Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31039
         (843 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    31   1.0  
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z69794-3|CAA93680.1|  747|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z82083-4|CAB04972.1|  371|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U53155-7|AAC48264.1|  177|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AL032632-8|CAA21592.2|  420|Caenorhabditis elegans Hypothetical ...    28   7.2  
Z92849-14|CAE17857.1|  359|Caenorhabditis elegans Hypothetical p...    28   9.5  
Z78414-4|CAE17982.1|  359|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +3

Query: 246 SSGALPTACARCSNKQKAAFRTLLLAIRARSEPSFLELLDKYDPSRS 386
           SS   PTA  R S    AAF   L A+  +   S L++++KYDP ++
Sbjct: 383 SSDVAPTATCRTS-VGVAAFNGSLYAVGGQDGESCLDVVEKYDPRKN 428


>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical protein
            ZK287.4 protein.
          Length = 1208

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 133  RFWDSSAAGSLIPPPSAPTRKTANSSCCRLCCNQ 32
            RF   +  G+   P  +     +NS C RLCCNQ
Sbjct: 1152 RFSFQNCRGAAFSPTGSLNNFVSNSQCNRLCCNQ 1185


>Z69794-3|CAA93680.1|  747|Caenorhabditis elegans Hypothetical
           protein R03G8.6 protein.
          Length = 747

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 95  WYQAPGSRAIPETTISTSTLSYKTTGSCSVILNASWTG 208
           WYQ PG   +    ++ ++ S +     SVI+NA+  G
Sbjct: 519 WYQEPGEARVQMAWLNRNSTSLELVADDSVIINANSIG 556


>Z82083-4|CAB04972.1|  371|Caenorhabditis elegans Hypothetical
           protein ZK1010.6 protein.
          Length = 371

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 584 LFSNSVSLLFIDWCFVFTPFIYFSSMWIRL 673
           +F+NSV   F+D  F   P  ++  +WI L
Sbjct: 184 VFTNSVGTCFVDPMFTPEPLNFYGPLWIAL 213


>U53155-7|AAC48264.1|  177|Caenorhabditis elegans Hypothetical
           protein ZC513.2 protein.
          Length = 177

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +1

Query: 145 INAILQNDRILLGYFKCVMD-RGPCTKDGKTFKRALPEHCRQRVRGALISRRQ 300
           +NA+++N   L+G    V++  GP +   KTF+  + +  RQR+     SR Q
Sbjct: 89  MNAVVRNCSALIGNSHIVLNPTGPMSIFVKTFEPMINDSVRQRIPEMFCSRLQ 141


>AL032632-8|CAA21592.2|  420|Caenorhabditis elegans Hypothetical
           protein Y11D7A.13 protein.
          Length = 420

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 624 VLFSHHLFIFHQCGYD 671
           VLF  HL++F +C YD
Sbjct: 144 VLFDEHLYVFDKCSYD 159


>Z92849-14|CAE17857.1|  359|Caenorhabditis elegans Hypothetical
           protein H12D21.11 protein.
          Length = 359

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +2

Query: 563 VIKNMEFLFSNSVS-LLFIDWCFVFTPFIYFSSMWIRLKLRVIIYVFHR 706
           +++N+    + S++ +L+ +WC +FT  + F        +RVII +FHR
Sbjct: 1   MLQNLSTASTGSLNDILYSNWCPIFTLILLF--------VRVIIVIFHR 41


>Z78414-4|CAE17982.1|  359|Caenorhabditis elegans Hypothetical
           protein H12D21.11 protein.
          Length = 359

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +2

Query: 563 VIKNMEFLFSNSVS-LLFIDWCFVFTPFIYFSSMWIRLKLRVIIYVFHR 706
           +++N+    + S++ +L+ +WC +FT  + F        +RVII +FHR
Sbjct: 1   MLQNLSTASTGSLNDILYSNWCPIFTLILLF--------VRVIIVIFHR 41


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,083,856
Number of Sequences: 27780
Number of extensions: 435021
Number of successful extensions: 1402
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1398
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)