Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31029
(874 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 172 2e-43
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 172 2e-43
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 172 2e-43
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 172 2e-43
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 171 4e-43
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 171 4e-43
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 168 4e-42
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 108 5e-24
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 106 2e-23
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 106 2e-23
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 105 4e-23
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 105 5e-23
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 103 1e-22
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 103 2e-22
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 103 2e-22
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 99 2e-21
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 71 1e-12
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 70 2e-12
At4g38980.1 68417.m05523 expressed protein 32 0.44
At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger) fa... 30 1.8
At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger) fa... 30 1.8
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 4.1
At3g06140.1 68416.m00705 zinc finger (C3HC4-type RING finger) fa... 29 4.1
At4g18120.1 68417.m02694 RNA recognition motif (RRM)-containing ... 28 7.1
At5g42640.1 68418.m05191 zinc finger (C2H2 type) family protein ... 28 9.4
At4g34440.1 68417.m04894 protein kinase family protein contains ... 28 9.4
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 172 bits (419), Expect = 2e-43
Identities = 84/125 (67%), Positives = 93/125 (74%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F + +HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTAKKSKTG 580
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGG G + KKSK G
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 581 VRHLP 595
P
Sbjct: 169 FTVYP 173
Score = 132 bits (318), Expect = 4e-31
Identities = 53/63 (84%), Positives = 59/63 (93%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 258 TYP 266
P
Sbjct: 61 HVP 63
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/57 (54%), Positives = 36/57 (63%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYNFYPHQPTQTLEHSD 678
+GSG SLL+ERLSVDYGK+ P PQVST+VVEPYN LEH+D
Sbjct: 145 TGSGLGSLLLERLSVDYGKKS-KLGFTVYPSPQVSTSVVEPYNSV-LSTHSLLEHTD 199
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 172 bits (419), Expect = 2e-43
Identities = 84/125 (67%), Positives = 93/125 (74%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F + +HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTAKKSKTG 580
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGG G + KKSK G
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 581 VRHLP 595
P
Sbjct: 169 FTVYP 173
Score = 132 bits (318), Expect = 4e-31
Identities = 53/63 (84%), Positives = 59/63 (93%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 258 TYP 266
P
Sbjct: 61 HVP 63
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/57 (54%), Positives = 36/57 (63%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYNFYPHQPTQTLEHSD 678
+GSG SLL+ERLSVDYGK+ P PQVST+VVEPYN LEH+D
Sbjct: 145 TGSGLGSLLLERLSVDYGKKS-KLGFTVYPSPQVSTSVVEPYNSV-LSTHSLLEHTD 199
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 172 bits (419), Expect = 2e-43
Identities = 84/125 (67%), Positives = 93/125 (74%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F + +HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTAKKSKTG 580
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGG G + KKSK G
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 581 VRHLP 595
P
Sbjct: 169 FTVYP 173
Score = 133 bits (321), Expect = 2e-31
Identities = 53/63 (84%), Positives = 60/63 (95%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 258 TYP 266
P
Sbjct: 61 HVP 63
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/57 (54%), Positives = 36/57 (63%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYNFYPHQPTQTLEHSD 678
