Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31045
(703 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 23 1.8
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 3.2
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 4.2
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 4.2
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 22 4.2
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 4.2
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 4.2
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 4.2
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 4.2
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 4.2
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 22 5.6
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 21 7.4
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 21 7.4
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 21 7.4
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 21 7.4
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 21 9.7
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 9.7
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1
Query: 277 CGGVCHHSIPQH 242
CGG C + IP H
Sbjct: 300 CGGECEYPIPDH 311
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 21 TQRIGVAKGPDFSPQSCQPPLLYP 92
T++ G S QS PP +YP
Sbjct: 179 TEKAGTNNNNSKSSQSSNPPQIYP 202
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 21 TQRIGVAKGPDFSPQSCQPPLLYP 92
T++ G S QS PP +YP
Sbjct: 179 TEKAGTNNNNSKSGQSSNPPQIYP 202
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 21 TQRIGVAKGPDFSPQSCQPPLLYP 92
T++ G S QS PP +YP
Sbjct: 179 TEKAGTNNNNSKSGQSSNPPQIYP 202
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 166 VTPMVNLELTVSGMPDP*QVLSQPT 92
++P +N S P P Q+ +QPT
Sbjct: 317 MSPTINCWSLTSSPPPPYQISAQPT 341
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 21 TQRIGVAKGPDFSPQSCQPPLLYP 92
T++ G S QS PP +YP
Sbjct: 179 TEKAGTNNNNSKSGQSSNPPQIYP 202
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 21 TQRIGVAKGPDFSPQSCQPPLLYP 92
T++ G S QS PP +YP
Sbjct: 179 TEKAGTNNNNSKSGQSSNPPQIYP 202
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 21 TQRIGVAKGPDFSPQSCQPPLLYP 92
T++ G S QS PP +YP
Sbjct: 135 TEKAGTNNNNSKSGQSSNPPQIYP 158
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 21 TQRIGVAKGPDFSPQSCQPPLLYP 92
T++ G S QS PP +YP
Sbjct: 179 TEKAGTNNNNSKSGQSSNPPQIYP 202
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 21 TQRIGVAKGPDFSPQSCQPPLLYP 92
T++ G S QS PP +YP
Sbjct: 179 TEKAGTNNNNSKSGQSSNPPQIYP 202
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 191 VSPDGSLCASGGKDMK 238
VSP+GSL S ++M+
Sbjct: 18 VSPEGSLLPSNSREMR 33
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 389 WLKSSGLKSLTKRKLPRQT 445
W+K+ G S T K RQT
Sbjct: 171 WMKAHGDSSATGNKRTRQT 189
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -3
Query: 131 WDARPLTSSVPTHRVQ 84
W A P S PT++ Q
Sbjct: 178 WSATPQAGSTPTYQTQ 193
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 389 WLKSSGLKSLTKRKLPRQT 445
W+K+ G S T K RQT
Sbjct: 171 WMKAHGDSSATGNKRTRQT 189
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 389 WLKSSGLKSLTKRKLPRQT 445
W+K+ G S T K RQT
Sbjct: 171 WMKAHGDSSATGNKRTRQT 189
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 49 QIFHPNHANPHYCTL 93
+IF+ N ANP+ C +
Sbjct: 205 EIFNGNRANPNGCQI 219
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 49 QIFHPNHANPHYCTL 93
+IF+ N ANP+ C +
Sbjct: 212 EIFNGNRANPNGCQI 226
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,808
Number of Sequences: 336
Number of extensions: 4361
Number of successful extensions: 21
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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