Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31045
(703 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 96 2e-20
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 93 2e-19
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 91 9e-19
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 40 0.002
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 39 0.003
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 39 0.003
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 38 0.006
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 38 0.006
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 38 0.006
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 37 0.015
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 37 0.015
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 37 0.015
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 36 0.020
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 36 0.034
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 36 0.034
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 35 0.045
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 35 0.045
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 34 0.079
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 34 0.079
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 34 0.079
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 34 0.10
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 33 0.18
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 33 0.24
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 33 0.24
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 33 0.24
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 33 0.24
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 33 0.24
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 32 0.32
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 32 0.32
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 32 0.32
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 32 0.32
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 32 0.42
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 32 0.42
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 32 0.42
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 32 0.42
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 32 0.42
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 32 0.42
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 32 0.42
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 32 0.42
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 32 0.42
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 32 0.42
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 32 0.42
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 31 0.56
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 31 0.56
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 31 0.74
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 31 0.74
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 31 0.74
At5g13850.1 68418.m01619 nascent polypeptide-associated complex ... 31 0.98
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 31 0.98
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 31 0.98
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 31 0.98
At3g12390.1 68416.m01544 nascent polypeptide associated complex ... 31 0.98
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 30 1.3
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 30 1.3
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 30 1.7
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 30 1.7
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 30 1.7
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 30 1.7
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 30 1.7
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 30 1.7
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 30 1.7
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 30 1.7
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 29 2.3
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 29 2.3
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 29 2.3
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 29 2.3
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 29 2.3
At1g69350.1 68414.m07958 pentatricopeptide (PPR) repeat-containi... 29 2.3
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 29 2.3
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 29 3.0
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 29 3.0
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 29 3.0
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 29 3.0
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 29 3.0
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 29 3.9
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 29 3.9
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 29 3.9
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 29 3.9
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 29 3.9
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 29 3.9
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 28 5.2
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 28 5.2
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 28 5.2
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 28 5.2
At3g02600.1 68416.m00251 phosphatidic acid phosphatase family pr... 28 5.2
At1g78770.1 68414.m09180 cell division cycle family protein simi... 28 5.2
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 28 5.2
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 28 5.2
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 28 5.2
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 28 6.9
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 28 6.9
At4g10480.1 68417.m01720 nascent polypeptide associated complex ... 28 6.9
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 28 6.9
At3g49470.1 68416.m05407 nascent polypeptide-associated complex ... 28 6.9
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 28 6.9