+GSG SLL+ERLSVDYGK+ P PQVST+VVEPYN LEH+D
Sbjct: 145 TGSGLGSLLLERLSVDYGKKS-KLGFTVYPSPQVSTSVVEPYNSV-LSTHSLLEHTD 199
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 172 bits (419), Expect = 2e-43
Identities = 84/125 (67%), Positives = 93/125 (74%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F + +HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTAKKSKTG 580
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGG G + KKSK G
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 581 VRHLP 595
P
Sbjct: 169 FTVYP 173
Score = 133 bits (321), Expect = 2e-31
Identities = 53/63 (84%), Positives = 60/63 (95%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 258 TYP 266
P
Sbjct: 61 HVP 63
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/57 (54%), Positives = 36/57 (63%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYNFYPHQPTQTLEHSD 678
+GSG SLL+ERLSVDYGK+ P PQVST+VVEPYN LEH+D
Sbjct: 145 TGSGLGSLLLERLSVDYGKKS-KLGFTVYPSPQVSTSVVEPYNSV-LSTHSLLEHTD 199
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 171 bits (417), Expect = 4e-43
Identities = 82/125 (65%), Positives = 93/125 (74%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F + +HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTAKKSKTG 580
T+GKEIVDL LDR+RKLAD CTGLQGFL+F++ GGG G + KKSK G
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 581 VRHLP 595
P
Sbjct: 169 FTIYP 173
Score = 114 bits (275), Expect = 6e-26
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAG
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 258 TYP 266
P
Sbjct: 61 HVP 63
Score = 55.6 bits (128), Expect = 4e-08
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYNFYPHQPTQTLEHSDCA 684
+GSG SLL+ERLSVDYGK+ P PQVSTAVVEPYN LEH+D A
Sbjct: 145 TGSGLGSLLLERLSVDYGKKS-KLGFTIYPSPQVSTAVVEPYNSV-LSTHSLLEHTDVA 201
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 171 bits (417), Expect = 4e-43
Identities = 82/125 (65%), Positives = 93/125 (74%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F + +HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTAKKSKTG 580
T+GKEIVDL LDR+RKLAD CTGLQGFL+F++ GGG G + KKSK G
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 581 VRHLP 595
P
Sbjct: 169 FTIYP 173
Score = 114 bits (275), Expect = 6e-26
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAG
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 258 TYP 266
P
Sbjct: 61 HVP 63
Score = 55.6 bits (128), Expect = 4e-08
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYNFYPHQPTQTLEHSDCA 684
+GSG SLL+ERLSVDYGK+ P PQVSTAVVEPYN LEH+D A
Sbjct: 145 TGSGLGSLLLERLSVDYGKKS-KLGFTIYPSPQVSTAVVEPYNSV-LSTHSLLEHTDVA 201
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 168 bits (409), Expect = 4e-42
Identities = 80/125 (64%), Positives = 92/125 (73%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 400
F F S QHVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 401 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY*WSVSPLTTAKKSKTG 580
T+G+EIVD L+R+RKLAD CTGLQGFL+F++ GGG G + KKSK G
Sbjct: 109 TVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLG 168
Query: 581 VRHLP 595
P
Sbjct: 169 FTIYP 173
Score = 111 bits (266), Expect = 8e-25
Identities = 44/63 (69%), Positives = 53/63 (84%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 258 TYP 266
P
Sbjct: 61 HVP 63
Score = 52.8 bits (121), Expect = 3e-07
Identities = 31/57 (54%), Positives = 36/57 (63%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYNFYPHQPTQTLEHSD 678
+GSG SLL+ERLSVD+GK+ P PQVSTAVVEPYN LEH+D
Sbjct: 145 TGSGLGSLLLERLSVDFGKKS-KLGFTIYPSPQVSTAVVEPYNSV-LSTHSLLEHTD 199
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 108 bits (259), Expect = 5e-24
Identities = 46/89 (51%), Positives = 62/89 (69%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 433
++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 RYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 117
Query: 434 DRIRKLADQCTGLQGFLIFHSFGGGPALG 520
D +RK A+ C LQGF + HS GGG G
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 248
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 249 AGSTYP 266
G P
Sbjct: 56 CGRYVP 61
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYN 636
