Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31045
(703 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 96 5e-21
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 43 5e-05
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 38 0.001
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 37 0.002
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 36 0.004
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 36 0.007
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 36 0.007
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 34 0.017
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 34 0.023
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 33 0.030
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 33 0.040
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 33 0.052
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 33 0.052
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 33 0.052
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 32 0.069
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 31 0.12
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 31 0.12
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 31 0.12
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 31 0.12
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 31 0.12
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 31 0.21
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 31 0.21
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 31 0.21
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 31 0.21
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 30 0.28
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 30 0.28
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 30 0.28
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 30 0.37
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 30 0.37
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 29 0.49
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 29 0.49
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 29 0.49
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 29 0.49
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 29 0.85
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 29 0.85
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 29 0.85
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 29 0.85
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 28 1.1
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 28 1.1
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 28 1.1
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 27 2.0
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 27 2.0
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 27 2.0
SPCC16C4.08c |skb15||Shk1 kinase binding protein 15|Schizosaccha... 27 2.6
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 27 3.4
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 27 3.4
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 26 4.5
SPCP31B10.04 |||conserved fungal protein|Schizosaccharomyces pom... 26 4.5
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 26 4.5
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 26 6.0
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 26 6.0
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 26 6.0
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 26 6.0
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 26 6.0
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 26 6.0
SPCC1393.04 |fta4|sma6|Sim4 and Mal2 associated |Schizosaccharom... 25 7.9
SPBC409.08 |||spermine family transporter |Schizosaccharomyces p... 25 7.9
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 25 7.9
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 25 7.9
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 25 7.9
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 25 7.9
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 25 7.9
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 95.9 bits (228), Expect = 5e-21
Identities = 43/84 (51%), Positives = 61/84 (72%)
Frame = +1
Query: 256 NDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTS 435