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 28 6.9
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 28 6.9
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 28 6.9
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 28 6.9
At1g33040.1 68414.m04068 nascent polypeptide-associated complex ... 28 6.9
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 28 6.9
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 27 9.1
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 27 9.1
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 27 9.1
At5g03800.1 68418.m00347 exostosin family protein / pentatricope... 27 9.1
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 27 9.1
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 27 9.1
At4g26020.1 68417.m03747 expressed protein weak similarity to ca... 27 9.1
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 27 9.1
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 27 9.1
At3g53360.1 68416.m05889 pentatricopeptide (PPR) repeat-containi... 27 9.1
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 27 9.1
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/91 (49%), Positives = 60/91 (65%), Gaps = 8/91 (8%)
Frame = +1
Query: 259 DGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSK 438
+GK L++L+ N +I ALCFSPNRYWLCAA IKIWDLESK +VE+L+ ++ + + +
Sbjct: 225 EGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKAD 284
Query: 439 TDPP--------QCLSLAWSTDGQTLFAGYS 507
P C SL WS DG TLF+GY+
Sbjct: 285 NSGPAATKRKVIYCTSLNWSADGSTLFSGYT 315
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/66 (51%), Positives = 45/66 (68%)
Frame = +2
Query: 56 FTPIMPTPIIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDM 235
F+P P IV + + +VW+ +NCKL+ GH+GY++TV VSPDGSLCASGGKD
Sbjct: 158 FSPNTLQPTIVSASWDKTV-KVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDG 216
Query: 236 KAMLWD 253
+LWD
Sbjct: 217 VVLLWD 222
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTST 277
GHS ++ V +S DG SG D + LWD + A ST
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWD-LAAGVST 98
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 8/91 (8%)
Frame = +1
Query: 259 DGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQT-- 432
+GK L++L+ II +LCFSPNRYWLCAA SI+IWDLESK +VE+L+ ++ + +
Sbjct: 224 EGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDLKAEAEKTD 283
Query: 433 ------SKTDPPQCLSLAWSTDGQTLFAGYS 507
+KT C SL WS DG TLF+GY+
Sbjct: 284 GSTGIGNKTKVIYCTSLNWSADGNTLFSGYT 314
Score = 77.0 bits (181), Expect = 1e-14
Identities = 37/66 (56%), Positives = 44/66 (66%)
Frame = +2
Query: 56 FTPIMPTPIIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDM 235
F+P P IV + + +VW+ NCKL+ GHSGYLNTV VSPDGSLCASGGKD
Sbjct: 157 FSPNTLVPTIVSASWDKTV-KVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDG 215
Query: 236 KAMLWD 253
+LWD
Sbjct: 216 VILLWD 221
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GHS ++ V +S DG SG D + LWD
Sbjct: 61 GHSHFVQDVVLSSDGQFALSGSWDGELRLWD 91
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 90.6 bits (215), Expect = 9e-19
Identities = 44/91 (48%), Positives = 63/91 (69%), Gaps = 8/91 (8%)
Frame = +1
Query: 259 DGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSK 438
+GK L++L+ II +LCFSPNRYWLCAA SI+IWDLESK +VE+L+ ++ ++ + ++
Sbjct: 224 EGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDLKSEAEKNE 283
Query: 439 ----TDPPQ----CLSLAWSTDGQTLFAGYS 507
T + C SL WS DG TLF+GY+
Sbjct: 284 GGVGTGNQKKVIYCTSLNWSADGSTLFSGYT 314
Score = 77.4 bits (182), Expect = 9e-15
Identities = 37/66 (56%), Positives = 45/66 (68%)
Frame = +2
Query: 56 FTPIMPTPIIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDM 235
F+P P IV + + +VW+ NCKL+ + GHSGYLNTV VSPDGSLCASGGKD
Sbjct: 157 FSPNTLVPTIVSASWDKTV-KVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDG 215
Query: 236 KAMLWD 253
+LWD
Sbjct: 216 VILLWD 221
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTS 274
GHS ++ V +S DG SG D + LWD T+
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETT 98
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = +2
Query: 92 CGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANT 271
CGL +L+RVW + + GH + +V SP+G ASGG+D + +WD M +
Sbjct: 399 CGL-DSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKS 457
Query: 272 STP*TTMISSLPCASHPTDTGYVL-LSDLPSRSGIWKAR 385
+ + + GY L + + IW R
Sbjct: 458 LYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGR 496
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 116 RVWH-PTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
R+W T +L + GHS + + DG+L AS G D A +WD
Sbjct: 364 RLWDINTGAELLLQE-GHSRSVYGIAFQQDGALAASCGLDSLARVWD 409
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/98 (28%), Positives = 39/98 (39%)
Frame = +2
Query: 98 LGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTST 277
LGQ L W LK GH +N VT SPD L A+G D K +W+ M
Sbjct: 328 LGQLLVWDWRTETYILK--QQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFI 385
Query: 278 P*TTMISSLPCASHPTDTGYVLLSDLPSRSGIWKARRW 391
T +++ D +L + L W +R+
Sbjct: 386 TFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRY 423
Score = 35.9 bits (79), Expect = 0.026
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +1
Query: 271 LHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPP 450
LH + D + AL FSPN ++ G ++IW S + P + +T
Sbjct: 87 LHRITFKDKVGALKFSPNGKFIAVGIGKLVEIW--RSPGFRRAVLP--FERVRTFANSDD 142
Query: 451 QCLSLAWSTDGQTLFAG 501
+ +SL WS D L G
Sbjct: 143 KVVSLEWSLDSDYLLVG 159
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/98 (28%), Positives = 39/98 (39%)
Frame = +2
Query: 98 LGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTST 277
LGQ L W LK GH +N VT SPD L A+G D K +W+ M
Sbjct: 368 LGQLLVWDWRTETYILK--QQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFI 425
Query: 278 P*TTMISSLPCASHPTDTGYVLLSDLPSRSGIWKARRW 391
T +++ D +L + L W +R+
Sbjct: 426 TFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRY 463
Score = 35.9 bits (79), Expect = 0.026
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +1
Query: 271 LHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPP 450
