Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31046
(464 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 89 5e-18
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 89 9e-18
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 87 2e-17
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 87 2e-17
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 87 2e-17
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 87 2e-17
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 87 2e-17
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 87 2e-17
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 87 2e-17
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 87 2e-17
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 87 2e-17
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 87 2e-17
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 79 6e-15
AK098809-1|BAC05419.1| 320|Homo sapiens protein ( Homo sapiens ... 30 3.4
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 89.4 bits (212), Expect = 5e-18
Identities = 45/99 (45%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
Frame = +2
Query: 5 EKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPN 178
+K K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R +
Sbjct: 84 KKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRAS 143
Query: 179 LKIGTVCILLAGRHAGKRVVLVGILPAVCF*LLDLLLSI 295
+ GT+ I+L GRH GKRVV + L + + DL SI
Sbjct: 144 ITPGTILIILTGRHRGKRVVFLKQLASGLLLVTDLWSSI 182
Score = 58.0 bits (134), Expect = 1e-08
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +1
Query: 253 ASGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 399
ASGLLLVT ++ PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 169 ASGLLLVTDLWSSIEVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 88.6 bits (210), Expect = 9e-18
Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Frame = +2
Query: 5 EKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPN 178
+K K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R +
Sbjct: 23 KKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRAS 82
Query: 179 LKIGTVCILLAGRHAGKRVVLVGILPAVCF*LLDLLLSIRARY 307
+ GT+ I+L GRH GKRVV + L + + L+SI Y
Sbjct: 83 ITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVSIEFLY 125
Score = 30.3 bits (65), Expect = 3.4
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +1
Query: 253 ASGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 399
ASGLLLVTGP + + + K+PKH D YF
Sbjct: 108 ASGLLLVTGPLVSIEFLYEEHTRNLSLPLQPKSISAIVKIPKHLTDAYF 156
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 87.4 bits (207), Expect = 2e-17
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +2
Query: 5 EKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPN 178
+K K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R +
Sbjct: 84 KKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRAS 143
Query: 179 LKIGTVCILLAGRHAGKRVVLV 244
+ GT+ I+L GRH GKRVV +
Sbjct: 144 ITPGTILIILTGRHRGKRVVFL 165
Score = 68.1 bits (159), Expect = 1e-11
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = +1
Query: 253 ASGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 399
ASGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 169 ASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 87.4 bits (207), Expect = 2e-17
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +2
Query: 5 EKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPN 178
+K K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R +
Sbjct: 84 KKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRAS 143
Query: 179 LKIGTVCILLAGRHAGKRVVLV 244
+ GT+ I+L GRH GKRVV +
Sbjct: 144 ITPGTILIILTGRHRGKRVVFL 165
Score = 68.1 bits (159), Expect = 1e-11
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = +1
Query: 253 ASGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 399
ASGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 169 ASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 87.4 bits (207), Expect = 2e-17
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +2
Query: 5 EKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPN 178
+K K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R +
Sbjct: 84 KKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRAS 143
Query: 179 LKIGTVCILLAGRHAGKRVVLV 244
+ GT+ I+L GRH GKRVV +
Sbjct: 144 ITPGTILIILTGRHRGKRVVFL 165
Score = 68.1 bits (159), Expect = 1e-11
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = +1
Query: 253 ASGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 399
ASGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 169 ASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 87.4 bits (207), Expect = 2e-17
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +2
Query: 5 EKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPN 178
+K K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R +
Sbjct: 84 KKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRAS 143
Query: 179 LKIGTVCILLAGRHAGKRVVLV 244
+ GT+ I+L GRH GKRVV +
Sbjct: 144 ITPGTILIILTGRHRGKRVVFL 165
Score = 68.1 bits (159), Expect = 1e-11
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = +1
Query: 253 ASGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 399
ASGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 169 ASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 87.4 bits (207), Expect = 2e-17
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +2
Query: 5 EKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPN 178
