Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31042
         (720 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g26200.1 68418.m03118 mitochondrial substrate carrier family ...    34   0.11 
At3g49990.1 68416.m05466 expressed protein                             32   0.33 
At5g22810.1 68418.m02667 GDSL-motif lipase, putative similar to ...    30   1.3  
At1g62480.1 68414.m07050 vacuolar calcium-binding protein-relate...    29   2.3  
At3g01290.1 68416.m00037 band 7 family protein similar to hypers...    29   3.1  
At5g56730.1 68418.m07080 peptidase M16 family protein / insulina...    29   4.1  
At2g45800.1 68415.m05696 LIM domain-containing protein similar t...    29   4.1  
At2g04430.1 68415.m00447 MutT/nudix family protein similar to SP...    28   5.4  
At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein ...    27   9.5  

>At5g26200.1 68418.m03118 mitochondrial substrate carrier family
           protein contains Pfam profile: PF00153 mitochondrial
           carrier protein
          Length = 342

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = -1

Query: 234 TSVGLTESSILGATSRIG*AGTTSFSSATGIAKLTAAKA 118
           T++ +T+SS+  AT R+G + TTS + A G A LT+A A
Sbjct: 108 TALEITKSSVGQATVRLGLSDTTSLAVANGAAGLTSAVA 146


>At3g49990.1 68416.m05466 expressed protein
          Length = 502

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 412 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEFQRRKN 528
           +P   A+  D+K E P A+P   KT  Q +  E + RKN
Sbjct: 422 LPGRRAEQTDVKAEIPKAEPIKRKTHGQESKEEKKERKN 460


>At5g22810.1 68418.m02667 GDSL-motif lipase, putative similar to
           EXL3 (GP:15054386) [Arabidopsis thaliana]
          Length = 337

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -1

Query: 321 IVLFGLWYSGYLVVTNWSRFGFLSSVAAATSVGLTESSILGATSRIG 181
           +V+F ++   Y + T  S FGF  +  A    GL E+SIL     +G
Sbjct: 254 LVVFDIYQPLYDLATRPSEFGFAEARRACCGTGLLETSILCNPKSVG 300


>At1g62480.1 68414.m07050 vacuolar calcium-binding protein-related
           contains weak similarity to vacuolar calcium binding
           protein [Raphanus sativus] gi|9049359|dbj|BAA99394
          Length = 152

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
 Frame = +1

Query: 253 EKAEPAPVSNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAK 432
           E+ E A V   E P + E KKD+ AP ++ +                  K  E+ + + +
Sbjct: 65  EETEEAQV---ETPEVVEIKKDEEAPVETPVV---VEDESKTEEVVEAKKEEEVEEKKTE 118

Query: 433 SADIKV-EEPAAQPEDSKTEVQATV 504
            A + V EE   + E+ K  V+A+V
Sbjct: 119 EAPVVVEEEKKPEAEEEKPAVEASV 143


>At3g01290.1 68416.m00037 band 7 family protein similar to
           hypersensitive-induced response protein [Zea mays]
           GI:7716470; contains Pfam profile PF01145: SPFH domain /
           Band 7 family
          Length = 285

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 232 FGRFNRVINFGRDF*NWLSGNYV 164
           FG+F +V+N G  F  W+ G+YV
Sbjct: 21  FGKFQKVLNPGLQFVPWVIGDYV 43


>At5g56730.1 68418.m07080 peptidase M16 family protein / insulinase
            family protein contains Pfam domain, PF05193: Peptidase
            M16 inactive domain
          Length = 956

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -1

Query: 300  YSGYLVVTNWSRFGFLSSVAAATSVG--LTESSILGATSRIG 181
            Y+  +++   SRFGFLSS+ ++ S G  + ++ IL   + +G
Sbjct: 903  YTAVILMPQRSRFGFLSSIFSSRSEGPYIRDTKILAGIAGLG 944


>At2g45800.1 68415.m05696 LIM domain-containing protein similar to
           PGPS/D1 [Petunia x hybrida] GI:4105772, LIM domain
           protein PLIM1 [Nicotiana tabacum] GI:5932418; contains
           Pfam profile PF00412: LIM domain
          Length = 226

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 283 DEVPAIPEAKKDDIAPE 333
           D+  +IPEAK+DD APE
Sbjct: 197 DDTASIPEAKEDDAAPE 213


>At2g04430.1 68415.m00447 MutT/nudix family protein similar to
           SP|P53370 Nucleoside diphosphate-linked moiety X motif 6
           {Homo sapiens}; contains Pfam profile PF00293: NUDIX
           domain
          Length = 283

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 10/77 (12%)
 Frame = +1

Query: 442 IKVEEPAAQPEDSKTEVQATVAEFQRRKNLWLRIP---EGLAD*A---GPPSQHGEED-- 597
           ++VE       DSK +V     + Q +K +W+++P     L D A   G    H E +  
Sbjct: 26  MEVESMTIGDFDSKLDVSLKAWKDQGKKGIWIKLPSELSSLVDTAIKKGFTYHHAENEYV 85

Query: 598 --RLWLPTVESDCCCNS 642
               WLP   S   CN+
Sbjct: 86  MLTFWLPEPPSTLPCNA 102


>At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein
           contains Pfam profile: PF00096 zinc finger, C2H2 type
          Length = 586

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 385 FLRFSLQERFPVSRYRSLLGLYRPFWPLV 299
           FL F   E  PV  ++ L  L RP WPL+
Sbjct: 25  FLSFPRPENTPVQLFQLLHTLERPGWPLL 53


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,487,998
Number of Sequences: 28952
Number of extensions: 279100
Number of successful extensions: 805
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)