LH + D + AL FSPN ++ G ++IW S + P + +T
Sbjct: 87 LHRITFKDKVGALKFSPNGKFIAVGIGKLVEIW--RSPGFRRAVLP--FERVRTFANSDD 142
Query: 451 QCLSLAWSTDGQTLFAG 501
+ +SL WS D L G
Sbjct: 143 KVVSLEWSLDSDYLLVG 159
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 83 IVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
+V G R+W ++N H G + + + GS+ ASG KD +LWD
Sbjct: 78 LVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWD 134
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/62 (22%), Positives = 29/62 (46%)
Frame = +2
Query: 65 IMPTPIIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAM 244
I P + L + +V++ + K ++ +GH + + +S DG L +G +D
Sbjct: 548 ISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLK 607
Query: 245 LW 250
+W
Sbjct: 608 IW 609
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +2
Query: 65 IMPTPIIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAM 244
+ P +V G +W PT+ + H G +++V P+G L A+ GK+ K
Sbjct: 247 VNPYNSVVGLGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIK 306
Query: 245 LWD 253
+WD
Sbjct: 307 IWD 309
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 101 GQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
G + + W + K+K+ GHS YL+TV S +G +D A +WD
Sbjct: 179 GDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWD 229
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 116 RVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
++W KLK + GH+ + V SPDG SGGKD LW
Sbjct: 427 KIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 34.7 bits (76), Expect = 0.060
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
Frame = +2
Query: 119 VWHPTNCKL-KINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTSTP*TTMI 295
+W P+ K K GH +N V SPDG AS D LW+ + T +
Sbjct: 343 LWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHV 402
Query: 296 SSLPCASHPTDTGYVLLSDLPSRSGIWKAR 385
+ S D+ +L S IW+ R
Sbjct: 403 GPVYQVSWSADSRLLLSGSKDSTLKIWEIR 432
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH+ + V+ SPDG ASG D LWD
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWD 137
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +2
Query: 95 GLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
G G R+W GH ++ TV SPDG SG K + W+
Sbjct: 127 GSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWN 179
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 116 RVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
R+W+ + GH G + V+ S D L SG KD +W+
Sbjct: 385 RLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWE 430
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTSTP 280
GH + ++ +SPDG ASG +D M+WD A TP
Sbjct: 539 GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITP 578
Score = 30.7 bits (66), Expect = 0.98
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH+ + +++ S +GSL ASG D LWD
Sbjct: 581 GHNSCVWSLSYSGEGSLLASGSADCTVKLWD 611
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
H+G LN ++S DGSL A G D +WD
Sbjct: 352 HNG-LNCSSISHDGSLVAGGFSDSSIKVWD 380
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD-RMMAN 268
GHSG + + T SP G S D LW ++ AN
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNAN 452
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +2
Query: 107 NLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMM 262
+L+RVW + + GH + +V SP+G ASGG+D + +WD M
Sbjct: 152 SLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRM 203
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 36.3 bits (80), Expect = 0.020
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +1
Query: 262 GKHLHTLD-HNDIITALCFSPNRYWLCAAFGP-SIKIWDLESKEMVEELRPEIINQTQTS 435
GK LH H I +L F P + L ++K WDLE+ E++ RPE
Sbjct: 123 GKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATG----- 177
Query: 436 KTDPPQCLSLAWSTDGQTLFAG 501
++A+ DGQTLF G
Sbjct: 178 ------VRAIAFHPDGQTLFCG 193
Score = 34.3 bits (75), Expect = 0.079
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 116 RVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
RVW + GH+ ++T+ SPDG SGG D +WD
Sbjct: 74 RVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWD 119
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = +2
Query: 80 IIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
++V G + ++W K+ GH + V P G ASG D +WD
Sbjct: 20 VLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWD 77
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 83 IVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDR-- 256
+V GL N+ +VW T KL H G + ++ P L A+G D WD
Sbjct: 106 VVSGGL-DNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLET 164
Query: 257 -MMANTSTP*TTMISSLPCASHP 322
+ T+ P T + ++ A HP
Sbjct: 165 FELIGTTRPEATGVRAI--AFHP 185
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 35.5 bits (78), Expect = 0.034
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMAN 268
H G +NTV+ + DG + SG D + +LWD A+
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWDWQTAS 88
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 35.5 bits (78), Expect = 0.034
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMAN 268
H G +NTV+ + +G + SG D + +LWD + N
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGN 92
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 35.1 bits (77), Expect = 0.045
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMM 262
GH+ ++ +V SPDG A+G D LWD M
Sbjct: 241 GHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKM 274
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 35.1 bits (77), Expect = 0.045
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 286 HNDIITALCFSP--NRYWLCAAFGPSIKIWDLESKEMVE 396
HND +T + FSP Y+L + I+IW ++ + +VE
Sbjct: 545 HNDYVTCIQFSPVDENYFLSGSLDAKIRIWSIQDRHVVE 583
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 232 HEGDVVGSNDGKHLHTLD-HNDIITALCFSPNRYWLCAAFGPSIKIWDLESK 384
H + V S K + +L H D I L +S ++ L ++ ++++WD+E+K
Sbjct: 486 HVPETVFSFSDKPVCSLKGHLDAILDLSWSKSQLLLSSSMDKTVRLWDIETK 537
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 34.3 bits (75), Expect = 0.079
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +2
Query: 74 TPIIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
