Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31040
(430 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10) ide... 75 2e-14
At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10) ide... 75 2e-14
At1g34760.1 68414.m04323 14-3-3 protein GF14 omicron (GRF11) ide... 70 8e-13
At1g26480.1 68414.m03229 14-3-3 protein GF14 iota (GRF12) identi... 69 1e-12
At2g42590.1 68415.m05270 14-3-3 protein GF14 mu (GRF9) identical... 69 2e-12
At5g65430.1 68418.m08228 14-3-3 protein GF14 kappa (GRF8) identi... 68 3e-12
At5g10450.1 68418.m01211 14-3-3 protein GF14 lambda (GRF6) (AFT1... 68 3e-12
At1g78300.1 68414.m09125 14-3-3 protein GF14 omega (GRF2) identi... 68 3e-12
At4g09000.1 68417.m01487 14-3-3-like protein GF14 chi / general... 67 4e-12
At1g35160.1 68414.m04360 14-3-3 protein GF14 phi (GRF4) identica... 67 4e-12
At5g38480.1 68418.m04651 14-3-3 protein GF14 psi (GRF3) (RCI1) i... 67 5e-12
At5g65430.2 68418.m08229 14-3-3 protein GF14 kappa (GRF8) identi... 66 7e-12
At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10) ide... 66 7e-12
At5g16050.1 68418.m01876 14-3-3 protein GF14 upsilon (GRF5) iden... 64 4e-11
At3g02520.1 68416.m00240 14-3-3 protein GF14 nu (GRF7) identical... 62 1e-10
At2g10450.1 68415.m01098 14-3-3 protein, putative / grf15, putat... 54 5e-08
At1g78220.1 68414.m09115 14-3-3 protein GF14 pi (GRF13) similar ... 31 0.33
At2g22310.1 68415.m02647 ubiquitin-specific protease 4 (UBP4) id... 29 1.0
At4g39910.1 68417.m05653 ubiquitin-specific protease 3 (UBP3) id... 29 1.3
At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein ... 28 2.3
At5g52530.2 68418.m06518 dentin sialophosphoprotein-related cont... 28 3.1
At5g52530.1 68418.m06517 dentin sialophosphoprotein-related cont... 28 3.1
At4g35030.1 68417.m04969 protein kinase family protein contains ... 27 7.1
At1g65690.1 68414.m07456 harpin-induced protein-related / HIN1-r... 27 7.1
>At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 254
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 1 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGD 132
AELD+LNE+SYKDSTLIMQLLRDNLTLWTSD +GDE +G D
Sbjct: 205 AELDSLNEESYKDSTLIMQLLRDNLTLWTSDLNEEGDERTKGAD 248
>At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 254
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 1 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGD 132
AELD+LNE+SYKDSTLIMQLLRDNLTLWTSD +GDE +G D
Sbjct: 205 AELDSLNEESYKDSTLIMQLLRDNLTLWTSDLNEEGDERTKGAD 248
>At1g34760.1 68414.m04323 14-3-3 protein GF14 omicron (GRF11)
identical to SP:Q9S9Z8, 14-3-3-like protein GF14 omicron
(General regulatory factor 11){Arabidopsis thaliana}
Length = 255
Score = 69.7 bits (163), Expect = 8e-13
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +1
Query: 1 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPAEG 126
AELD+LNEDSYKDSTLIMQLLRDNLTLWTSD + +G E ++G
Sbjct: 205 AELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLE-EGGEQSKG 245
>At1g26480.1 68414.m03229 14-3-3 protein GF14 iota (GRF12) identical
to 14-3-3 protein GF14iota GI:12963453 from [Arabidopsis
thaliana]
Length = 268
Score = 68.9 bits (161), Expect = 1e-12
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +1
Query: 1 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 114
AELDTL+E+SYKDSTLIMQLLRDNLTLWTSD DG E
Sbjct: 210 AELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGE 247
>At2g42590.1 68415.m05270 14-3-3 protein GF14 mu (GRF9) identical to
GF14 mu GI:3551052, SP:Q96299 from [Arabidopsis
thaliana]
Length = 263
Score = 68.5 bits (160), Expect = 2e-12
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +1
Query: 1 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPA 120
+ELDTLNE+SYKDSTLIMQLLRDNLTLWTSD +G + A
Sbjct: 207 SELDTLNEESYKDSTLIMQLLRDNLTLWTSDISEEGGDDA 246
>At5g65430.1 68418.m08228 14-3-3 protein GF14 kappa (GRF8) identical
to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from
[Arabidopsis thaliana]
Length = 248
Score = 67.7 bits (158), Expect = 3e-12