N+ HL++L+ I AL FSPNRYWLCAA G SI+I+DLE++E V+EL + + +
Sbjct: 222 NESTHLYSLEAKANINALVFSPNRYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGK-- 279
Query: 436 KTDPPQCLSLAWSTDGQTLFAGYS 507
K+ P+C+SL WS DGQTLF+G++
Sbjct: 280 KSSEPECISLTWSPDGQTLFSGWT 303
Score = 69.3 bits (162), Expect = 5e-13
Identities = 34/80 (42%), Positives = 47/80 (58%)
Frame = +2
Query: 14 DGDPADWGCQGARFFTPIMPTPIIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTV 193
DG +DW F+P V G + + +VW L+ +H+GH+GY++ VT+
Sbjct: 144 DGGHSDW--VSCVRFSPNPDNLTFVSAGWDKAV-KVWDLETFSLRTSHYGHTGYVSAVTI 200
Query: 194 SPDGSLCASGGKDMKAMLWD 253
SPDGSLCASGG+D MLWD
Sbjct: 201 SPDGSLCASGGRDGTLMLWD 220
Score = 32.7 bits (71), Expect = 0.052
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +2
Query: 65 IMPTPIIVPCGLGQNLSRVWHPT-NCKLKINHWGHSGYLNTVTVS--PDGSLCASGGKDM 235
I P V G ++W+ NCK I GHS +++ V S PD S G D
Sbjct: 113 ISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDK 172
Query: 236 KAMLWD 253
+WD
Sbjct: 173 AVKVWD 178
Score = 28.7 bits (61), Expect = 0.85
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 116 RVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
R+W + GH+ + +V++SPD SG +D +W+
Sbjct: 88 RLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWN 133
Score = 28.7 bits (61), Expect = 0.85
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = +1
Query: 286 HNDIITALCFSPNR---YWLCAAFGPSIKIWDLES 381
H+D ++ + FSPN ++ A + ++K+WDLE+
Sbjct: 147 HSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLET 181
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 304 ALCFSPNRYWLCAAFGPSIKIWDLESKEMVEE 399
AL F + Y L A++ +I++WDLE E +
Sbjct: 70 ALSFD-SHYALSASWDKTIRLWDLEKGECTHQ 100
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 42.7 bits (96), Expect = 5e-05
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Frame = +2
Query: 92 CGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANT 271
CG G +VW K+ GH +NT+ + D S+ ASG D K LWD +N+
Sbjct: 74 CG-GDKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWD-CRSNS 131
Query: 272 STP*TTM------ISSLPCASHPTDTG 334
+P + +SS+ A H TG
Sbjct: 132 FSPIQVLADAKDSVSSIDIAEHLIVTG 158
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 38.3 bits (85), Expect = 0.001
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTSTP*TTMIS-SLPCASHPTDTGYV 340
HS + +V++S DG+LCA+ D A +WD + I+ L + Y+
Sbjct: 179 HSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKYL 238
Query: 341 LLSDLPSRSGIWKARR 388
L+S+L S+ +W RR
Sbjct: 239 LVSNLNSQIRLWDYRR 254
Score = 29.9 bits (64), Expect = 0.37
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 116 RVWH-PTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
R+W C ++ GH+ Y++++ +P G+L SG D +W+
Sbjct: 121 RIWDFEKRCSVRCLK-GHTNYVSSIDFNPLGTLLVSGSWDETVRIWN 166
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 286 HNDIITALCFSPNRYWLCAAFGP-SIKIW 369
H +T + SPN+ W+ + +IKIW
Sbjct: 53 HEKSVTCVSVSPNKRWIATSSSDGTIKIW 81
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 37.1 bits (82), Expect = 0.002
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 116 RVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
+VW + K+K + GH + V SPDG ASGG D +W
Sbjct: 456 KVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 32.3 bits (70), Expect = 0.069
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = +2
Query: 56 FTPIMPTPIIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDM 235
F+P + ++ G G +R+W GH+ +++ V +PD S+ A+G D
Sbjct: 142 FSPSTSSRLVT--GSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDN 199
Query: 236 KAMLWD 253
WD
Sbjct: 200 TIRFWD 205
Score = 32.3 bits (70), Expect = 0.069
Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 1/90 (1%)
Frame = +2
Query: 119 VWHPTNCKLKINHW-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTSTP*TTMI 295
+W P I GH +N + SPDG A+ D LWD +
Sbjct: 372 LWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHV 431
Query: 296 SSLPCASHPTDTGYVLLSDLPSRSGIWKAR 385
+++ + TD+ ++ S + +W R
Sbjct: 432 AAVYQCAWSTDSRLLVSSSQDTTLKVWDVR 461
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 36.3 bits (80), Expect = 0.004
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +1
Query: 271 LHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPP 450