T ++ G + + RVW P + GH+ + + + G C SG D LWD
Sbjct: 224 TGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWD 283
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 34.3 bits (75), Expect = 0.079
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +2
Query: 74 TPIIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
T ++ G + + RVW P + GH+ + + + G C SG D LWD
Sbjct: 224 TGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWD 283
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 34.3 bits (75), Expect = 0.079
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 262 GKHLHTLD-HNDIITALCFSPNRYWLCAAFGP-SIKIWDLESKEMVEELRPEIINQTQTS 435
GK LH H I +L F P + L ++K WDLE+ E++ RPE
Sbjct: 174 GKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATG----- 228
Query: 436 KTDPPQCLSLAWSTDGQTLFAG 501
S+ + DG+TLF G
Sbjct: 229 ------VRSIKFHPDGRTLFCG 244
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = +2
Query: 80 IIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
++V G + ++W K+ GH + V P G ASG D +WD
Sbjct: 71 VLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWD 128
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GHS ++T+ +PDG SGG D +WD
Sbjct: 140 GHSRGISTIRFTPDGRWVVSGGLDNVVKVWD 170
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 83 IVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
+V GL N+ +VW T KL H G + ++ P L A+G D WD
Sbjct: 157 VVSGGL-DNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWD 212
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 146 KINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
KIN GH G + T+ SPDG A+GG+D +W
Sbjct: 193 KIN--GHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 116 RVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
+VW + + GH + +++SPDGS + G D K +WD
Sbjct: 205 KVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWD 250
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
GH + T+ +P G+L ASG D + LW
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLW 80
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = +2
Query: 86 VPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
V G N+ +VW T KL H G + ++ P L A+G D WD
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD 213
Score = 31.1 bits (67), Expect = 0.74
Identities = 15/58 (25%), Positives = 22/58 (37%)
Frame = +2
Query: 80 IIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
++V G ++W K+ GH +V P G ASG D +WD
Sbjct: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
Score = 31.1 bits (67), Expect = 0.74
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH+ +N + +PDG SGG+D +WD
Sbjct: 141 GHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD 171
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 286 HNDIITALCFSPNRYWLCAAFGP-SIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLS 462
H I +L F P+ + L ++K WDLE+ E++ PE T +CLS
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPE---------TAGVRCLS 234
Query: 463 LAWSTDGQTLFAG 501
++ DG+T+ G
Sbjct: 235 --FNPDGKTVLCG 245
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = +2
Query: 86 VPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
V G N+ +VW T KL H G + ++ P L A+G D WD
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD 213
Score = 31.1 bits (67), Expect = 0.74
Identities = 15/58 (25%), Positives = 22/58 (37%)
Frame = +2
Query: 80 IIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
++V G ++W K+ GH +V P G ASG D +WD
Sbjct: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
Score = 31.1 bits (67), Expect = 0.74
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH+ +N + +PDG SGG+D +WD
Sbjct: 141 GHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD 171
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 286 HNDIITALCFSPNRYWLCAAFGP-SIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLS 462
H I +L F P+ + L ++K WDLE+ E++ PE T +CLS
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPE---------TAGVRCLS 234
Query: 463 LAWSTDGQTLFAG 501
++ DG+T+ G
Sbjct: 235 --FNPDGKTVLCG 245
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 116 RVWHPTNCKLKINHW-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
RVW K I W GH G + + G L A+ G D K ++WD
Sbjct: 85 RVWDLETLKC-IRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWD 130
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 86 VPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
+ C G ++ V T+ +K G S L + +SPD L S G + +WD
Sbjct: 34 IACACGDVINIV-DSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWD 88
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 128 PTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
P N K + H +N+V V+ + SL +G +D A +W
Sbjct: 486 PINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIW 526
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDR 256
H G L + SPD ++ ASG + +A++WDR
Sbjct: 355 HRGALTVIRYSPDLTMFASGDANREAVVWDR 385
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 140 KLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
K +H HS ++N + SPDG+ + D K M++D
Sbjct: 42 KFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYD 79
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 286 HNDIITALCFSPNRYWLCAAFGPSIKIWDL 375
HN IT++ FS N Y+L A +++WDL
Sbjct: 395 HNGEITSISFSENGYFLATAALDGVRLWDL 424
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 83 IVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
IV CG L + K K++ HS ++N V +PDGS + D K +++D
Sbjct: 160 IVTCG-EDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYD 215
Score = 31.1 bits (67), Expect = 0.74
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDRM 259
H G ++ + SPD S+ AS + +A++WDR+
Sbjct: 490 HRGAISVIRYSPDLSMFASADLNREAVVWDRV 521
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH G + V+ SPDG + D A +WD
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWD 260
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 32.3 bits (70), Expect = 0.32
Identities = 10/44 (22%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 271 LHTLDHNDIITALCFSP--NRYWLCAAFGPSIKIWDLESKEMVE 396
L H+D +T + F+P +RY++ + +++W + +++V+