+GSG +LL+ ++ +Y + + P P+VS VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEYPDRM-MLTFSVFPSPKVSDTVVEPYN 184
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 106 bits (255), Expect = 2e-23
Identities = 46/89 (51%), Positives = 62/89 (69%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 433
++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 RYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 434 DRIRKLADQCTGLQGFLIFHSFGGGPALG 520
D +RK A+ C LQGF + HS GGG G
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYN 636
+GSG +LL+ ++ +Y + + P P+VS VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEYPDRM-MMTFSVFPSPKVSDTVVEPYN 184
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 106 bits (255), Expect = 2e-23
Identities = 45/89 (50%), Positives = 62/89 (69%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 433
++VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 59 RYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 118
Query: 434 DRIRKLADQCTGLQGFLIFHSFGGGPALG 520
D +RK A+ C LQGF + HS GGG G
Sbjct: 119 DVVRKEAENCDCLQGFQVCHSLGGGTGSG 147
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 258 TYP 266
P
Sbjct: 60 YVP 62
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYN 636
+GSG +LL+ ++ +Y + + P P+VS VVEPYN
Sbjct: 144 TGSGMGTLLISKIREEYPDRM-MLTFSVFPSPKVSDTVVEPYN 185
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 105 bits (252), Expect = 4e-23
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +2
Query: 260 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 439
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 440 IRKLADQCTGLQGFLIFHSFGGGPALG 520
+RK A+ C LQGF + HS GGG G
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 258 TYP 266
P
Sbjct: 59 FVP 61
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYN 636
+GSG +LL+ ++ +Y + + P P+VS VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEYPDRM-MLTFSVFPSPKVSDTVVEPYN 184
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 105 bits (251), Expect = 5e-23
Identities = 44/89 (49%), Positives = 62/89 (69%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 433
++VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 59 RYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 118
Query: 434 DRIRKLADQCTGLQGFLIFHSFGGGPALG 520
D +RK A+ C LQGF + HS GGG G
Sbjct: 119 DVVRKEAENCDCLQGFQVCHSLGGGTGSG 147
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 258 TYP 266
P
Sbjct: 60 YVP 62
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYN 636
+GSG +LL+ ++ +Y + + P P+VS VVEPYN
Sbjct: 144 TGSGMGTLLISKIREEYPDRM-MLTFSVFPSPKVSDTVVEPYN 185
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 103 bits (248), Expect = 1e-22
Identities = 44/89 (49%), Positives = 62/89 (69%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 433
++VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 KYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 434 DRIRKLADQCTGLQGFLIFHSFGGGPALG 520
D +RK A+ C LQGF + HS GGG G
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/63 (38%), Positives = 31/63 (49%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYN 636
+GSG +LL+ ++ +Y + + P P+VS VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEYPDRM-MMTFSVFPSPKVSDTVVEPYN 184
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 103 bits (246), Expect = 2e-22
Identities = 45/87 (51%), Positives = 59/87 (67%)
Frame = +2
Query: 260 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 439
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 440 IRKLADQCTGLQGFLIFHSFGGGPALG 520
+RK A+ C LQGF + HS GGG G
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 258 TYP 266
P
Sbjct: 59 FVP 61
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYN 636
+GSG +LL+ ++ +Y + + P P+VS VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEYPDRM-MLTFSVFPSPKVSDTVVEPYN 184
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 103 bits (246), Expect = 2e-22
Identities = 45/87 (51%), Positives = 59/87 (67%)
Frame = +2
Query: 260 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 439
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 440 IRKLADQCTGLQGFLIFHSFGGGPALG 520
+RK A+ C LQGF + HS GGG G
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 258 TYP 266
