Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31030
(752 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 181 1e-44
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 103 5e-21
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 82 1e-14
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 73 8e-12
UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; ... 71 3e-11
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 71 4e-11
UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:... 68 2e-10
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 64 5e-09
UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-direct... 63 6e-09
UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-direct... 58 2e-07
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 57 4e-07
UniRef50_A7SMU7 Cluster: Predicted protein; n=10; Nematostella v... 43 0.007
UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotei... 42 0.012
UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and c... 42 0.016
UniRef50_UPI0000E4756E Cluster: PREDICTED: similar to endonuclea... 42 0.022
UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2... 41 0.029
UniRef50_A0ND98 Cluster: ENSANGP00000028649; n=1; Anopheles gamb... 40 0.050
UniRef50_Q1ZBP6 Cluster: Putative uncharacterized protein; n=1; ... 38 0.20
UniRef50_UPI0000587F4D Cluster: PREDICTED: similar to endonuclea... 36 1.4
UniRef50_UPI0000E478ED Cluster: PREDICTED: similar to tryptophan... 35 1.9
UniRef50_UPI0000E46F21 Cluster: PREDICTED: similar to endonuclea... 35 1.9
UniRef50_UPI0000E49EC7 Cluster: PREDICTED: similar to endonuclea... 35 2.5
UniRef50_UPI0000E47DE5 Cluster: PREDICTED: similar to endonuclea... 35 2.5
UniRef50_UPI0000E467A7 Cluster: PREDICTED: hypothetical protein,... 35 2.5
UniRef50_UPI00005A9609 Cluster: PREDICTED: similar to USP6 N-ter... 34 3.3
UniRef50_UPI000058732A Cluster: PREDICTED: similar to endonuclea... 34 4.3
UniRef50_A0L817 Cluster: Putative uncharacterized protein; n=1; ... 34 4.3
UniRef50_Q5DBK9 Cluster: SJCHGC08043 protein; n=1; Schistosoma j... 34 4.3
UniRef50_Q4QQE0 Cluster: Endonuclease-reverse transcriptase; n=1... 34 4.3
UniRef50_Q0V1W4 Cluster: Predicted protein; n=1; Phaeosphaeria n... 34 4.3
UniRef50_Q7PUY1 Cluster: ENSANGP00000009609; n=1; Anopheles gamb... 33 5.7
UniRef50_P34620 Cluster: Uncharacterized protein ZK1236.4; n=2; ... 33 7.6
UniRef50_UPI0000E493DE Cluster: PREDICTED: similar to endonuclea... 33 10.0
UniRef50_Q20227 Cluster: Putative uncharacterized protein; n=2; ... 33 10.0
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-like
protein; n=9; cellular organisms|Rep: Endonuclease and
reverse transcriptase-like protein - Bombyx mori (Silk
moth)
Length = 960
Score = 181 bits (441), Expect = 1e-44
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +1
Query: 1 AAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRF 180
AAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRF
Sbjct: 788 AAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRF 847
Query: 181 CRLAVGAPWFVRNVDLHDDLGLESI 255
CRLAVGAPWFVRNVDLHDDLGLESI
Sbjct: 848 CRLAVGAPWFVRNVDLHDDLGLESI 872
Score = 128 bits (310), Expect = 1e-28
Identities = 59/66 (89%), Positives = 60/66 (90%)
Frame = +3
Query: 255 RKYMKSASERYFDKAMRHDNRLIVDXADYSPNPDHAGASHRRRPRHVLTDPSDRITFALD 434
RK+MKS SERYFDKAMRHDNRLIV ADYSPNPDHAGASHRRRPRHVLTDPSD IT ALD
Sbjct: 873 RKHMKSVSERYFDKAMRHDNRLIVAAADYSPNPDHAGASHRRRPRHVLTDPSDPITLALD 932
Query: 435 AFSSNT 452
FSSNT
Sbjct: 933 TFSSNT 938
>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
mylitta|Rep: Reverse transcriptase-like - Antheraea
mylitta (Tasar silkworm)
Length = 186
Score = 103 bits (247), Expect = 5e-21
Identities = 44/82 (53%), Positives = 61/82 (74%)
