Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31041
(544 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0430 - 3406472-3406490,3406662-3406681,3407330-3407428,340... 32 0.26
05_05_0247 + 23593921-23594556 32 0.34
08_02_0232 - 14584952-14586451 31 0.59
01_02_0119 + 11281522-11282016 30 1.4
03_01_0200 - 1589768-1590023,1591134-1591264 29 1.8
07_03_0056 - 12863599-12863715,12864107-12864235,12864322-128644... 29 2.4
04_04_0058 - 22416949-22418196 29 2.4
10_08_0550 + 18699187-18699272,18699298-18699544 29 3.2
10_01_0129 + 1535823-1537196 29 3.2
08_02_1464 - 27317282-27318037 29 3.2
04_03_0314 - 14238620-14240128 29 3.2
01_05_0507 - 22800124-22800163,22800411-22800554,22801291-228018... 29 3.2
06_03_1330 - 29375494-29376912 28 4.2
05_02_0072 - 6334613-6335215 28 4.2
11_03_0097 + 9967351-9967969,9968180-9968259 28 5.5
10_08_0247 - 16151969-16152091,16152599-16152718,16153480-161535... 28 5.5
10_01_0274 - 2901033-2901778,2902475-2902634 28 5.5
09_06_0358 - 22504716-22505588 28 5.5
07_03_1107 - 24024387-24024497,24025799-24026410 28 5.5
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 28 5.5
01_01_1046 - 8246740-8247504 28 5.5
11_04_0152 + 14153539-14154060 27 7.3
05_04_0144 + 18389877-18390431 27 7.3
04_03_0819 + 20018496-20019487,20019587-20019721,20019834-200199... 27 7.3
03_01_0265 + 2046918-2049102,2052385-2052452,2052542-2052652,205... 27 7.3
12_02_0675 + 21814048-21814368 27 9.7
12_01_0347 + 2658545-2659309 27 9.7
05_03_0662 + 16732965-16733037,16733310-16733413,16734468-167348... 27 9.7
05_01_0212 + 1601861-1603600 27 9.7
04_04_0689 - 27292271-27292709,27293717-27293856,27294572-272946... 27 9.7
03_06_0524 - 34502286-34502609,34502998-34503084,34503280-345033... 27 9.7
03_05_0358 - 23438416-23439282,23440116-23440163,23440343-234403... 27 9.7
02_01_0773 - 5760034-5760386,5760889-5760925,5761069-5761225,576... 27 9.7
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 27 9.7
>05_01_0430 -
3406472-3406490,3406662-3406681,3407330-3407428,
3407810-3407880,3407956-3408127
Length = 126
Score = 32.3 bits (70), Expect = 0.26
Identities = 23/50 (46%), Positives = 25/50 (50%)
Frame = -3
Query: 278 SEPGAPRFGLRGSPVRWRRGR*SL*SPACRPQGQAGGSVPGQGPRAPXRV 129
+EP P FG GSP R RR R S A R G GG P + P AP V
Sbjct: 9 AEPRPPGFGSSGSPCR-RRHRRRWCSWAARRMG--GGRRPQESPAAPVAV 55
>05_05_0247 + 23593921-23594556
Length = 211
Score = 31.9 bits (69), Expect = 0.34
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = +3
Query: 273 LRAQ*EEQAHHRHPAATIPLLHAELHSGRLPVIWGGVPASRGSRCVRRNRQPAGRRIAEP 452
+R + +A RH AAT LL+ G V G VP SRG+ +R N R+
Sbjct: 88 VRVRNPNRAEFRHGAATTALLYRGAEVGAAGVPAGTVP-SRGAATLRLNMTVRADRVVAA 146
Query: 453 AG 458
AG
Sbjct: 147 AG 148
>08_02_0232 - 14584952-14586451
Length = 499
Score = 31.1 bits (67), Expect = 0.59
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 133 RXGARGPCPGTEPPA*PCGRQAGDHRDHRPR 225
R GARG PG+ PP P ++A H D R R
Sbjct: 26 RVGARGRRPGSAPPPPPRPQEAHRHGDSRQR 56
>01_02_0119 + 11281522-11282016
Length = 164
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 381 VPASR-GSRCVRRNRQPAGRRIAEPAGRREARTSRPHG 491
VPASR G+R R + GR I GR++ R+ +P G
Sbjct: 80 VPASRAGARLGDREVEAIGRLIVSGGGRKKGRSKQPGG 117
>03_01_0200 - 1589768-1590023,1591134-1591264