+K K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R +
Sbjct: 84 KKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRAS 143
Query: 179 LKIGTVCILLAGRHAGKRVVLV 244
+ GT+ I+L GRH GKRVV +
Sbjct: 144 ITPGTILIILTGRHRGKRVVFL 165
Score = 68.1 bits (159), Expect = 1e-11
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = +1
Query: 253 ASGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 399
ASGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 169 ASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 87.4 bits (207), Expect = 2e-17
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +2
Query: 5 EKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPN 178
+K K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R +
Sbjct: 84 KKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRAS 143
Query: 179 LKIGTVCILLAGRHAGKRVVLV 244
+ GT+ I+L GRH GKRVV +
Sbjct: 144 ITPGTILIILTGRHRGKRVVFL 165
Score = 68.1 bits (159), Expect = 1e-11
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = +1
Query: 253 ASGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 399
ASGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 169 ASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 87.4 bits (207), Expect = 2e-17
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +2
Query: 5 EKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPN 178
+K K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R +
Sbjct: 84 KKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRAS 143
Query: 179 LKIGTVCILLAGRHAGKRVVLV 244
+ GT+ I+L GRH GKRVV +
Sbjct: 144 ITPGTILIILTGRHRGKRVVFL 165
Score = 68.1 bits (159), Expect = 1e-11
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = +1
Query: 253 ASGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 399
ASGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 169 ASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 87.4 bits (207), Expect = 2e-17
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +2
Query: 5 EKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPN 178
+K K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R +
Sbjct: 84 KKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRAS 143
Query: 179 LKIGTVCILLAGRHAGKRVVLV 244
+ GT+ I+L GRH GKRVV +
Sbjct: 144 ITPGTILIILTGRHRGKRVVFL 165
Score = 68.1 bits (159), Expect = 1e-11
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = +1
Query: 253 ASGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 399
ASGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 169 ASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 87.4 bits (207), Expect = 2e-17
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +2
Query: 5 EKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPN 178
+K K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R +
Sbjct: 84 KKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRAS 143
Query: 179 LKIGTVCILLAGRHAGKRVVLV 244
+ GT+ I+L GRH GKRVV +
Sbjct: 144 ITPGTILIILTGRHRGKRVVFL 165
Score = 68.1 bits (159), Expect = 1e-11
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = +1
Query: 253 ASGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 399
ASGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 169 ASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 87.4 bits (207), Expect = 2e-17
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +2
Query: 5 EKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPN 178
+K K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R +
Sbjct: 84 KKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRAS 143
Query: 179 LKIGTVCILLAGRHAGKRVVLV 244
+ GT+ I+L GRH GKRVV +
Sbjct: 144 ITPGTILIILTGRHRGKRVVFL 165
Score = 68.1 bits (159), Expect = 1e-11
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = +1
Query: 253 ASGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 399
ASGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 169 ASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 79.4 bits (187), Expect = 6e-15
Identities = 37/81 (45%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Frame = +2
Query: 5 EKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPN 178
+K K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R +
Sbjct: 84 KKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRAS 143
Query: 179 LKIGTVCILLAGRHAGKRVVL 241
+ GT+ I+L GR GK V+
Sbjct: 144 ITPGTILIILTGRRRGKNWVV 164
Score = 68.1 bits (159), Expect = 1e-11
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = +1
Query: 253 ASGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 399
ASGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 170 ASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 218
>AK098809-1|BAC05419.1| 320|Homo sapiens protein ( Homo sapiens
cDNA FLJ25943 fis, clone JTH10559. ).
Length = 320
Score = 30.3 bits (65), Expect = 3.4
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = +1
Query: 103 PHSGENPCFIWWPSIQ--QACTQDPTQP---EDRNCLHSPRW*TCRQEGCTCWNSASGLL 267
P +GE C W + ++C QD P E CLH C+ C A G
Sbjct: 176 PMNGECSCLPGWAGLHCNESCPQDTHGPGCQEHCLCLHGG---VCQATSGLC-QCAPGY- 230
Query: 268 LVTGPFAFNSCPLRRIPQRYV 330
TGP + CP R P+R++
Sbjct: 231 --TGPHCASLCPPPRRPRRFL 249
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,086,649
Number of Sequences: 237096
Number of extensions: 1579908
Number of successful extensions: 3029
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3015
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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