Frame = +1
Query: 10 ILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRL 189
+LGRL+P++C +SKMSLR+K+ LYKTCIRPV+TY+ VFAH ++ + LQ Q+R R
Sbjct: 2 VLGRLHPLLCHKSKMSLRHKLILYKTCIRPVITYSCPVFAHMSKDNFHKLQVFQNRVLRK 61
Query: 190 AVGAPWFVRNVDLHDDLGLESI 255
G PW++R VDLH +L + SI
Sbjct: 62 VTGTPWYIRRVDLHRNLEIPSI 83
Score = 56.8 bits (131), Expect = 5e-07
Identities = 27/60 (45%), Positives = 36/60 (60%)
Frame = +3
Query: 261 YMKSASERYFDKAMRHDNRLIVDXADYSPNPDHAGASHRRRPRHVLTDPSDRITFALDAF 440
Y+KS + YF+KA H + L+V A+Y P P+ A RRRPRH+ DP D IT D +
Sbjct: 86 YVKSLTISYFEKAANHPSPLVVSAANYQPVPN--AARPRRRPRHIFIDPPDEITAVNDQY 143
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/81 (46%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Frame = +1
Query: 16 GRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHA-ARTHIDTLQSLQSRFCRLA 192
G L ++C+RS +S+ NK+ LYK+ IRP MTYASV +A A +T + LQ+ Q++F R A
Sbjct: 1246 GMLRSLVCRRSALSIDNKLLLYKSVIRPTMTYASVAWAFAPCKTRMHKLQTFQNKFLRQA 1305
Query: 193 VGAPWFVRNVDLHDDLGLESI 255
APWFVRN LH ++ + ++
Sbjct: 1306 FNAPWFVRNNQLHREVKMPTM 1326
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 72.9 bits (171), Expect = 8e-12
Identities = 31/78 (39%), Positives = 53/78 (67%)
Frame = +1
Query: 22 LYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGA 201
L+ +I RS +SL K LY + ++P+ TY S ++ +A+R++ID +Q QSR R+ GA
Sbjct: 767 LHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
Query: 202 PWFVRNVDLHDDLGLESI 255
PW++RN ++H DL ++ +
Sbjct: 827 PWYLRNENIHRDLKIKLV 844
>UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; n=80;
Culicimorpha|Rep: Reverse transcriptase homolog protein -
Chironomus thummi
Length = 883
Score = 70.9 bits (166), Expect = 3e-11
Identities = 31/81 (38%), Positives = 49/81 (60%)
Frame = +1
Query: 13 LGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLA 192
L +LYP+I + ++ +RNK+ +YK IRP+ TY F A+TH+ LQ LQ++F R+
Sbjct: 781 LRQLYPLISRNLQLDVRNKLLIYKLAIRPIFTYGCSAFGSMAKTHLQKLQVLQNKFLRIV 840
Query: 193 VGAPWFVRNVDLHDDLGLESI 255
+ + R DLH + + SI
Sbjct: 841 LNKTRYERITDLHTEAKIPSI 861
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 70.5 bits (165), Expect = 4e-11
Identities = 31/77 (40%), Positives = 47/77 (61%)
Frame = +1
Query: 25 YPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAP 204
Y ++ RSK+SL NK+T+YK + P Y ++ A +HI +Q++Q++ RL G
Sbjct: 777 YWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCE 836
Query: 205 WFVRNVDLHDDLGLESI 255
WFVRN LH DL L ++
Sbjct: 837 WFVRNTTLHRDLKLATV 853
>UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep: ORF1
- Drosophila melanogaster (Fruit fly)
Length = 884
Score = 68.1 bits (159), Expect = 2e-10
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = +1
Query: 10 ILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRL 189
I+ LYP+I ++SK+S+ NK+ ++KT P++ Y S V+ A+THI LQ Q++ +L
Sbjct: 797 IICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKL 856
Query: 190 AVGAPWFVRNVDLHDDLGLESI 255
+ P++ LH G++ +
Sbjct: 857 IMNLPYYTNTKYLHIKAGVQKV 878
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 63.7 bits (148), Expect = 5e-09
Identities = 28/83 (33%), Positives = 52/83 (62%)
Frame = +1
Query: 13 LGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLA 192
+ R+ +I R+K+SL KV +YK+ + P + Y V+ AA++H++ ++ LQ++ R
Sbjct: 778 VARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRI 837
Query: 193 VGAPWFVRNVDLHDDLGLESIGN 261
GAPW++R D+ DL + +G+
Sbjct: 838 SGAPWYMRTRDIERDLKVPKLGD 860
>UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 494
Score = 63.3 bits (147), Expect = 6e-09
Identities = 26/81 (32%), Positives = 52/81 (64%)
Frame = +1
Query: 13 LGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLA 192
L L ++C+++ ++L NK LY + +RP+++YAS + AA +++ + ++Q++ R