Length = 128
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = +3
Query: 309 HPAATIPLLHAELHSGRLPVIWGGVPASRGSRCVRRNRQPAGRRIAEPAGRR 464
H A+T+PLL A RLP VP R +R V R G R+ +PA R+
Sbjct: 7 HLASTLPLLRAVRTPRRLPPAVSAVP-PRAARVVLR-----GFRLPDPAARK 52
>07_03_0056 -
12863599-12863715,12864107-12864235,12864322-12864408,
12864657-12864848,12864930-12865106,12865174-12865420,
12865510-12865619,12865751-12865851,12865937-12866000,
12866433-12866522,12866621-12866719,12866817-12866897,
12867197-12867535
Length = 610
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 325 FPSFTQNSIAEDYLLSGAESQQAEVRVAFGEIGSQPG 435
F QN +A+D G + EV + G GSQPG
Sbjct: 557 FQEMVQNCMAQDLSWKGPAKKWEEVLLGLGVEGSQPG 593
>04_04_0058 - 22416949-22418196
Length = 415
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +1
Query: 112 PNSVVRTRXGARGPCPGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRNPNLGAPGSELSER 291
P SV+ T + P P PPA P + H RR + G +P G G + E
Sbjct: 30 PPSVILTPFASPSPAPWACPPAFPAPSPSPLHGAAGGRRDQGGYHGSPPGG--GGDADEH 87
Query: 292 NKRTIGIL 315
+R I ++
Sbjct: 88 RRRIINLI 95
>10_08_0550 + 18699187-18699272,18699298-18699544
Length = 110
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +1
Query: 220 PRRQRTGDPRNPNLGAP---GSELSERNKRTIGILRQLFPSFTQNSIAEDYL 366
PRR+ G R + GA G + +RT G+L+Q+ + +Q+ + DYL
Sbjct: 29 PRREGRGRRRPAHRGAGELGGEQARPGQRRTPGVLQQVSRAESQDVVGVDYL 80
>10_01_0129 + 1535823-1537196
Length = 457
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +1
Query: 130 TRXGARGPCP-GTEPPA*PCGRQA----GDHRDHRPRRQRTGDPRNPNLGAPGSELSE 288
+R +R P P G+ P + P ++ GD + PRR+R G+P +P+ PG+ SE
Sbjct: 35 SRRSSRRPRPSGSSPTSSPGQIRSPPDDGDGQPPPPRRRRRGEPPSPS-PVPGTATSE 91
>08_02_1464 - 27317282-27318037
Length = 251
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 251 TRTWAPPAPSSVRGTSAPSASCGNYSPPSRRTP 349
T W PPA + TS+ S C SPPS + P
Sbjct: 10 TGEWPPPALQAASTTSS-SEPCRRLSPPSSKRP 41
>04_03_0314 - 14238620-14240128
Length = 502
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 257 TWAPPAPSSVRGTSAPSASCGNYSPPSRRT--P*RKITC 367
T APP P++VR T AP+A+ S S R+ P + + C
Sbjct: 33 TAAPPTPTAVRCTPAPAAAPSAASAASARSIPPPKLVRC 71
>01_05_0507 -
22800124-22800163,22800411-22800554,22801291-22801850,
22803207-22803264,22803885-22804124,22804191-22804315
Length = 388
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 236 QETLATRTWAPPAPSSVRGTSAPSASCGNYSPPSRRTP 349
QE L T ++ APSSVR P A+ G ++ PS TP
Sbjct: 19 QEDLGTIAYSARAPSSVR-NMLPQAA-GGFTKPSASTP 54
>06_03_1330 - 29375494-29376912
Length = 472
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = -3
Query: 497 ICAVRSAGPRLAAPCWFRNAAPGW--LPISPNATRTSACWDSAPDNR*SSAMEFCVKEGN 324
+C + +A FR A P W LP +P A R S D R A + +G
Sbjct: 42 VCTAWQSADAASATARFRAAQPPWLMLPFNPTARRQSPSGGGGGDGRFLEARFLSLSDGR 101
Query: 323 S 321
+
Sbjct: 102 A 102
>05_02_0072 - 6334613-6335215
Length = 200
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +2
Query: 254 RTWAPPAPSSVRGTSAPSASCGNYSPPSRRTP*RK 358
R APPAPS+ TSAP+ S P R T R+
Sbjct: 134 RRKAPPAPSAASSTSAPTRSTATL--PRRATTRRR 166
>11_03_0097 + 9967351-9967969,9968180-9968259
Length = 232
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 157 PGTEPPA*PCGRQAGDHRDHRPRRQRTGDPRN 252
PGT P A P + H++ RPR R +N
