123
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 75.8 bits (178), Expect = 2e-14
Identities = 42/124 (33%), Positives = 57/124 (45%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGK 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F +N G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 437 RIRK 448
+RK
Sbjct: 119 VVRK 122
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 74.5 bits (175), Expect = 5e-14
Identities = 40/124 (32%), Positives = 57/124 (45%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGR 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F +N G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 437 RIRK 448
+RK
Sbjct: 119 VVRK 122
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +1
Query: 259 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIFW*GRCGQQLCPWSLHHW 408
VPRAV +DLEP +D VR+G Y Q+F P+ +F G W+ H+
Sbjct: 60 VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNN---WAKGHY 106
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 74.1 bits (174), Expect = 6e-14
Identities = 41/124 (33%), Positives = 58/124 (46%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGR 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F +N G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 437 RIRK 448
+RK
Sbjct: 119 VVRK 122
Score = 47.2 bits (107), Expect = 8e-06
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIFW*GRCGQQLCPWSLHHW 408
++VPRAV +DLEP +D VR+G Y Q+F P+ +F G W+ H+
Sbjct: 58 RYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNN---WAKGHY 106
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 52.0 bits (119), Expect = 3e-07
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 259
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 260 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKE--DAANNYARGHYTIGKEIVDLVL 433
P + + N++ A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 434 DRI 442
D I
Sbjct: 120 DMI 122
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 51.6 bits (118), Expect = 4e-07
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 259
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 260 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKE--DAANNYARGHYTIGKEIVDLVL 433
P + + N++ A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 434 DRI 442
D I
Sbjct: 120 DMI 122
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 29.9 bits (64), Expect = 1.4
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = -2
Query: 446 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQNIS 348
C P PN + PF+W ++ + ++P++ +S
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHKELS 168
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 29.9 bits (64), Expect = 1.4
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = -2
Query: 446 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQNIS 348
C P PN + PF+W ++ + ++P++ +S
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHKELS 185
>At1g77640.1 68414.m09039 AP2 domain-containing transcription
factor, putative Similar to DREB1A (GP:3660548)
[Arabidopsis thaliana]
Length = 244
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 470 SARIPDLPLLSVEVPASGVNFPNLMGGSPF 559
+AR D LL ++ P + +NFPN+ SPF
Sbjct: 78 AARAYDAALLCLKGPKANLNFPNITTTSPF 107
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 246 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 121
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = -1
Query: 360 PEYKLFWMKQLSVCASADLINNSRFKIDEDSTGYVLPAPVSLKKVLKESSPPPM 199
P+ LF LS+ S N R K S+ L APV L + SSPPP+
Sbjct: 20 PQQTLFIPYTLSLPISYQ--NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At5g56410.1 68418.m07041 F-box family protein contains F-box domain
Pfam:PF00646
Length = 503
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 244 RSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIFW 360
R W+ + + + + P V++ +R Y +LF PE + W
Sbjct: 76 RMWRFIDKNLPLHSSP-VIESLRLTIYNELFQPESINLW 113
>At2g38650.1 68415.m04747 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 619
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 511 YFHRKEWKIRNPCR 470
YF K+W IRNPC+
Sbjct: 366 YFAMKQWFIRNPCK 379
>At5g20060.2 68418.m02389 phospholipase/carboxylesterase family
protein similar to lysophospholipase II [Mus musculus]
GI:4589453; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 252
Score = 27.1 bits (57), Expect = 9.7
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Frame = -1
Query: 339 MKQLSVCAS--ADLINNSRFKIDEDSTGYVLPAPVSLKKVL-------KESSPPPMVLSV 187
M+ L V A+ A+L++N I G+ + A SL +P P+ LS
Sbjct: 98 MEGLDVAAAHVANLLSNEPADIKLGVGGFSMGAATSLYSATCFALGKYGNGNPYPINLSA 157
Query: 186 GIWPSGWMPCSR 151
I SGW+PC++
Sbjct: 158 IIGLSGWLPCAK 169
>At5g20060.1 68418.m02388 phospholipase/carboxylesterase family
protein similar to lysophospholipase II [Mus musculus]
GI:4589453; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 252
Score = 27.1 bits (57), Expect = 9.7
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Frame = -1
Query: 339 MKQLSVCAS--ADLINNSRFKIDEDSTGYVLPAPVSLKKVL-------KESSPPPMVLSV 187
M+ L V A+ A+L++N I G+ + A SL +P P+ LS
Sbjct: 98 MEGLDVAAAHVANLLSNEPADIKLGVGGFSMGAATSLYSATCFALGKYGNGNPYPINLSA 157
Query: 186 GIWPSGWMPCSR 151
I SGW+PC++
Sbjct: 158 IIGLSGWLPCAK 169
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 241 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 71
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 241 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 71
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 241 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 71
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 241 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 71
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 188 WASGHQAGCRAPGSKAPSRHYRSGLR 111
W+SGHQ CR G + ++GLR
Sbjct: 90 WSSGHQRNCRDYGITTLTPSAKNGLR 115
>At3g62850.1 68416.m07061 zinc finger protein-related contains Pfam
profiles PF04396: Protein of unknown function DUF537,
weak hit to PF00096: Zinc finger, C2H2 type
Length = 472
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 547 AHQIREVNPRSRYFHRKEWKIRNP 476
AH I EV + + K+WK RNP
Sbjct: 304 AHSIDEVIYSRMFINMKQWKARNP 327
>At3g03230.1 68416.m00319 esterase/lipase/thioesterase family
protein contains Interpro entry IPR000379
Length = 333
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 388 PWSLHHWKGNRRFGFGQNPQDSLT 459
PW L+ W + F +NP+D++T
Sbjct: 196 PWLLYWWMTQKWFPNSRNPKDTMT 219
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,395,275
Number of Sequences: 28952
Number of extensions: 324729
Number of successful extensions: 1005
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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