Sbjct: 368 LKSLNSLLCRKTHLNLANKRLLYLSTLRPILSYASPCWGSAASSNLSHILTVQNKIIRQI 427
Query: 193 VGAPWFVRNVDLHDDLGLESI 255
APWF+RN +L DL + ++
Sbjct: 428 SNAPWFIRNKNLEKDLKIPNL 448
>UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 421
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = +1
Query: 16 GRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA-RTHIDTLQSLQSRFCRLA 192
G L ++C+RS +S+ NK+ LYK+ IRP MTYA V +A A +T + LQ+ Q++F R A
Sbjct: 337 GMLRSLVCRRSALSIDNKLLLYKSVIRPTMTYAPVAWAFAPYKTRMHKLQTFQNKFLRQA 396
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 57.2 bits (132), Expect = 4e-07
Identities = 28/90 (31%), Positives = 50/90 (55%)
Frame = +1
Query: 31 MICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWF 210
++ ++S M+LR K +Y C+ P+ Y ++ AA+++ + +Q LQ+R R P++
Sbjct: 785 LLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYY 844
Query: 211 VRNVDLHDDLGLESIGNT*SQRRNDTSIRL 300
VR LH DL L ++ S+ + S RL
Sbjct: 845 VRGTTLHRDLNLHTVEEQISRHTSRYSDRL 874
>UniRef50_A7SMU7 Cluster: Predicted protein; n=10; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 205
Score = 43.2 bits (97), Expect = 0.007
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +1
Query: 40 KRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRN 219
K+ +SL+ + Y + I+P++ Y ++V+ + HID + Q R R+ + W +
Sbjct: 115 KKKFLSLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKWDAPS 174
Query: 220 VDLHDDLGL 246
L ++L +
Sbjct: 175 KPLFEELNI 183
>UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1249
Score = 42.3 bits (95), Expect = 0.012
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +1
Query: 4 AFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFC 183
AFI +L P +S +S + K+ + IR + TYA V+ A +H+ ++ R
Sbjct: 1100 AFI--QLRPFFNNKS-VSYKTKLRAFSAIIRSIQTYAIPVWGAAGESHLKPIEGSFFRML 1156
Query: 184 RLAVGAPWFVRNVDLHDDLGLES 252
R + PW++RN + ++ + S
Sbjct: 1157 RSILDIPWYIRNKQILKEVAITS 1179
>UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and
camp-inhibited cgmp 3,5-cyclic phosphodiesterase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
camp and camp-inhibited cgmp 3,5-cyclic phosphodiesterase
- Strongylocentrotus purpuratus
Length = 1197
Score = 41.9 bits (94), Expect = 0.016
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Frame = +1
Query: 16 GRLYPMICKRSKMS--LRNKVTLYKTCIRPVMTYASVVFAHAARTH-IDTLQSLQSRFCR 186
GR MIC+ K S + + V +Y T IRP++ YAS +++ + T+ I+ ++ +Q R CR
Sbjct: 992 GRRIFMICRLRKASVPMHDLVNIYSTYIRPLLEYASPLWSTSITTNQINDIERIQKRICR 1051
Query: 187 L 189
+
Sbjct: 1052 I 1052
>UniRef50_UPI0000E4756E Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 293
Score = 41.5 bits (93), Expect = 0.022
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 58 LRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAV 195
LR KV YKT + PV+ YA+VV+ + +I L+ +Q R+ R A+
Sbjct: 215 LRTKVLCYKTLVLPVLEYAAVVWDPFTQKNITRLEKIQRRYARFAL 260
>UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2;
Schistosoma|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 831
Score = 41.1 bits (92), Expect = 0.029
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +1
Query: 1 AAFILGRLYPMI--CKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQS 174
A+FI+ + +I ++ + K+TLYK C+RP + Y S +F++ T ++ +Q
Sbjct: 741 ASFIISKARRLIGFITKNFFTTDAKLTLYKICVRPSLEYCSFIFSNMNTTDKIRVEDVQR 800
Query: 175 RFCRLAVGA 201
RF R +G+
Sbjct: 801 RFTRQLLGS 809
>UniRef50_A0ND98 Cluster: ENSANGP00000028649; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000028649 - Anopheles gambiae
str. PEST
Length = 158
Score = 40.3 bits (90), Expect = 0.050
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 13 LGRLYPMICKRSK-MSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRL 189
LG L + C S M L+ TL+ + +R ++ Y SVV++ ARTH++ ++ +Q F RL