Sbjct: 35 PGTPPAAAPAPARRRRHKNRRPRAHRRAAAKN 66
>10_08_0247 -
16151969-16152091,16152599-16152718,16153480-16153545,
16153663-16153711,16154048-16154185,16154291-16154377,
16155658-16155758,16155847-16155957,16156606-16157025,
16157819-16157983,16158863-16158994,16159189-16159233
Length = 518
Score = 27.9 bits (59), Expect = 5.5
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Frame = +1
Query: 223 RRQRTGDPRNPNLGAPGSELSERNKRTIGILRQLFPSFT--------QNSIAEDYLLSGA 378
+ + G + + PGS E N T GI+ LF SF+ NS+ +D SG+
Sbjct: 164 QEEEEGKRKEGSTRIPGSGRLEGNVATAGIIFLLFSSFSPALSSSLAPNSLLQDLRCSGS 223
Query: 379 ESQQAEVRVAFGEIGSQPGAALRNQQGAARRGPADRTAHI 498
Q + +I S LR Q+ R+G R A +
Sbjct: 224 SGQGVRKQ----QIRSH---KLRRQRQTGRKGEERRAAAV 256
>10_01_0274 - 2901033-2901778,2902475-2902634
Length = 301
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +2
Query: 269 PAPSSVRGTSAPSASCGNYSPPS 337
P PS V GT AP SC SPPS
Sbjct: 174 PPPSPVYGTPAPGCSC---SPPS 193
>09_06_0358 - 22504716-22505588
Length = 290
Score = 27.9 bits (59), Expect = 5.5
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +3
Query: 378 GVPASRGSRCVRRNRQPAGRRIAEPAGRREARTSRPHGAYPNIAEFYEVNSR 533
G ASR R R + +P GR A R R P AYP A +++ +SR
Sbjct: 109 GARASRSLRLKRPSGRPHGRLEVRVAVREPKRYYDPSPAYP--APYHQQSSR 158
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 230 SAQETLATRTWAPPA--PSSVRGTSAPSASCGNYSPPSRRTP 349
SAQ+ T AP P+S + T AP+A+ +PP+ TP
Sbjct: 20 SAQKATPTPAAAPATTPPASSKKTPAPAAAPTTTTPPAASTP 61
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 248 ATRTWAPPAPSSVRGTSAPSASCGNYSPPSRRTP 349
A+RTW PP PS +S P PPS P
Sbjct: 4 ASRTWPPPTPSPPPFSSRPRVVGPPPPPPSDPPP 37
>01_01_1046 - 8246740-8247504
Length = 254
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Frame = +3
Query: 300 HHRHPAATI---PLLHAELHSGRLPVI 371
HHRH A + PLL +LH G PV+
Sbjct: 56 HHRHAAVSRWYDPLLRVDLHGGGRPVL 82
>11_04_0152 + 14153539-14154060
Length = 173
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Frame = +3
Query: 363 PVIWGGVPASRGSRCVRRNRQPA----GRRIAEPAGRREARTSRP 485
P GGVP G RC + G +A AG +E R RP
Sbjct: 41 PARHGGVPVKFGQRCGLAGEEDGVPVPGEVVATSAGAQETRQRRP 85
>05_04_0144 + 18389877-18390431
Length = 184
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 375 GGVPASRGSRCVRRNRQPAGRRIAEPAGRRE 467
GGV A G R + +GRR A PA +RE
Sbjct: 62 GGVEAEGGGGGAARRDRSSGRRPARPARQRE 92
>04_03_0819 +
20018496-20019487,20019587-20019721,20019834-20019978,
20020135-20020416,20020649-20020910,20021028-20021224,
20021315-20021425,20022341-20022392,20022442-20022584,
20023121-20023210,20023300-20023800,20024108-20024176,
20024866-20025011,20025475-20025530,20026140-20026286,
20027405-20027530,20027608-20027876,20028026-20028127
Length = 1274
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 462 REARTSRPHGAYPNIAEFY 518
RE+RT+ P G+YPN+ Y
Sbjct: 359 RESRTAAPFGSYPNLLLVY 377
>03_01_0265 + 2046918-2049102,2052385-2052452,2052542-2052652,
2053164-2053250,2053476-2053684,2054115-2054340,
2054473-2054510,2054657-2054714,2055363-2055662,
2055832-2055903,2055988-2056112,2056240-2056312,
2056417-2056521
Length = 1218
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -1
Query: 463 RRPAGSAMRRPAGCRFRRTQRE-PLLAGTPP 374
RRPAG+ P R T R P +A TPP
Sbjct: 1025 RRPAGAVPPTPRRAALRATTRSPPAVAATPP 1055