LH + + A+ FSPN + + G I++W + E P ++++ T D
Sbjct: 90 LHYFNFKSPVGAIEFSPNGKFFAVSLGKLIQVWRTPNSLEEREFAPFVLHREYTGHFD-- 147
Query: 451 QCLSLAWSTDGQ 486
+S++WS D +
Sbjct: 148 DIVSISWSADSR 159
Score = 32.7 bits (71), Expect = 0.052
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRM-MANTSTP*TTMISSLPCASHPTDTGY 337
GH G +++++ + GSL ASG D +WD + P L A HP D
Sbjct: 465 GHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPSDVLSLAFHP-DGKE 523
Query: 338 VLLSDLPSRSGIWKARRWLKSS 403
V ++ L + W + ++S
Sbjct: 524 VCVASLDGQLTFWNVQEGKQTS 545
Score = 29.1 bits (62), Expect = 0.64
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 98 LGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
LGQ L W + LK H L+T+ S DG +G D K +WD
Sbjct: 318 LGQLLVWEWQSESYVLK--QQSHYDALSTLQYSSDGQRIITGADDGKIKVWD 367
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 35.5 bits (78), Expect = 0.007
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 122 WHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
W P + ++ GH+ + +V VSP+G A+G D++A +W
Sbjct: 539 WSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIW 581
Score = 35.1 bits (77), Expect = 0.010
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
GH ++ +VTVSPDG SG KD W
Sbjct: 510 GHKDFILSVTVSPDGKWIISGSKDRTIQFW 539
Score = 33.1 bits (72), Expect = 0.040
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = +2
Query: 71 PTPIIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
P + G + R+W + ++ H GH + +V SPDG SG D LW
Sbjct: 427 PDGQFIAAGSLDKVIRIWTSSGTLVEQLH-GHEESVYSVAFSPDGKYLVSGSLDNTIKLW 485
Query: 251 DRMMANTSTP 280
+ + P
Sbjct: 486 ELQCVSNVAP 495
Score = 30.7 bits (66), Expect = 0.21
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +1
Query: 271 LHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPP 450
LHTL+H +I + FS + +L + ++++E+ +++ L+ E + +
Sbjct: 281 LHTLEHTSVICYVRFSADGKFLATGCNRAAMVFNVETGKLITLLQEE-----SSKREGDL 335
Query: 451 QCLSLAWSTDGQTLFAG 501
S+A+S DG+ L G
Sbjct: 336 YVRSVAFSPDGKYLATG 352
Score = 30.7 bits (66), Expect = 0.21
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 173 YLNTVTVSPDGSLCASGGKDMKAMLWD 253
Y+ +V SPDG A+G +D + +WD
Sbjct: 336 YVRSVAFSPDGKYLATGVEDQQIRIWD 362
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/53 (26%), Positives = 21/53 (39%)
Frame = +2
Query: 95 GLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
G+ R+W ++ GH + ++ S DG SG D LWD
Sbjct: 352 GVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWD 404
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 176 LNTVTVSPDGSLCASGGKDMKAMLW 250
+ TV SPDG A+G D +W
Sbjct: 420 VTTVMFSPDGQFIAAGSLDKVIRIW 444
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 35.5 bits (78), Expect = 0.007
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GHS + ++ PDGSL +SGG D +WD
Sbjct: 305 GHSEGIFSIACQPDGSLVSSGGNDAIGRIWD 335
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 116 RVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
++W+P NC L + GH ++V G S G D LW
Sbjct: 418 KLWNPLNCSLIKSMVGHEE--KVMSVDGYGDRFISSGYDRTIKLW 460
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 34.3 bits (75), Expect = 0.017
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH+G +NT+ S DG SG D + ++WD
Sbjct: 43 GHTGCVNTLDWSADGEFLLSGSDDTRLIVWD 73
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 33.9 bits (74), Expect = 0.023
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 146 KINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
K + GH+ ++ +V VSPD SG KD WD
Sbjct: 531 KATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWD 566
Score = 31.9 bits (69), Expect = 0.091
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
GH + +V SPDG ASG D++A +W
Sbjct: 578 GHKNSVISVCFSPDGRQFASGSGDLRARIW 607
Score = 31.1 bits (67), Expect = 0.16
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 173 YLNTVTVSPDGSLCASGGKDMKAMLWD 253
Y+ T+ SPDG +G +D + LWD
Sbjct: 362 YVRTIAFSPDGKYLVTGTEDRQIKLWD 388
Score = 29.9 bits (64), Expect = 0.37
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = +2
Query: 65 IMPTPIIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAM 244
I P + G + RVW + ++ GH + ++ SPD S+ SG D
Sbjct: 451 ISPNDQFIAVGSLDQIIRVWSVSGTLVERLE-GHKESVYSIAFSPDSSILLSGSLDKTIK 509