Sbjct: 79 LGLLKKIACDFSDPMCLK---TLFCSLVRSILEYCSVVWSPTARTHVERIERVQRSFTRL 135
Query: 190 AVGAP 204
+ P
Sbjct: 136 SSPIP 140
>UniRef50_Q1ZBP6 Cluster: Putative uncharacterized protein; n=1;
Psychromonas sp. CNPT3|Rep: Putative uncharacterized
protein - Psychromonas sp. CNPT3
Length = 776
Score = 38.3 bits (85), Expect = 0.20
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +1
Query: 76 LYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDL 228
LYKT + V+ Y S+ F A+ T I L+ +Q R RLA+G+ N+ L
Sbjct: 464 LYKTTVLSVLEYGSICFHWASNTQILKLERIQYRGLRLALGSMKSTHNMSL 514
>UniRef50_UPI0000587F4D Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 405
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +1
Query: 34 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 186
+ + ++ + KV Y T ++P+M YAS+++ + +I L+ +Q R+ R
Sbjct: 242 VTTKGQLHPKVKVLCYNTLLQPIMEYASIIWDPHTQANIKKLEMVQRRYVR 292
>UniRef50_UPI0000E478ED Cluster: PREDICTED: similar to tryptophan
2,3-dioxygenase; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to tryptophan 2,3-dioxygenase -
Strongylocentrotus purpuratus
Length = 413
Score = 35.1 bits (77), Expect = 1.9
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 19 RLYPMI-CKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAART-HIDTLQSLQSRFCRLA 192
RLY + ++ ++ + V +Y IRPV+ YAS V++ + T + ++ +Q R CR+
Sbjct: 39 RLYIVYRLRKCRLPTSDLVAIYAMYIRPVLEYASPVWSSSLTTAQSNDIERVQKRVCRVI 98
Query: 193 VGAP-WFVRNVDLHDDL 240
+ WF + + D +
Sbjct: 99 LAYELWFKQTIHEVDSI 115
>UniRef50_UPI0000E46F21 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 561
Score = 35.1 bits (77), Expect = 1.9
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 61 RNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRL 189
++ V LYKT +RP + Y S V+ H D L+ +Q R +L
Sbjct: 423 KSLVLLYKTLVRPKLEYCSTVWNHLLNKDKDKLEKVQRRATKL 465
>UniRef50_UPI0000E49EC7 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 499
Score = 34.7 bits (76), Expect = 2.5
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 46 SKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVG 198
S S KV YK +RPV+ Y V+ + +I L+ +Q R+ R +G
Sbjct: 390 SSCSRNIKVLCYKALLRPVLEYGCKVWDPFTKDNIRQLEMVQRRYTRFTIG 440
>UniRef50_UPI0000E47DE5 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 862
Score = 34.7 bits (76), Expect = 2.5
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 40 KRSKMSLRNK--VTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRL 189
+RS +L+ K ++LYKT IRP + Y + V+ + D L+ +Q R RL
Sbjct: 680 RRSFSALQKKGFLSLYKTIIRPTLEYCNSVWCPILKRDEDILEKVQQRATRL 731
>UniRef50_UPI0000E467A7 Cluster: PREDICTED: hypothetical protein,
partial; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 612
Score = 34.7 bits (76), Expect = 2.5
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 40 KRSKMSLRNK--VTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRL 189
+RS +L+ K ++LYKT IRP + Y + V+ + D L+ +Q R RL
Sbjct: 454 RRSFSALQKKGFLSLYKTIIRPTLEYCNSVWCPILKRDEDILEKVQQRATRL 505
>UniRef50_UPI00005A9609 Cluster: PREDICTED: similar to USP6
N-terminal like protein (Related to the N terminus of
tre) (RN-tre), partial; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to USP6 N-terminal like protein
(Related to the N terminus of tre) (RN-tre), partial -
Canis familiaris
Length = 386
Score = 34.3 bits (75), Expect = 3.3
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 611 SNCFANESTTGSESRPAEKIRRETQRADAWVRL 513
S C ++ G R A+K+R+ET RAD W+++
Sbjct: 27 SPCAGDKELPGPSPREAKKLRQETWRADKWIKM 59
>UniRef50_UPI000058732A Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase, partial; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 242