Sbjct: 547 LKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPDRQVVD 590
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 271 LHTLDHNDIITALCFSP--NRYWLCAAFGPSIKIWDLESKEMVE 396
L T HN+ +T + F+P + Y++ + ++IWD+ +V+
Sbjct: 356 LRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTRCRVVD 399
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
H G + + SPDG AS G+D +W
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVW 245
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 271 LHTLDHNDIITALCFSP--NRYWLCAAFGPSIKIWDLESKEMVE 396
L T HN+ +T + F+P + Y++ + ++IWD+ +V+
Sbjct: 356 LRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTRCRVVD 399
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
H G + + SPDG AS G+D +W
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVW 245
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 116 RVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
R+W ++ + GH G + +T S DG++ S G D LW+
Sbjct: 82 RLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWN 127
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 31.9 bits (69), Expect = 0.42
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 95 GLGQNLSRVW-HPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
G QN VW +PT KL GHS + + VSPDG +G D W+
Sbjct: 398 GYSQNQIIVWKYPTMSKLA-TLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWN 450
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 286 HNDIITALCFSPNRYW-LCAAFGPSIKIWDLESKEMVEELRPEI 414
H D IT LCFS + W + ++ S++IWD+ + ++ + ++
Sbjct: 556 HTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGVHVDV 599
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 119 VWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
VW N + + GHSG + +S D S +G D A LWD
Sbjct: 63 VWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWD 107
Score = 30.7 bits (66), Expect = 0.98
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKD 232
GH G +N + SPDG +SGG+D
Sbjct: 315 GHFGPINALAFSPDGKSFSSGGED 338
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 286 HNDIITALCFSPNRYWLCAAFGPSIKIWDL 375
H +TA+ FS N Y+L A +++WDL
Sbjct: 394 HTGEVTAISFSENGYFLATAAEDGVRLWDL 423
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 286 HNDIITALCFSPNRYWLCAAFGPSIKIWDL 375
H +TA+ FS N Y+L A +++WDL
Sbjct: 394 HTGEVTAISFSENGYFLATAAEDGVRLWDL 423
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 256 NDGKHLHTLD-HNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEEL 402
N+ K ++ H+ + ++C+SPN + + ++K+W L S + + EL
Sbjct: 663 NNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHEL 712
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 256 NDGKHLHTLD-HNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEEL 402
N+ K ++ H+ + ++C+SPN + + ++K+W L S + + EL
Sbjct: 665 NNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHEL 714
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 256 NDGKHLHTLD-HNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEEL 402
N+ K ++ H+ + ++C+SPN + + ++K+W L S + + EL
Sbjct: 665 NNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHEL 714
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 256 NDGKHLHTLD-HNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEEL 402
N+ K ++ H+ + ++C+SPN + + ++K+W L S + + EL
Sbjct: 665 NNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHEL 714
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 256 NDGKHLHTLD-HNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEEL 402
N+ K ++ H+ + ++C+SPN + + ++K+W L S + + EL
Sbjct: 665 NNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHEL 714
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH G +N V P GSL AS D A +W+
Sbjct: 446 GHQGEVNCVKWDPTGSLLASCSDDSTAKIWN 476
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 113 SRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
S+ H N ++I GH+ + SP SL ASG D A +W
Sbjct: 248 SQTSHIPNSDVRILE-GHTSEVCACAWSPSASLLASGSGDATARIW 292
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH+ +N + +PDG SGG+D +WD
Sbjct: 234 GHTRGVNVLRFTPDGRWIVSGGEDNVVKVWD 264
Score = 30.7 bits (66), Expect = 0.98
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 107 NLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
N+ +VW T KL H G + ++ P L A+G D WD
Sbjct: 258 NVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWD 306
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/57 (26%), Positives = 21/57 (36%)
Frame = +2
Query: 83 IVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
+V G ++W K+ GH +V P G ASG D +WD
Sbjct: 166 LVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWD 222
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 262 GKHLHTL-DHNDIITALCFSPNRYWLCAAFGP-SIKIWDLESKEMV 393
GK LH H I +L F P+ + L ++K WDLE+ E++
Sbjct: 268 GKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELI 313
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 31.1 bits (67), Expect = 0.74
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 250 GSNDGKHLHTLDHNDIITALCFSPNRYWLCA-AFG-PSIKIWDLESKEMVE--ELRPEII 417
G + K L H D + LC+ P L A A G S+++WD S + + EL E I
Sbjct: 53 GHSKAKDLELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENI 112
Query: 418 NQT 426
N T
Sbjct: 113 NIT 115
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 31.1 bits (67), Expect = 0.74
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH G +N V + G + SG D + MLW+
Sbjct: 53 GHEGCVNAVEFNSTGDVLVSGSDDRQIMLWN 83
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 31.1 bits (67), Expect = 0.74
Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 5/105 (4%)
Frame = +2
Query: 95 GLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW---DRMMA 265
G L ++W + GH G + + VS + +L AS D +W D M
Sbjct: 323 GSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPI 382
Query: 266 NTSTP*TTMISSLPCASHPTDTGYVLLSDLPSRSGIWKAR--RWL 394
+ T ++++ + +L S IW AR +WL
Sbjct: 383 SVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWL 427
>At5g13850.1 68418.m01619 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 159
Score = 30.7 bits (66), Expect = 0.98
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 279 GVEVFAIIRSHNIAFMSLPPDAHKEPSGDTVTVF 178