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1
Query: 1 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 114
AELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q DE
Sbjct: 210 AELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDE 247
>At5g10450.1 68418.m01211 14-3-3 protein GF14 lambda (GRF6) (AFT1)
identical to 14-3-3 GF14lambda GI:1345595 from
[Arabidopsis thaliana]
Length = 248
Score = 67.7 bits (158), Expect = 3e-12
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1
Query: 1 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 114
AELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q DE
Sbjct: 210 AELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDE 247
>At1g78300.1 68414.m09125 14-3-3 protein GF14 omega (GRF2) identical
to GF14omega isoform GI:487791 from [Arabidopsis
thaliana]
Length = 259
Score = 67.7 bits (158), Expect = 3e-12
Identities = 34/42 (80%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
Frame = +1
Query: 1 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD-GDEPAE 123
AELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q D DE E
Sbjct: 207 AELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDAADEIKE 248
>At4g09000.1 68417.m01487 14-3-3-like protein GF14 chi / general
regulatory factor 1 (GRF1) identical to 14-3-3 protein
GF14 chi chain GI:1702986, SP:P42643 from [Arabidopsis
thaliana]
Length = 267
Score = 67.3 bits (157), Expect = 4e-12
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +1
Query: 1 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD 105
AELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q D
Sbjct: 212 AELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD 246
>At1g35160.1 68414.m04360 14-3-3 protein GF14 phi (GRF4) identical
to GF14 protein phi chain GI:1493805, SP:P46077 from
[Arabidopsis thaliana]
Length = 267
Score = 67.3 bits (157), Expect = 4e-12
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +1
Query: 1 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 114
AELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q + E
Sbjct: 213 AELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDESPE 250
>At5g38480.1 68418.m04651 14-3-3 protein GF14 psi (GRF3) (RCI1)
identical to 14-3-3 protein GF14 psi GI:1168200,
SP:P42644
Length = 255
Score = 66.9 bits (156), Expect = 5e-12
Identities = 34/42 (80%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
Frame = +1
Query: 1 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSD-TQGDGDEPAE 123
AELDTL E+SYKDSTLIMQLLRDNLTLWTSD T GDE E
Sbjct: 206 AELDTLGEESYKDSTLIMQLLRDNLTLWTSDMTDEAGDEIKE 247
>At5g65430.2 68418.m08229 14-3-3 protein GF14 kappa (GRF8) identical
to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from
[Arabidopsis thaliana]
Length = 246
Score = 66.5 bits (155), Expect = 7e-12
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +1
Query: 1 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD 105
AELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q D
Sbjct: 210 AELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQMD 244
>At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 251
Score = 66.5 bits (155), Expect = 7e-12
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = +1
Query: 1 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDG 108
AELD+LNE+SYKDSTLIMQLLRDNLTLWTSD +G
Sbjct: 205 AELDSLNEESYKDSTLIMQLLRDNLTLWTSDLNEEG 240
>At5g16050.1 68418.m01876 14-3-3 protein GF14 upsilon (GRF5)
identical to 14-3-3 protein GF14 upsilon GI:2232148 from
[Arabidopsis thaliana]
Length = 268
Score = 64.1 bits (149), Expect = 4e-11
Identities = 31/42 (73%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
Frame = +1
Query: 1 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD-GDEPAE 123
+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD + GD+ E
Sbjct: 209 SELDTLGEESYKDSTLIMQLLRDNLTLWTSDLNDEAGDDIKE 250
>At3g02520.1 68416.m00240 14-3-3 protein GF14 nu (GRF7) identical to
14-3-3 protein GF14 nu GI:1531631 from [Arabidopsis
