Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31042
(720 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif prote... 31 3.1
BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif prote... 31 3.1
AL109827-26|CAO72113.1| 134|Homo sapiens RNA binding motif prot... 31 3.1
AL109827-25|CAO72112.1| 143|Homo sapiens RNA binding motif prot... 31 3.1
AL109827-24|CAI20134.1| 291|Homo sapiens RNA binding motif prot... 31 3.1
AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif prot... 31 3.1
AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif prote... 31 3.1
AF393214-1|AAM73682.1| 932|Homo sapiens swan protein. 31 3.1
AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein. 31 3.1
AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein. 31 3.1
AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein. 31 3.1
BC038860-1|AAH38860.1| 627|Homo sapiens ProSAPiP1 protein protein. 31 4.1
AL121891-6|CAC09910.1| 673|Homo sapiens ProSAPiP1 protein protein. 31 4.1
AL121891-5|CAM27675.1| 627|Homo sapiens ProSAPiP1 protein protein. 31 4.1
AB011124-1|BAA25478.2| 709|Homo sapiens KIAA0552 protein protein. 31 4.1
AC022517-1|AAF31271.1| 819|Homo sapiens KIAA0876 protein protein. 30 7.3
AB020683-1|BAA74899.2| 1119|Homo sapiens KIAA0876 protein protein. 30 7.3
>BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 31.5 bits (68), Expect = 3.1
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 478 SKTEVQATVAEFQRR-KNLWLRIPEGLAD*AGPPSQHGEEDRLWLPTVESD 627
SKTE+Q + +RR + L IP A +GPP G R+ LPT S+
Sbjct: 75 SKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNLPTTVSN 125
>BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 31.5 bits (68), Expect = 3.1
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 478 SKTEVQATVAEFQRR-KNLWLRIPEGLAD*AGPPSQHGEEDRLWLPTVESD 627
SKTE+Q + +RR + L IP A +GPP G R+ LPT S+
Sbjct: 75 SKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNLPTTVSN 125
>AL109827-26|CAO72113.1| 134|Homo sapiens RNA binding motif protein
12 protein.
Length = 134
Score = 31.5 bits (68), Expect = 3.1
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 478 SKTEVQATVAEFQRR-KNLWLRIPEGLAD*AGPPSQHGEEDRLWLPTVESD 627
SKTE+Q + +RR + L IP A +GPP G R+ LPT S+
Sbjct: 75 SKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNLPTTVSN 125
>AL109827-25|CAO72112.1| 143|Homo sapiens RNA binding motif protein
12 protein.
Length = 143
Score = 31.5 bits (68), Expect = 3.1
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 478 SKTEVQATVAEFQRR-KNLWLRIPEGLAD*AGPPSQHGEEDRLWLPTVESD 627
SKTE+Q + +RR + L IP A +GPP G R+ LPT S+
Sbjct: 75 SKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNLPTTVSN 125
>AL109827-24|CAI20134.1| 291|Homo sapiens RNA binding motif protein
12 protein.
Length = 291
Score = 31.5 bits (68), Expect = 3.1
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 478 SKTEVQATVAEFQRR-KNLWLRIPEGLAD*AGPPSQHGEEDRLWLPTVESD 627
SKTE+Q + +RR + L IP A +GPP G R+ LPT S+
Sbjct: 75 SKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNLPTTVSN 125
>AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 31.5 bits (68), Expect = 3.1
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 478 SKTEVQATVAEFQRR-KNLWLRIPEGLAD*AGPPSQHGEEDRLWLPTVESD 627
SKTE+Q + +RR + L IP A +GPP G R+ LPT S+
Sbjct: 75 SKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNLPTTVSN 125
>AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 31.5 bits (68), Expect = 3.1
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 478 SKTEVQATVAEFQRR-KNLWLRIPEGLAD*AGPPSQHGEEDRLWLPTVESD 627
SKTE+Q + +RR + L IP A +GPP G R+ LPT S+
Sbjct: 75 SKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNLPTTVSN 125
>AF393214-1|AAM73682.1| 932|Homo sapiens swan protein.