Query: 245 LWD 253
+W+
Sbjct: 510 VWE 512
Score = 29.5 bits (63), Expect = 0.49
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +1
Query: 271 LHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPP 450
+HTL+H ++ + FS N +L + ++D+++ + + L E DP
Sbjct: 307 VHTLEHPSVVCCVKFSNNGKYLATGCNQAANVFDVQTGKKLFTLHEE--------SPDPS 358
Query: 451 QCL---SLAWSTDGQTLFAG 501
+ L ++A+S DG+ L G
Sbjct: 359 RDLYVRTIAFSPDGKYLVTG 378
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 116 RVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
++W + K++ GH + ++ S +G SG D A LWD
Sbjct: 385 KLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWD 430
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 33.5 bits (73), Expect = 0.030
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 IIVPCGLGQNLSRVWHPTNCKLKI--NHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
++V CG GQ++ VW+P + + N+ H + +SPDG A D + +WD
Sbjct: 73 VVVSCGFGQDVY-VWNPETNEFRDLGNNAQHPSECWSSCISPDGQTIAFTSVDGRIAVWD 131
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH+ ++ V +P G L S + K +WD
Sbjct: 227 GHAAWIFAVAFNPVGDLLLSADVEGKIKIWD 257
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 33.1 bits (72), Expect = 0.040
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +2
Query: 83 IVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
++ G + R+W + + GHS + +T P GS SG +D +W+
Sbjct: 161 VLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWN 217
Score = 31.1 bits (67), Expect = 0.16
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2
Query: 65 IMPTPIIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGS--LCASGGKDMK 238
I PT ++ G + L +VW + + GH G ++ + + + ASG D +
Sbjct: 111 IDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSR 170
Query: 239 AMLWD 253
LWD
Sbjct: 171 VRLWD 175
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH+ + T+ S DG A+G KD LW+
Sbjct: 362 GHTDIVLTLDSSEDGVWLATGAKDNTVRLWN 392
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
H + T+T+ P +L A+GG + +WD
Sbjct: 102 HETPVITMTIDPTNTLLATGGAEGLVKVWD 131
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 32.7 bits (71), Expect = 0.052
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH G + +VT++P C S G D K +W+
Sbjct: 615 GHVGRVYSVTINPSRQQCISAGTDAKIRIWN 645
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 253 SNDGKHLHTL-DHNDIITALCFSPNRYW-LCAAFGPSIKIWDLESKEMVEEL 402
++ G LH L H + ++ +P+R + A I+IW+LES E+++ L
Sbjct: 604 ASTGVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLESGELLQTL 655
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 116 RVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
R+W+ + +L GHS ++ VT + + + AS D +WD
Sbjct: 642 RIWNLESGELLQTLHGHSNLVSQVTFNQNILVSASAPPDTSLRVWD 687
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 32.7 bits (71), Expect = 0.052
Identities = 20/92 (21%), Positives = 33/92 (35%)
Frame = +2
Query: 113 SRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTSTP*TTM 292
+R+W + + GH+G + V P G A+ D A LW
Sbjct: 403 ARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGH 462
Query: 293 ISSLPCASHPTDTGYVLLSDLPSRSGIWKARR 388
+S + C + ++ YVL +W R
Sbjct: 463 LSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHR 494
Score = 31.1 bits (67), Expect = 0.16
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTSTP 280
GH G + +++ S + ++ SGG D WD N + P
Sbjct: 545 GHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFKTNYNNP 584
Score = 27.5 bits (58), Expect = 2.0
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = +2
Query: 71 PTPIIVPCGLGQNLSRVW--HPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAM 244
P V G R+W H + N GH+ + V ++PDG AS +
Sbjct: 473 PNSAYVLTGSSDKTCRLWDVHRGHSVRVFN--GHTQPVTAVAIAPDGHTMASADSEGLIH 530
Query: 245 LWD 253
LWD
Sbjct: 531 LWD 533
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +2
Query: 128 PTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTSTP*TTMI 295
P+ C +H ++ +N SPD ++ A G ++ LW S P +T +
Sbjct: 313 PSVCMYTFHHTNNN--MNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSV 366
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
HSG + T SPD S +D A LW
Sbjct: 378 HSGPVYGTTFSPDNKYLLSCSEDASARLW 406
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 32.7 bits (71), Expect = 0.052