GV + +S NI F+ PD K P+ DT +F
Sbjct: 76 GVSRVTVKKSKNILFVISKPDVFKSPASDTYVIF 109
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH + +V P SL SGGKD LWD
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWD 296
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH G +N + + +GSL SG D++ +W+
Sbjct: 48 GHQGCVNALAWNSNGSLLISGSDDLRINIWN 78
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 30.7 bits (66), Expect = 0.98
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 119 VWHPTNCKLKINHWGHSGYLNTVTVSPDG-SLCASGGKDMKAMLW 250
+WH + KL + GH+G +N V+ SP + AS D +W
Sbjct: 515 IWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
>At3g12390.1 68416.m01544 nascent polypeptide associated complex
alpha chain protein, putative / alpha-NAC, putative
similar to alpha-NAC, non-muscle form [Mus musculus]
GI:1666690; contains Pfam profiles PF01849: NAC domain,
PF00627: UBA/TS-N domain
Length = 203
Score = 30.7 bits (66), Expect = 0.98
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 279 GVEVFAIIRSHNIAFMSLPPDAHKEPSGDTVTVF 178
GV + +S NI F+ PD K P+ DT +F
Sbjct: 80 GVSRVTVKKSKNILFVISKPDVFKSPASDTYVIF 113
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 125 HPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
+P +C L+ GH+G + +++ G ASG D +W+
Sbjct: 411 YPNSCYLEYK--GHTGAVTSISTDSSGEWIASGSTDGSVRMWE 451
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +2
Query: 35 GCQGARFFTPIMPTPI-IVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSL 211
G +G + PT +V G G + + +W N GH ++ + S DG L
Sbjct: 68 GHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQL 127
Query: 212 CASGGKDMKAMLWD 253
ASGG D ++D
Sbjct: 128 LASGGLDGVVQIFD 141
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 95 GLGQNLSRVW-HPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
G QN VW +PT K+ GH+ + + VSPDG +G D W+
Sbjct: 441 GYSQNQIIVWKYPTMSKIA-TLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWN 493
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 286 HNDIITALCFSPN-RYWLCAAFGPSIKIWDLESKEMVEE 399
H +T LCFSPN + A+ SI++W++ + ++E
Sbjct: 288 HKSAVTWLCFSPNSEQIITASKDGSIRVWNINVRYHLDE 326
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/98 (24%), Positives = 34/98 (34%), Gaps = 1/98 (1%)
Frame = +2
Query: 95 GLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTS 274
G ++W LK+ GH G + + VS + S G D + WD
Sbjct: 188 GSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVI 247
Query: 275 TP*TTMISSLPC-ASHPTDTGYVLLSDLPSRSGIWKAR 385
+ + C A HPT VL S +W R
Sbjct: 248 RSYHGHLHGVYCLALHPT-LDVVLTGGRDSVCRVWDIR 284
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 119 VWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
+W N + + GH+G + VS D S +G D A LWD
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 119 VWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
+W N + + GH+G + VS D S +G D A LWD
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKD 232
GH G +N + +PDG +SGG+D
Sbjct: 288 GHFGPINALAFNPDGKSFSSGGED 311
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 119 VWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
+W N + + GH+G + VS D S +G D A LWD
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKD 232
GH G +N + +PDG +SGG+D
Sbjct: 288 GHFGPINALAFNPDGKSFSSGGED 311
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = +2
Query: 83 IVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMM 262
I+ G N ++ K +GH + + +SPD + +G +D +LW
Sbjct: 2640 IITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHK 2699
Query: 263 ANTS 274
A TS
Sbjct: 2700 AFTS 2703
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 155 HWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
HW HS +N + S DG+ SGG++ ++W
Sbjct: 280 HW-HSAEVNVLNFSSDGAYLYSGGREGVLVVW 310
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 176 LNTVTVSPDGS-LCASGGKDMKAMLWDRMMANTSTP 280
LNTV V + S L A+GG D +WD TS P
Sbjct: 315 LNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAP 350
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 176 LNTVTVSPDGS-LCASGGKDMKAMLWDRMMANTSTP 280
LNTV V + S L A+GG D +WD TS P
Sbjct: 315 LNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAP 350
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 95 GLGQNLSRVWHPTNCKLKINHW-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
G + +R+W + + GH G +NTV PDG +G D L+D
Sbjct: 223 GSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYD 276
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 95 GLGQNLSRVWHPTNCKLKINHW-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
G + +R+W + + GH G +NTV PDG +G D L+D
Sbjct: 161 GSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYD 214
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 95 GLGQNLSRVWHPTNCKLKINHW-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
G + +R+W + + GH G +NTV PDG +G D L+D
Sbjct: 223 GSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYD 276
>At1g69350.1 68414.m07958 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535: PPR repeat
Length = 787
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +2
Query: 326 DTGY-VLLSDLPSRSGIWKARRWLKSSGLKSLTKRKLPRQTLLSV 457
DTGY LLS++ + G W+ R L+S+ +KS +K+P + + +
Sbjct: 705 DTGYYTLLSNIYAEEGEWEEFRRLRSA-MKSSNLKKVPGYSAIEI 748
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMM 262
H +N + +S DG + SG D ++W+R++
Sbjct: 277 HLSAVNALAISEDGKVLYSGACDRSILVWERLI 309
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTS 274
GH+ + + S G ASGG D +WDR +A+++
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSN 271
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 95 GLGQNLSRVW-HPTNCKL-KINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
G QN +W +P+ K+ ++N GH+ + + SPDG AS D LW+
Sbjct: 348 GFTQNQLTLWKYPSMVKMAELN--GHTSRVLFMAQSPDGCTVASAAGDETLRLWN 400
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
H G + T+ SPD L AS G+D +W+
Sbjct: 410 HQGGIWTMKFSPDSHLLASAGEDCAIHVWE 439
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 194 SPDGSLCASGGKDMKAMLWDRMMANTSTP*TTM 292
S DG + AS G D KA+LW +T P TT+
Sbjct: 660 SSDGKMLASAGHDKKAVLW---YTDTMKPKTTL 689