>12_02_0675 + 21814048-21814368
Length = 106
Score = 27.1 bits (57), Expect = 9.7
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Frame = +1
Query: 130 TRXGARGPCPGTEPPA*PCG---RQAGDH-RDHRPRRQRT-----GDPRNPNLGAPGSEL 282
T G+RGP PG PP P G R+ G + R +P R+ GD R + +EL
Sbjct: 23 TPVGSRGPPPGGLPPT-PGGVHLRRKGPYRRPRKPTEVRSQAKCPGDLRAQSRALKATEL 81
Query: 283 SERNKRTIGILRQLFPSFTQ 342
++ +R L+ L S+ +
Sbjct: 82 AQGPRRIRSWLKGLQSSYQE 101
>12_01_0347 + 2658545-2659309
Length = 254
Score = 27.1 bits (57), Expect = 9.7
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -3
Query: 275 EPGAPRFGLRGSPV--RWRRGR*SL*SPACRPQGQAGGSVPGQGPRAPXRVRT 123
EPG+P+ G + R R R S RP+G GG PG G R R+
Sbjct: 123 EPGSPKVSCIGKVLSDRERARRHRRWSLETRPRGVGGGCCPGLGSLFVRRSRS 175
>05_03_0662 +
16732965-16733037,16733310-16733413,16734468-16734861,
16736291-16736901,16739238-16739289,16739771-16739826,
16739962-16740190,16740980-16741212,16741480-16741740
Length = 670
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +2
Query: 239 ETLATRTWAPP--APSSVRGTSAPSASC 316
+TL+T + APP +PS+ S PSA+C
Sbjct: 312 DTLSTHSAAPPPDSPSTAAPPSLPSAAC 339
>05_01_0212 + 1601861-1603600
Length = 579
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2
Query: 312 DADGALVPLTELGAGGAQVRVARVSCALAAGAMISMI 202
+ DGA PL AGGA VA LAAGA + +
Sbjct: 82 ETDGA-TPLHMAAAGGAANAVAATRLLLAAGASVDAL 117
>04_04_0689 -
27292271-27292709,27293717-27293856,27294572-27294664,
27295614-27296012,27296258-27296392,27296482-27296835
Length = 519
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +3
Query: 387 ASRGSRCVRRNRQPAGRRI--AEPAGRREAR 473
ASRG + RR R+P GRR+ P GRR+ +
Sbjct: 65 ASRGPKH-RRRRRPGGRRLPPPPPPGRRKGK 94
>03_06_0524 -
34502286-34502609,34502998-34503084,34503280-34503360,
34503962-34504114,34504898-34504954,34505050-34505296,
34505412-34505527,34506074-34506225,34506713-34506902,
34506976-34507169,34507256-34507388
Length = 577
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 305 MVRLFLSLSSEPGAPRFGLRGSPVRWRRG 219
M L LSL P P GL G R RRG
Sbjct: 1 MASLVLSLRIAPSTPPLGLGGGRFRGRRG 29
>03_05_0358 -
23438416-23439282,23440116-23440163,23440343-23440382,
23440459-23440610
Length = 368
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +3
Query: 375 GGVPASRGSRCVRRNRQPAGRRIAEPAGRREARTSRPHGAYPNIAE 512
GGV A GS V R R+ RR+AE R HG +A+
Sbjct: 152 GGVAAVVGSGGVGRRRRRTWRRLAEAVAGGHDSGHRRHGGPGRLAK 197
>02_01_0773 -
5760034-5760386,5760889-5760925,5761069-5761225,
5762584-5762773,5762873-5763154,5763582-5763645
Length = 360
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 367 LSGAESQQAEVRVAFGEIGSQPGAALRNQQGAARRGPADRTAHIQTSQNSTK 522
LSG ES + RV E+G +PG A + + A G A T+Q S +
Sbjct: 114 LSGMESDEEIGRVP--ELGLEPGGASTSGRAAGGGGGGAERAQSSTAQASAR 163
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 263 APPAPSSVRGTSAPSASCGNYSPPSRRTP 349
APP+PSS + P G YSP TP
Sbjct: 156 APPSPSSDTSPTTPGGG-GGYSPTPSDTP 183
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,420,025
Number of Sequences: 37544
Number of extensions: 380721
Number of successful extensions: 1687
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1685
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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