thaliana]
Length = 265
Score = 62.5 bits (145), Expect = 1e-10
Identities = 31/43 (72%), Positives = 34/43 (79%), Gaps = 2/43 (4%)
Frame = +1
Query: 1 AELDTLNEDSYKDSTLIMQLLRDNLTLWTSD--TQGDGDEPAE 123
+ELDTL E+SYKDSTLIMQLLRDNLTLW SD + GDE E
Sbjct: 207 SELDTLGEESYKDSTLIMQLLRDNLTLWNSDINDEAGGDEIKE 249
>At2g10450.1 68415.m01098 14-3-3 protein, putative / grf15, putative
contains similarity to GF14 psi chain GI:166717,
SP:P42644 from [Arabidopsis thaliana]
Length = 82
Score = 53.6 bits (123), Expect = 5e-08
Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = +1
Query: 7 LDTLNEDSYKDSTLIMQLLRDNLTLWTSD-TQGDGDEPAE 123
LD L ++ YKDSTLIM++LRDNLT WTSD T GDE E
Sbjct: 21 LDALGDELYKDSTLIMKILRDNLTFWTSDMTDEAGDEIKE 60
>At1g78220.1 68414.m09115 14-3-3 protein GF14 pi (GRF13) similar to
GF14 epsilon isoform GI:1022778 from [Arabidopsis
thaliana]; contains Pfam profile: PF00244 14-3-3
proteins
Length = 245
Score = 31.1 bits (67), Expect = 0.33
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +1
Query: 4 ELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGD 111
ELD L+++ ++S I+++L+ NL+ WTS GDG+
Sbjct: 207 ELDGLDKNICEESMYIIEMLKYNLSTWTS---GDGN 239
>At2g22310.1 68415.m02647 ubiquitin-specific protease 4 (UBP4)
identical to GI:2347100
Length = 365
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 200 VTFENVVWRGIITEADASLACKNVKSRSQRTLPFRLKLNVVSSLT 334
VT+ + +++GI+T L C+ V +R + L L + SS+T
Sbjct: 164 VTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDIEQNSSIT 208
>At4g39910.1 68417.m05653 ubiquitin-specific protease 3 (UBP3)
identical to GI:2347098
Length = 371
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 200 VTFENVVWRGIITEADASLACKNVKSRSQRTLPFRLKLNVVSSLT 334
VT+ + +++GI+T L C+ V +R + L L + SS+T
Sbjct: 169 VTWVHNIFQGILTNETRCLRCETVTARDETFLDLSLDIEQNSSIT 213
>At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type, domain
Length = 745
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 198 RFLINTDENKCVCWXECGEILVVAALG 118
RF++N D C+C EC + V ALG
Sbjct: 34 RFILN-DRRCCICKTECPVVFVTKALG 59
>At5g52530.2 68418.m06518 dentin sialophosphoprotein-related
contains weak similarity to dentin sialophosphoprotein
precursor (Dentin matrix protein-3) (DMP- 3)
(Swiss-Prot:P97399) [Mus musculus]
Length = 828
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +3
Query: 135 LISRRTXPSTRICSHRCL*ENE*HSRTSSGAVSSPKPTRASL 260
+++ + P T +C+ ++ HSR +SG + +PK T +L
Sbjct: 217 IVAPQKHPLTNLCNELADEQSVEHSRVTSGGIIAPKKTCIAL 258
>At5g52530.1 68418.m06517 dentin sialophosphoprotein-related
contains weak similarity to dentin sialophosphoprotein
precursor (Dentin matrix protein-3) (DMP- 3)
(Swiss-Prot:P97399) [Mus musculus]
Length = 828
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +3
Query: 135 LISRRTXPSTRICSHRCL*ENE*HSRTSSGAVSSPKPTRASL 260
+++ + P T +C+ ++ HSR +SG + +PK T +L
Sbjct: 217 IVAPQKHPLTNLCNELADEQSVEHSRVTSGGIIAPKKTCIAL 258
>At4g35030.1 68417.m04969 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 321
Score = 26.6 bits (56), Expect = 7.1
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 212 NVVWRGIITEADASLACKNVKSRSQRTLP-FRLKLNVVSSLT 334
N V+RGI+ E +A K +KS S+ + F ++N++SSL+
Sbjct: 116 NEVYRGIL-EDGKGIAVKILKSSSKEAMTNFVHEINIISSLS 156
>At1g65690.1 68414.m07456 harpin-induced protein-related /
HIN1-related / harpin-responsive protein-related similar
to hin1 homolog (GI:13122296) [Arabidopsis thaliana];
similar to hin1 (GI:22830759) [Nicotiana tabacum];
contains 1 transmembrane domain;
Length = 252
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 171 KCVCWXECGEILVVAALGRLVAIALSV*RPK 79
+C C+ C +L+V A+G + I V +PK
Sbjct: 64 RCFCYTFCFLLLLVVAVGASIGILYLVFKPK 94
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,103,061
Number of Sequences: 28952
Number of extensions: 117573
Number of successful extensions: 359
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 675111616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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