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 38 CQGARF----FTPIMPTPIIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDG 205
C G +F F P P+ +++ C Q+L +W+ + K + H G + ++ VS
Sbjct: 860 CNGNKFQSCVFHPAYPSLLVIGCY--QSLE-LWNMSENKT-MTLPAHEGLITSLAVSTAT 915
Query: 206 SLCASGGKDMKAMLW 250
L AS D LW
Sbjct: 916 GLVASASHDKLVKLW 930
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 29.1 bits (62), Expect = 3.0
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Frame = +2
Query: 116 RVWH---PTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTSTP*T 286
R+W P C LK+ GH+ ++ V +P +L SG D +W+ +
Sbjct: 110 RIWDARSPYEC-LKVLR-GHTNFVFCVNFNPPSNLIVSGSFDETIRIWE--VKTGKCVRM 165
Query: 287 TMISSLPCAS-HPTDTGYVLLSDLPSRS-GIWKARRWLKSSGLKSLTKRKLPRQTLLSVS 460
S+P +S H G +++S S IW A+ + + LK+L K P + S
Sbjct: 166 IKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK---EGTCLKTLIDDKSPAVSFAKFS 222
Query: 461 P 463
P
Sbjct: 223 P 223
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +2
Query: 119 VWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
+W TN L + GHS ++ + S D S D +WD
Sbjct: 69 LWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWD 113
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +2
Query: 71 PTPIIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
P+ +IV + + R+W K HS +++V + DGSL S D +W
Sbjct: 139 PSNLIVSGSFDETI-RIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW 197
Query: 251 D 253
D
Sbjct: 198 D 198
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
GH+ ++ V S DG+L AS D +LW
Sbjct: 41 GHTAAISCVKFSNDGNLLASASVDKTMILW 70
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 292 DIITALCFSPNRYWLCA-AFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLA 468
D I++L FSP L A ++ ++ W++ + I ++ + S + L A
Sbjct: 27 DSISSLSFSPKADILVATSWDCQVRCWEITRSD------GSIASEPKVSMSHDQPVLCSA 80
Query: 469 WSTDGQTLFAG 501
W DG T+F G
Sbjct: 81 WKDDGTTVFTG 91
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +2
Query: 92 CGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
CG G W + ++ GH G +N V + S+ S G D +WD
Sbjct: 78 CG-GDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 95 GLGQNLSRVW-HPTNCKL-KINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
G QN +W +P+ K+ ++N GH+ + + SPDG AS D LW+
Sbjct: 331 GFTQNQLTLWKYPSMVKMAELN--GHTSRVLFMAQSPDGCTVASAAGDETLRLWN 383
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTST 277
GH+ + + S G ASGG D +WDR +A++++
Sbjct: 264 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNS 302
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTST 277
GH+ + + S G ASGG D +WDR +A++++
Sbjct: 254 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNS 292
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +2
Query: 116 RVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
++W+ KL+ GH ++ S DG + DM A LW
Sbjct: 236 KIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLW 280
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDR 256
H +N + ++ DGS+ SG D ++W+R
Sbjct: 279 HKSAVNALALNDDGSVLFSGSCDRSILVWER 309
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 3/100 (3%)
Frame = +2
Query: 95 GLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW---DRMMA 265
G L +VW + GH G + + VS + AS D +W D +
Sbjct: 263 GSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPV 322
Query: 266 NTSTP*TTMISSLPCASHPTDTGYVLLSDLPSRSGIWKAR 385
+ T ++++ + P +L S IW AR
Sbjct: 323 SVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDAR 362
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANT 271
GH+ + + S G+ ASGG D +WDR +A++
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASS 286
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 292 DIITALCFSP--NRYWLCAAFGPSIKIWDLESKEMVEELR 405
+ ++A+ FS +RY G +KIWDL+ K +++L+
Sbjct: 93 ECLSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLK 132
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +2
Query: 206 SLCASGGKDMKAMLWDRMMANTSTP*TTMISSLPCASHPTDTGYVLLSDLPSRSGIWKAR 385
++ ASG +D K +WD + + T VLLS R+ + K
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDG 287
Query: 386 RWLKSSGLKSLTKRKLPR 439
R +SGLK T+ K+ +
Sbjct: 288 RDPSNSGLKWSTEAKVEK 305
>At3g02600.1 68416.m00251 phosphatidic acid phosphatase family
protein / PAP2 family protein similar to phosphatidic
acid phosphatase [Mus musculus] GI:1487873; contains
Pfam profile: PF01569 phosphatase PAP2 superfamily
Length = 364
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 483 TNLICWLLSNTIRVWQVSISAR*A*LSTLISFIFVFF 593
T+L L SNT+ +W V + A L L+ FIF++F
Sbjct: 105 TDLSYPLKSNTVPIWSVPVYAM---LLPLVIFIFIYF 138
>At1g78770.1 68414.m09180 cell division cycle family protein similar
to cell division cycle protein GI:603230 from [Homo
sapiens]; contains Pfam profile PF00515 TPR Domain
148977 (apparently not full-length).
Length = 543
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +1
Query: 283 DHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLS 462
+ + ++++L FSP WL + + IK +D KE EL+ + + + ++
Sbjct: 180 EESSLLSSLQFSPEDGWLSSFYSCLIKKYD---KESTVELKFKKLENETSGSVSGSSMIT 236
Query: 463 LAWSTD 480
LA +TD
Sbjct: 237 LANNTD 242
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMAN 268
GH G ++ V +P G ASG +D +W AN
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTTPAN 303
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMAN 268
GH G ++ V +P G ASG +D +W AN
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTTPAN 303
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +2
Query: 161 GH--SGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH +GY V SPDG SG + K WD
Sbjct: 498 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 530
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 164 HSGYLNTVTVS-PDGSLCASGGKDMKAMLWDR 256
H+ +N + +S +GSL SGG D ++W+R
Sbjct: 258 HNSGINALALSGTNGSLLHSGGSDGSILVWER 289
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 149 INHW-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTSTP 280
I+ W H GY+ T V+P+ L S D +WD + T P
Sbjct: 447 ISSWRAHDGYV-TKLVAPESHLLVSSSLDKTLRIWDLRKSWTPQP 490
>At4g10480.1 68417.m01720 nascent polypeptide associated complex
alpha chain protein, putative / alpha-NAC, putative