Score = 33.9 bits (74), Expect = 4.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 67 KVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 186
KV Y T ++P+M YAS+ + + +I L+ +Q R+ R
Sbjct: 128 KVLCYNTLLQPIMEYASITWDPRTQANIKKLEVVQRRYVR 167
>UniRef50_A0L817 Cluster: Putative uncharacterized protein; n=1;
Magnetococcus sp. MC-1|Rep: Putative uncharacterized
protein - Magnetococcus sp. (strain MC-1)
Length = 416
Score = 33.9 bits (74), Expect = 4.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 730 WPRRPFPVFTRTGWRAMFSQEGWDLL 653
W R P P+FT GW+ F+ GW LL
Sbjct: 177 WGRAPKPLFTGAGWQLFFTWLGWLLL 202
>UniRef50_Q5DBK9 Cluster: SJCHGC08043 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08043 protein - Schistosoma
japonicum (Blood fluke)
Length = 117
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +1
Query: 64 NKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLG 243
+++ LYK C+RP++ Y ++ + + ++ +Q F + +G + D LG
Sbjct: 13 SRLVLYKACVRPLLEYCPLILSSHRISDKLKIEGIQRYFTKTMLGIDCALNYTTRCDTLG 72
Query: 244 LESI 255
LE +
Sbjct: 73 LEPL 76
>UniRef50_Q4QQE0 Cluster: Endonuclease-reverse transcriptase; n=1;
Schistosoma mansoni|Rep: Endonuclease-reverse
transcriptase - Schistosoma mansoni (Blood fluke)
Length = 1067
Score = 33.9 bits (74), Expect = 4.3
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 43 RSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 186
R+ K+ LYK C+RP++ Y S + ++ + I ++ +Q F R
Sbjct: 884 RNFFQKETKIILYKACVRPIVEYCSFLSSNLRLSDILKVEGIQRDFTR 931
>UniRef50_Q0V1W4 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 214
Score = 33.9 bits (74), Expect = 4.3
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +1
Query: 7 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 186
F++ + P R K +LR ++L ++T +VV+AH + L ++Q+ CR
Sbjct: 77 FLVMSVVPKFALRQKYTLRALISLGTILPSFLLTLMTVVWAHILNRNAPELDTIQTWSCR 136
Query: 187 LAVGAP 204
A AP
Sbjct: 137 YANSAP 142
>UniRef50_Q7PUY1 Cluster: ENSANGP00000009609; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000009609 - Anopheles gambiae
str. PEST
Length = 1924
Score = 33.5 bits (73), Expect = 5.7
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -1
Query: 671 RGLGFAKQCPSASEET*QLKSNCFANESTTGSESRPAEKIRRET 540
RG G +K+ P T L S+C+ ++ TTG E R K ET
Sbjct: 1080 RGAGTSKKLPRKKYITAGLFSDCYKDDGTTGGEGRSGPKTPPET 1123
>UniRef50_P34620 Cluster: Uncharacterized protein ZK1236.4; n=2;
Caenorhabditis elegans|Rep: Uncharacterized protein
ZK1236.4 - Caenorhabditis elegans
Length = 364
Score = 33.1 bits (72), Expect = 7.6
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 19 RLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 186
+L+ + S S++ LYKT IRP + Y +V+ + + ++S+Q+ F R
Sbjct: 208 QLFQIFNTYSSKSVKLMTLLYKTFIRPRLEYGTVITSPIKKNDSKAIESVQNAFTR 263
>UniRef50_UPI0000E493DE Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1186
Score = 32.7 bits (71), Expect = 10.0
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +1
Query: 67 KVT-LYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRL 189
K+T LY++ IRP + YAS ++ + +I+ L+ +Q++ RL
Sbjct: 934 KITILYQSIIRPALEYASSAWSPLTKKNIEKLEKVQTKCLRL 975
>UniRef50_Q20227 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 420
Score = 32.7 bits (71), Expect = 10.0
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +3
Query: 306 HDNRLIVDXADYSPNPDHAGASHRRRPRHVLTDPSD 413
H R D PN DH G +H RR R+ DPSD
Sbjct: 229 HRRRRSDDHDPNDPNVDHIGHNHHRRKRNHDDDPSD 264
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,753,101
Number of Sequences: 1657284
Number of extensions: 12968954
Number of successful extensions: 30280
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 29415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30274
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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