Length = 932
Score = 31.5 bits (68), Expect = 3.1
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 478 SKTEVQATVAEFQRR-KNLWLRIPEGLAD*AGPPSQHGEEDRLWLPTVESD 627
SKTE+Q + +RR + L IP A +GPP G R+ LPT S+
Sbjct: 75 SKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNLPTTVSN 125
>AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 31.5 bits (68), Expect = 3.1
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 478 SKTEVQATVAEFQRR-KNLWLRIPEGLAD*AGPPSQHGEEDRLWLPTVESD 627
SKTE+Q + +RR + L IP A +GPP G R+ LPT S+
Sbjct: 75 SKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNLPTTVSN 125
>AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 31.5 bits (68), Expect = 3.1
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 478 SKTEVQATVAEFQRR-KNLWLRIPEGLAD*AGPPSQHGEEDRLWLPTVESD 627
SKTE+Q + +RR + L IP A +GPP G R+ LPT S+
Sbjct: 75 SKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNLPTTVSN 125
>AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein.
Length = 952
Score = 31.5 bits (68), Expect = 3.1
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 478 SKTEVQATVAEFQRR-KNLWLRIPEGLAD*AGPPSQHGEEDRLWLPTVESD 627
SKTE+Q + +RR + L IP A +GPP G R+ LPT S+
Sbjct: 95 SKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNLPTTVSN 145
>BC038860-1|AAH38860.1| 627|Homo sapiens ProSAPiP1 protein protein.
Length = 627
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 427 AKSADIKVEEPAAQPEDSKTEVQATVAEFQRRKNLWLRIPE-GLAD*AGPPS-QHGEEDR 600
A+ + +EE E K + V +QR + L R+ E G A A P+ QHGEE +
Sbjct: 553 AEERRVWLEEKEKVIEYQKQLQLSYVEMYQRNQQLERRLRERGAAGGASTPTPQHGEEKK 612
Query: 601 LWLPT 615
W P+
Sbjct: 613 AWTPS 617
>AL121891-6|CAC09910.1| 673|Homo sapiens ProSAPiP1 protein protein.
Length = 673
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 427 AKSADIKVEEPAAQPEDSKTEVQATVAEFQRRKNLWLRIPE-GLAD*AGPPS-QHGEEDR 600
A+ + +EE E K + V +QR + L R+ E G A A P+ QHGEE +
Sbjct: 599 AEERRVWLEEKEKVIEYQKQLQLSYVEMYQRNQQLERRLRERGAAGGASTPTPQHGEEKK 658
Query: 601 LWLPT 615
W P+
Sbjct: 659 AWTPS 663
>AL121891-5|CAM27675.1| 627|Homo sapiens ProSAPiP1 protein protein.
Length = 627
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 427 AKSADIKVEEPAAQPEDSKTEVQATVAEFQRRKNLWLRIPE-GLAD*AGPPS-QHGEEDR 600
A+ + +EE E K + V +QR + L R+ E G A A P+ QHGEE +
Sbjct: 553 AEERRVWLEEKEKVIEYQKQLQLSYVEMYQRNQQLERRLRERGAAGGASTPTPQHGEEKK 612
Query: 601 LWLPT 615
W P+
Sbjct: 613 AWTPS 617
>AB011124-1|BAA25478.2| 709|Homo sapiens KIAA0552 protein protein.
Length = 709
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 427 AKSADIKVEEPAAQPEDSKTEVQATVAEFQRRKNLWLRIPE-GLAD*AGPPS-QHGEEDR 600
A+ + +EE E K + V +QR + L R+ E G A A P+ QHGEE +
Sbjct: 635 AEERRVWLEEKEKVIEYQKQLQLSYVEMYQRNQQLERRLRERGAAGGASTPTPQHGEEKK 694
Query: 601 LWLPT 615
W P+
Sbjct: 695 AWTPS 699
>AC022517-1|AAF31271.1| 819|Homo sapiens KIAA0876 protein protein.
Length = 819
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 454 EPAAQPEDSKTEVQATVAEFQRRKNLWLRIPEGLAD*AGPPSQHGEEDRLWLPT 615
E ED + +++ T A+ +R+K + +P L PP+ E+ LWLP+
Sbjct: 156 EAEGAEEDGRGKLRPTKAKSERKKKSFGLLPPQLPP---PPAHFPSEEALWLPS 206
>AB020683-1|BAA74899.2| 1119|Homo sapiens KIAA0876 protein protein.
Length = 1119
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 454 EPAAQPEDSKTEVQATVAEFQRRKNLWLRIPEGLAD*AGPPSQHGEEDRLWLPT 615
E ED + +++ T A+ +R+K + +P L PP+ E+ LWLP+
Sbjct: 456 EAEGAEEDGRGKLRPTKAKSERKKKSFGLLPPQLPP---PPAHFPSEEALWLPS 506
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,520,411
Number of Sequences: 237096
Number of extensions: 1901452
Number of successful extensions: 4330
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4329
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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