similar to alpha-NAC, non-muscle form [Mus musculus]
GI:1666690; contains Pfam profiles PF01849: NAC domain,
PF00627: UBA/TS-N domain
Length = 212
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 261 IIRSHNIAFMSLPPDAHKEPSGDTVTVF 178
I RS N+ F+ PD K P+ +T +F
Sbjct: 91 IKRSKNVLFVISKPDVFKSPNSETYVIF 118
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +2
Query: 71 PTPIIVPCGLGQNLSRVWHPTNCK-LKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAML 247
P ++ G R+W T K LK+ HS + V + DGSL S D +
Sbjct: 123 PQSNMIVSGSFDETVRIWDVTTGKCLKVLP-AHSDPVTAVDFNRDGSLIVSSSYDGLCRI 181
Query: 248 WD 253
WD
Sbjct: 182 WD 183
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH+ Y V +P ++ SG D +WD
Sbjct: 111 GHTNYAFCVNFNPQSNMIVSGSFDETVRIWD 141
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 95 GLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
G N +W + KL GH+ + V P +L ASG D +W
Sbjct: 261 GSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>At3g49470.1 68416.m05407 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 217
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 279 GVEVFAIIRSHNIAFMSLPPDAHKEPSGDTVTVF 178
GV I R+ N+ F PD K P +T +F
Sbjct: 90 GVSRVTIKRTKNVLFFISKPDVFKSPHSETYVIF 123
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 271 LHTLD-HNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVE 396
L TL H D + L P+ +L A+ SI++W L + ++E
Sbjct: 183 LQTLSGHTDTVRGLAVMPDLGFLSASHDGSIRLWALSGEVLLE 225
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 271 LHTLD-HNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVE 396
L TL H D + L P+ +L A+ SI++W L + ++E
Sbjct: 183 LQTLSGHTDTVRGLAVMPDLGFLSASHDGSIRLWALSGEVLLE 225
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 271 LHTLD-HNDIITALCFSP-NRYWLCAAFGPSIKIWDLESKEMVEEL 402
LH L HN I SP N+Y A+ ++KIW+L+ ++ + L
Sbjct: 210 LHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVL 255
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH Y + P+G + A+G +D LWD
Sbjct: 317 GHLDYSFSSAWHPNGQILATGNQDTTCRLWD 347
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH+ Y+N + DGS + D +WD
Sbjct: 345 GHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
>At1g33040.1 68414.m04068 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 209
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 261 IIRSHNIAFMSLPPDAHKEPSGDTVTVF 178
I R+ N+ F+ PD +K P+ +T +F
Sbjct: 88 IKRAKNVLFVISKPDVYKSPNAETYVIF 115
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 265 KHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLES 381
K +HTL+ +T+ S + ++ A G S+K WD ++
Sbjct: 174 KIVHTLETKSPVTSAEVSQDGRYITTADGSSVKFWDAKN 212
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
H +NT+ SP G L ASG + +W
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIW 91
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
H +NT+ SP G L ASG + +W
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIW 91
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/58 (25%), Positives = 22/58 (37%)
Frame = +2
Query: 80 IIVPCGLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
I+ G QN +W + GHS + + SPDG +G D W+
Sbjct: 399 IVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWN 456
>At5g03800.1 68418.m00347 exostosin family protein /
pentatricopeptide (PPR) repeat-containing protein
contains Pfam profiles: PF03016 exostosin family,
PF01535 PPR repeat
Length = 1388
Score = 27.5 bits (58), Expect = 9.1
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Frame = +2
Query: 149 INHWG----HSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTSTP*TTMISSLPCAS 316
+ HWG +N++ V P+ S+ ++A+L D +++T ++ L ++
Sbjct: 670 LGHWGLLEEAEDTINSMPVQPEVSV-------LRALL-DSCRIHSNTSVAKRVAKLILST 721
Query: 317 HP-TDTGYVLLSDLPSRSGIWKARRWLKSSGLKSLTKRKLPRQT 445
P T + Y+L S++ S SG W ++ ++ RK P ++
Sbjct: 722 KPETPSEYILKSNIYSASGFWHRSEMIREE-MRERGYRKHPAKS 764
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH + +V+ + GSL A+ G+D +W+
Sbjct: 90 GHESEVKSVSWNASGSLLATCGRDKSVWIWE 120
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 164 HSGYLNTVTVSPDGSLCASGGKDMKAMLW 250
H N V+ SPD L AS +D LW
Sbjct: 349 HRATCNAVSYSPDCELMASASEDATVALW 377
>At4g26020.1 68417.m03747 expressed protein weak similarity to
cardiac muscle factor 1 [Gallus gallus] GI:14422164
Length = 247
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -3
Query: 701 KIYTISFIFILNIIQHRQELEQVEKSLKESIIQGMSKEHKNK 576
K+YT S + ++HR + +++ LK + SKEH+++
Sbjct: 63 KLYTESLNNFADQLEHRTKCHSLKEELKRVNDENKSKEHEHR 104
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 27.5 bits (58), Expect = 9.1
Identities = 23/98 (23%), Positives = 34/98 (34%), Gaps = 1/98 (1%)
Frame = +2
Query: 95 GLGQNLSRVWHPTNCKLKINHWGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTS 274
G ++W LK+ GH + + VS + S G D + WD
Sbjct: 194 GSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVI 253
Query: 275 TP*TTMISSLPC-ASHPTDTGYVLLSDLPSRSGIWKAR 385
+S + C A HPT +L S +W R
Sbjct: 254 RSYHGHLSGVYCLALHPT-LDVLLTGGRDSVCRVWDIR 290
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/69 (23%), Positives = 29/69 (42%)
Frame = +2
Query: 170 GYLNTVTVSPDGSLCASGGKDMKAMLWDRMMANTSTP*TTMISSLPCASHPTDTGYVLLS 349
G +N++ S DG+ A+ G+D ++D + + +L C S D Y+L
Sbjct: 304 GSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTG 363
Query: 350 DLPSRSGIW 376
+W
Sbjct: 364 GEDDLVQVW 372
>At3g53360.1 68416.m05889 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 768
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 329 TGYVLLSDLPSRSGIWKARRWLKSSGLKSLTKRKLPRQTLLSV 457
T +VLL + + SG W+ L+SS +K +K+P Q+ + +
Sbjct: 677 TAHVLLCSMHASSGNWENAALLRSS-MKKHDVKKIPGQSWIEI 718
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 161 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 253
GH Y P+G + A+G +D LWD
Sbjct: 288 GHKDYSFASAWHPNGLILATGNQDTACRLWD 318
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,229,834
Number of Sequences: 28952
Number of extensions: 390514
Number of successful extensions: 1471
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1459
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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