Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31040
         (430 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical pr...    71   4e-13
U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein ...    71   4e-13
Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical pr...    71   5e-13
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr...    32   0.15 
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr...    32   0.15 
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr...    32   0.15 
U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical pr...    26   10.0 

>Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical
           protein M117.2 protein.
          Length = 248

 Score = 70.9 bits (166), Expect = 4e-13
 Identities = 35/42 (83%), Positives = 36/42 (85%)
 Frame = +1

Query: 1   AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPAEG 126
           AELDTLNEDSYKDSTLIMQLLRDNLTLWTSD  G  D+  EG
Sbjct: 202 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDV-GAEDQEQEG 242


>U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein
           protein.
          Length = 248

 Score = 70.9 bits (166), Expect = 4e-13
 Identities = 35/42 (83%), Positives = 36/42 (85%)
 Frame = +1

Query: 1   AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPAEG 126
           AELDTLNEDSYKDSTLIMQLLRDNLTLWTSD  G  D+  EG
Sbjct: 202 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDV-GAEDQEQEG 242


>Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical
           protein F52D10.3a protein.
          Length = 248

 Score = 70.5 bits (165), Expect = 5e-13
 Identities = 35/46 (76%), Positives = 37/46 (80%), Gaps = 2/46 (4%)
 Frame = +1

Query: 1   AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE--PAEGGD 132
           AELDTLNEDSYKDSTLIMQLLRDNLTLWTSD   D  +    EGG+
Sbjct: 203 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDAATDDTDANETEGGN 248


>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical
           protein T25C12.3 protein.
          Length = 2103

 Score = 32.3 bits (70), Expect = 0.15
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = -2

Query: 327 DDTTFNFRRNGKVRCERLLTFLQARLASASVMIPRQTTFSNVTRFLINTDENKCVC 160
           D   FNFRR G+  C +LLT   +     +   P  T F+N T   +      C C
Sbjct: 276 DANGFNFRRTGRFSCMQLLT---SPAPPTTTQAPVTTCFNNGTLLNVANQGQTCFC 328


>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical
           protein T25C12.3 protein.
          Length = 2103

 Score = 32.3 bits (70), Expect = 0.15
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = -2

Query: 327 DDTTFNFRRNGKVRCERLLTFLQARLASASVMIPRQTTFSNVTRFLINTDENKCVC 160
           D   FNFRR G+  C +LLT   +     +   P  T F+N T   +      C C
Sbjct: 276 DANGFNFRRTGRFSCMQLLT---SPAPPTTTQAPVTTCFNNGTLLNVANQGQTCFC 328


>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical
           protein T25C12.3 protein.
          Length = 2103

 Score = 32.3 bits (70), Expect = 0.15
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = -2

Query: 327 DDTTFNFRRNGKVRCERLLTFLQARLASASVMIPRQTTFSNVTRFLINTDENKCVC 160
           D   FNFRR G+  C +LLT   +     +   P  T F+N T   +      C C
Sbjct: 276 DANGFNFRRTGRFSCMQLLT---SPAPPTTTQAPVTTCFNNGTLLNVANQGQTCFC 328


>U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical
           protein ZK154.5 protein.
          Length = 1105

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 188 IRKRVTFENVVWRGIITEADASLAC 262
           IRK+     VVW GI T+    + C
Sbjct: 864 IRKKPRLVEVVWNGITTQVPEEIVC 888


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,696,428
Number of Sequences: 27780
Number of extensions: 129786
Number of successful extensions: 474
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)