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +2
Query: 164 HSGYLNTVTVSP-DGSLCASGGKDMKAMLWDRMMANTSTP*TTMISSLPCASHPTDTGYV 340
H + +V+++P +LCASGG D +WD T S+ D Y+
Sbjct: 60 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDGTYI 119
Query: 341 LLSDLPSRSGIWKA 382
+ S+ +WK+
Sbjct: 120 ATGGMDSQVRLWKS 133
Score = 31.9 bits (69), Expect = 0.091
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 95 GLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
G G +L +W T + GH + + S DG+ A+GG D + LW
Sbjct: 80 GGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDGTYIATGGMDSQVRLW 131
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +2
Query: 116 RVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
R W + +L + GH + + ++PDG +G D + +++D
Sbjct: 351 RKWDVRSGQLLGEYTGHQEPILCMAITPDGKRVVTGSDDTELLVFD 396
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 32.3 bits (70), Expect = 0.069
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 116 RVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
R+W + + + GHS + +V P+ ++C SG D +WD
Sbjct: 530 RIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWD 575
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 31.5 bits (68), Expect = 0.12
Identities = 20/91 (21%), Positives = 33/91 (36%)
Frame = +2
Query: 113 SRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTSTP*TTM 292
+R+W + + GH+ + V SP G A+ D A LWD A
Sbjct: 427 TRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGH 486
Query: 293 ISSLPCASHPTDTGYVLLSDLPSRSGIWKAR 385
+ + C S + Y+ + +W R
Sbjct: 487 QNDVDCVSFHPNAAYLATGSSDHTTRMWDVR 517
Score = 29.1 bits (62), Expect = 0.64
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +2
Query: 116 RVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMAN 268
+VW + ++ HS + +++ S D + SGG D WD N
Sbjct: 554 KVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFWDLTYRN 604
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 31.5 bits (68), Expect = 0.12
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 116 RVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
++WH + K +I GH+G +N+V + D L SG D +W
Sbjct: 376 KLWHFSGGK-RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIW 419
Score = 29.1 bits (62), Expect = 0.64
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 271 LHTLD-HNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEEL 402
LHT H + +L + +R + C+ G +IK WD+E K+ V L
Sbjct: 427 LHTFSAHIGPVQSLALADSRLFSCSLDG-TIKQWDIEKKKCVHTL 470
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 31.5 bits (68), Expect = 0.12
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKD 232
GH G +NT+ V P G+ ASGG+D
Sbjct: 286 GHFGPINTIAVHPKGTGYASGGED 309
Score = 29.9 bits (64), Expect = 0.37
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 119 VWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
VW N + + GH+G + T ++ +L SG D LWD
Sbjct: 36 VWFSHNGERLGTYEGHTGAIWTCDINKSSTLMVSGAADNTMRLWD 80
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 31.5 bits (68), Expect = 0.12
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 277 TLDHNDI-ITALCFSPNRYWLCAAFGPSIKIWDLESKEMV 393
T+ H D + LC SP++ +L AA P ++++D+ + +
Sbjct: 35 TIQHADSQVNRLCISPDKKFLAAAGNPHVRLYDINTSSQM 74
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 31.5 bits (68), Expect = 0.12
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +2
Query: 92 CGLGQNLSRVWH--PTNCKLKINHWG----HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
CG G + R+W + K+ + H+ +N V +P+G++ A+ G + MLW
Sbjct: 37 CG-GDSKIRIWQLITSESSTKVEYLSTLSRHTQAVNVVRFNPEGNILATAGDEGTIMLW- 94
Query: 254 RMMANTSTP*TTM 292
T+TP TT+
Sbjct: 95 ---VPTNTPITTL 104
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 30.7 bits (66), Expect = 0.21
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 176 LNTVTVSPDGSLCASGGKDMKAMLWD 253
+ T+TVS D SL SG KD ++WD
Sbjct: 299 ITTLTVSFDASLLISGDKDGNVLVWD 324
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 30.7 bits (66), Expect = 0.21
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 158 WGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
+GH+ + P GS ASGG D + +LW+
Sbjct: 47 FGHTAEVLVARFDPSGSYFASGGMDRQILLWN 78
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 30.7 bits (66), Expect = 0.21
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 IMPTP-IIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKA 241
+ PT +I+ NL+ + +P++CK+ +GH + T+SPD + + D
Sbjct: 281 VWPTKDLIIVVNSKGNLTYL-NPSDCKVIDTIYGHQRSITAATLSPDATHFYTASYDGTV 339
Query: 242 MLWD 253
+ WD
Sbjct: 340 LSWD 343
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 30.7 bits (66), Expect = 0.21
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 256 NDGKHLHTLD-HNDIITALCFSPNRYWLCAAFGPSIK--IWDL 375
N + LHTL+ H DI+T + FSP+ + A+ + +WDL
Sbjct: 313 NLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDL 355
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 30.3 bits (65), Expect = 0.28
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
HS + T + P+G++ A+GG+D A +WD
Sbjct: 299 HSDSVLTGSWHPNGNILATGGQDTTAKVWD 328
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 30.3 bits (65), Expect = 0.28
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +2
Query: 95 GLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
G G ++W + LK+ GH + + VSP S G+D WD
Sbjct: 181 GAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWD 233
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = +2
Query: 98 LGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
L + + WH +++ GH G++ V V P +G D +WD
Sbjct: 141 LAEQIRPEWHAPWTLMRVIS-GHLGWVRCVDVEPGNQWFCTGAGDRTIKIWD 191
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +1
Query: 319 PNRYWLCAAFGP-SIKIWDLES 381
P W C G +IKIWDL S
Sbjct: 173 PGNQWFCTGAGDRTIKIWDLAS 194
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +2
Query: 77 PIIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
P + CG + + W K+ ++ GH + + + P + + G+D A +WD
Sbjct: 218 PYLFSCG-EDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWD 275
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 30.3 bits (65), Expect = 0.28
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 116 RVW--HPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
+VW H + +LK+ GH + TV P L ASG KD WD
Sbjct: 189 KVWNFHMSTEELKLT--GHGWDVKTVDWHPSKGLLASGSKDNLVKFWD 234
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 29.9 bits (64), Expect = 0.37
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 299 MISLWSKVWRCLPSFDPTTSPSCPYHQMHTKS 204
M+S+W +V RCL S+ + S PY H KS
Sbjct: 429 MVSIWGRVVRCLKSY--SQKQSNPYPFWHAKS 458
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 29.9 bits (64), Expect = 0.37
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDR 256
H+G + +V SP+G ASG D ++W +
Sbjct: 73 HTGTVTSVRFSPNGQYLASGSDDRVVIIWHK 103
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMAN 268
GH + ++ + PDGS A+GG D +W N
Sbjct: 16 GHRLSIFSIHIHPDGSRIATGGLDGTIRIWSTEAIN 51
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 29.5 bits (63), Expect = 0.49
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Frame = +2
Query: 155 HWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMA--NTSTP*TTMISSLPCASHPT- 325
H H G + + VSPD C + G +W+ N TP T L + +
Sbjct: 211 HVDHQGEIWAMCVSPDAKRCLTAGTGSDVKVWEISFPDDNNFTPTTKAFQQLGTFTRQSR 270
Query: 326 DTGYVLLSDLPSRSGIWKAR-RWLKSSGLKS 415
D L D+ +R +++A R L+ L+S
Sbjct: 271 DRPITLAYDVSNRYVVFQAHDRLLEVFRLRS 301
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +2
Query: 95 GLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
G R+W + +N GH + T+ G+ ASG D ++WD
Sbjct: 82 GYADGSIRLWKDGELLITLN--GHKSAVTTMDFDKMGTRLASGSMDTDIIVWD 132
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = +2
Query: 65 IMPTPIIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAM 244
I P V L N +V++ + K +N +GH + ++ +S D L + D
Sbjct: 542 ISPDGRFVAASLLDNTVKVYYLDSLKFFLNLYGHKLPVLSMDISYDSKLLVTCSADKNVK 601
Query: 245 LW 250
+W
Sbjct: 602 IW 603
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 29.5 bits (63), Expect = 0.49
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
H+G + V SP+G AS G+D +WD
Sbjct: 220 HNGVVLCVNYSPNGVFLASCGRDKTIRIWD 249
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 29.5 bits (63), Expect = 0.49
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 265 KHLHTLDHNDIITALCFSP--NRYWLCAAFGPSIKIWDL 375
K L HN+I+T + F P +RY++ + I++W +
Sbjct: 287 KSLAVFRHNEIVTCVAFHPIDDRYFVSGSLDCKIQLWSI 325
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 29.5 bits (63), Expect = 0.49
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 119 VWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
VW + K + GH ++++ ++ DG++ A+G D LW
Sbjct: 258 VWDSISSKTITSLTGHENRISSLALTSDGTMLATGSWDECVRLW 301
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 28.7 bits (61), Expect = 0.85
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = +2
Query: 77 PIIVPCGLGQNLSRVWH--PTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
P I+ C Q + R+W+ NC + GHS Y+ P L S D +W
Sbjct: 108 PWILSCSDDQTI-RIWNWQSRNCIAILT--GHSHYVMCAAFHPSEDLIVSASLDQTVRVW 164
Query: 251 D 253
D
Sbjct: 165 D 165
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH G + + P L SGG D K +W+
Sbjct: 51 GHDGPVRGIAFHPTQPLFVSGGDDYKVNVWN 81
Score = 25.8 bits (54), Expect = 6.0
Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 1/103 (0%)
Frame = +2
Query: 71 PTPIIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
PT + G VW+ + KL + GH Y+ T + S D +W
Sbjct: 63 PTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIW 122
Query: 251 DRMMANTSTP*TTMISSLPCAS-HPTDTGYVLLSDLPSRSGIW 376
+ N T + CA+ HP++ ++ + L +W
Sbjct: 123 NWQSRNCIAILTGHSHYVMCAAFHPSE-DLIVSASLDQTVRVW 164
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 28.7 bits (61), Expect = 0.85
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Frame = +2
Query: 134 NCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD----RMMANTSTP*TTMISS 301
N K + SGY V SPDG SG A WD ++MA + + S
Sbjct: 475 NKKKVFKGYSCSGYSLEVGFSPDGRFVFSGDSSGNACFWDWKTCKLMAKLPAH-SGPVQS 533
Query: 302 LPCASHPTDTGYVLLSDL 355
+ A HP +T V S +
Sbjct: 534 M--AFHPQETSKVATSSI 549
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 28.7 bits (61), Expect = 0.85
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +1
Query: 229 GHEG---DVVGSNDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIW 369
GHEG D+ S+DG++L ++ + + + + + FG S ++W
Sbjct: 192 GHEGACFDLKFSSDGRYLCSVSEDRTLRLWSIESSPFLIATGFGHSARVW 241
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 298 ITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEII 417
+T+L N +LC A GP ++I+D+ +L I+
Sbjct: 19 VTSLALIHNDKFLCCAQGPCLRIYDVSESRHESDLIKSIL 58
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 28.7 bits (61), Expect = 0.85
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 116 RVWHPTNCKLKINHWGHSGYLNTVTVSP-DGSLCASGGKDMKAMLW 250
R+WH + KL GH +N V +P D AS G D +W
Sbjct: 453 RIWHRESGKLLATLSGHVKCVNYVAYNPVDPYQFASAGDDNTVRIW 498
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/57 (24%), Positives = 24/57 (42%)
Frame = +2
Query: 80 IIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
I+ G +N +W + K N H+ + +++SPDG +G D W
Sbjct: 350 IVTTHGFAKNQVSLWKYPSLKNIANLTAHTNRVLYLSMSPDGQSIVTGAGDETLRFW 406
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRM 259
GH G + ++V G+ ASGG D +W+ M
Sbjct: 377 GHKGRVRCLSVHVSGNWLASGGDDGVLRIWEVM 409
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 298 ITALCFSPNRYWL-CAAFGPSIKIWDLE 378
I+ LCFS +L AF ++K+WD+E
Sbjct: 302 ISDLCFSKGNLFLYTGAFDNAVKVWDME 329
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 176 LNTVTVSPDGSLCASGGKDMKAMLWD 253
+N T+S G L S G D + +WD
Sbjct: 491 INHATISNSGILVTSSGTDNQTFVWD 516
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMAN 268
GH+ + + SP+G+ AS D LW ++ +N
Sbjct: 465 GHTNTVWALAFSPNGNTLASADNDGNVFLWIKISSN 500
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDR 256
H G + T++ D +LC++GG D K +++ R
Sbjct: 530 HKGAVYTISWMNDATLCSAGG-DGKIVVYQR 559
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 280 LDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVE 396
L HND + +LC P + C+ G IK+W + + + E
Sbjct: 173 LAHNDCVRSLCQIPGGFASCSNDG-VIKLWTSDGEFLYE 210
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = +2
Query: 119 VWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
+W P++ + H G + + V+ DG + G D +WD
Sbjct: 249 LWSPSSTTPLVKMLTHRGPVRDLAVNRDGRYMVTAGADSLLKVWD 293
>SPCC16C4.08c |skb15||Shk1 kinase binding protein
15|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 244 VVGSNDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPE 411
V+ ++DGK LH + + + Y + A+ S+ IWD + ++E PE
Sbjct: 223 VLDTSDGKILHEFTAHKKRVKSVYPVDDYLITASSDGSVCIWDKDWNLVIEHNIPE 278
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 176 LNTVTVSPDGSLCASGGKD 232
L VT SPDG A GGKD
Sbjct: 367 LTCVTWSPDGKFIAIGGKD 385
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GHS + + DG ASGG D +WD
Sbjct: 302 GHSSEVCGLAWRSDGLQLASGGNDNVVQIWD 332
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH + +T + G+L SG D +WD
Sbjct: 99 GHEHNIPCITFNSSGTLLLSGSIDRSLQIWD 129
>SPCP31B10.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 287
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 258 IRSHNIAFMSLPPDAHKEPSGD 193
++S +A+ SLP DAH E S D
Sbjct: 254 MQSRPVAYTSLPADAHFEDSDD 275
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 337 CAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFA 498
C+A ++K+WDL + V L + TSK D ++ S DG+ ++A
Sbjct: 307 CSA-NSALKLWDLRTVHTVRPLPAATTPELTTSKRD-FGVTNVCTSPDGERIYA 358
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 292 DIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQ 423
D I CFS + A + + D E+KE+V E+ INQ
Sbjct: 371 DPIIVFCFSKKECEINAHQFGKLDLNDTENKELVTEIFDSAINQ 414
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 277 TLDHNDIITALCFSPNRYWLCAAFGPSIKIWDL 375
+ H + I + + + +A GPSIK+WDL
Sbjct: 203 SFSHGEAIDVVLPMQSGSTVISAGGPSIKVWDL 235
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 25.8 bits (54), Expect = 6.0
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 104 QNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMAN 268
Q SR P K+K H G ++ ++ S DG+ S G+D +WD +N
Sbjct: 279 QKGSRTKRPV-MKIKDAHLPQQG-ISCLSFSQDGNYLLSRGEDNALRVWDLRNSN 331
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.8 bits (54), Expect = 6.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 316 SPNRYWLCAAFGPSIKIWDLE 378
+P Y F P I+IWDL+
Sbjct: 200 APGNYVAVGTFDPEIEIWDLD 220
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 25.8 bits (54), Expect = 6.0
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTSTP*TTMISSLPCASHPTDTGYV 340
GH+G + + S D S+ S G+D WD + T + L C TD V
Sbjct: 267 GHTGPVMDIVFSDDPSVAYSVGQDHTIKTWDLITGQNVDSKITK-APLLCVEKLTDLHLV 325
Query: 341 L 343
+
Sbjct: 326 I 326
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 146 KINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
+I HW H+ LN ++ + +G SGG++ +LW
Sbjct: 256 QILHW-HANPLNGLSWALNGEYLLSGGQEGVLVLW 289
>SPCC1393.04 |fta4|sma6|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 233
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -3
Query: 659 QHRQELEQVEKSLKESIIQGMSKEHKN 579
Q R ELEQ+EK L E G S H N
Sbjct: 149 QERSELEQIEKML-EPFEDGPSSIHTN 174
>SPBC409.08 |||spermine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 539
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 334 LCAAFGPSIKIWDLESKEMVEELRPEIIN 420
+C+AFG S+ DLE ++ PE+ N
Sbjct: 112 VCSAFGSSVIAGDLEDVSRDLKVGPEVAN 140
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Frame = +2
Query: 83 IVPCGLGQNLSRVWHP--TNCKLKINHWGHSGYLNTVTVSP--DGSLCASGGKDMKAMLW 250
++ C + ++W P N H+ Y+ V++ L ASGG D + ++W
Sbjct: 94 VISCSSDSTV-KLWKPHVLNASCLSTIGEHTDYVKRVSIPKYSKSPLVASGGLDKRIIVW 152
Query: 251 D 253
D
Sbjct: 153 D 153
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +2
Query: 119 VWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
VW + + +GHSG + + +L SG D ++WD
Sbjct: 245 VWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWD 289
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 25.4 bits (53), Expect = 7.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 445 PPQCLSLAWSTDGQTLFAG 501
PP +S WS DG ++ G
Sbjct: 397 PPWAMSACWSPDGNNIYIG 415
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 25.4 bits (53), Expect = 7.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 289 CGLRCGGVCHHSIPQH 242
CG+ C G C H IP +
Sbjct: 514 CGITCHGQCAHLIPDY 529
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH+ Y+ + + + L SG D ++WD
Sbjct: 130 GHTDYVKCLLLLEEEGLLLSGSTDASLIVWD 160
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,199,448
Number of Sequences: 5004
Number of extensions: 70018
Number of successful extensions: 351
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 347
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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