P
Sbjct: 59 FVP 61
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYN 636
+GSG +LL+ ++ +Y + + P P+VS VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEYPDRM-MLTFSVFPSPKVSDTVVEPYN 184
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 99 bits (238), Expect = 2e-21
Identities = 43/89 (48%), Positives = 61/89 (68%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 433
++VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 KYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 434 DRIRKLADQCTGLQGFLIFHSFGGGPALG 520
D +RK A+ LQGF + HS GGG G
Sbjct: 118 DVVRKEAENSDCLQGFQVCHSLGGGTGSG 146
Score = 44.8 bits (101), Expect = 8e-05
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYN 636
+GSG +LL+ ++ +Y + + P P+VS VVEPYN
Sbjct: 143 TGSGMGTLLISKIREEYPDRM-MMTFSVFPSPKVSDTVVEPYN 184
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Frame = +2
Query: 230 FLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 403
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ 110
Query: 404 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY 532
GK + + ++D I + AD L+GF++ HS GG G Y
Sbjct: 111 -GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSY 152
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +3
Query: 81 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 236
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
Score = 33.5 bits (73), Expect = 0.19
Identities = 27/89 (30%), Positives = 39/89 (43%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYNFYPHQPTQTLEHSDCAF 687
+GSG S L+E L+ Y K++ S + + S VV+PYN TL ++DC
Sbjct: 145 TGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTL-NADCVV 203
Query: 688 HGSTMKPSMTSGRRNLRHLSGPNLTQTES 774
+ R HL+ P QT S
Sbjct: 204 VLDNTALGRIAVER--LHLTNPTFAQTNS 230
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 70.1 bits (164), Expect = 2e-12
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Frame = +2
Query: 230 FLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 403
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ 110
Query: 404 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSLPY 532
GK + + ++D I + AD L+GF++ HS GG G Y
Sbjct: 111 -GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSY 152
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +3
Query: 81 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 236
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
Score = 33.9 bits (74), Expect = 0.14
Identities = 27/89 (30%), Positives = 40/89 (44%)
Frame = +1
Query: 508 SGSGFTSLLMERLSVDYGKEV*NWSSPSTPRPQVSTAVVEPYNFYPHQPTQTLEHSDCAF 687
+GSG S L+E L+ Y K++ S + + S VV+PYN TL ++DC
Sbjct: 145 TGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTL-NADCVV 203
Query: 688 HGSTMKPSMTSGRRNLRHLSGPNLTQTES 774
+ + R HL+ P QT S
Sbjct: 204 VLDNTALNRIAVER--LHLTNPTFAQTNS 230
>At4g38980.1 68417.m05523 expressed protein
Length = 280
Score = 32.3 bits (70), Expect = 0.44
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Frame = -1
Query: 499 EGVEDQESLQTGTLVSELADSVQNQIY--DFLS----NXXXXXXXXXGRIFLTSNKLFWM 338
E +E+ S+ G E SV +Q++ DF+S + + +TS ++F +
Sbjct: 156 ESIEEDGSVSNGEAKEEKPASVSSQVFKDDFMSTYVEDNAEDCNVTEDPVKVTSQEIFKV 215
Query: 337 KQLSVCASAD----LINNSRFKIDEDSTGYVLPAPVSLKKVLKESS 212
L V D L+ + +DE ST LP P++ +V+ E S
Sbjct: 216 WDLEVVGDNDEEDGLVLQLKKALDESSTVQPLPQPLNDDQVVSEKS 261
>At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 601 PQVSTAVVEPYNFYPHQPTQTLEHSDCAFHGSTMKPSMTSGRRNLRHLSGPNLTQTE 771
PQ + + P N PH P++T E S + S PS + G +GP+++ E
Sbjct: 451 PQPNPTWIPPQNAPPHNPSRTSELSPWSLFPSIESPSASHGGPLPLLPAGPSVSSNE 507
>At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 601 PQVSTAVVEPYNFYPHQPTQTLEHSDCAFHGSTMKPSMTSGRRNLRHLSGPNLTQTE 771
PQ + + P N PH P++T E S + S PS + G +GP+++ E
Sbjct: 451 PQPNPTWIPPQNAPPHNPSRTSELSPWSLFPSIESPSASHGGPLPLLPAGPSVSSNE 507
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 247 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 122
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At3g06140.1 68416.m00705 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 359
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 553 DYGKEV*NWSSPSTPRPQVSTAVVEPYNFYPHQPTQTLEHSDCAFHGSTMKPS 711
DY + S P P+PQ+++ Y+++P QP Q + + G M+P+
Sbjct: 46 DYNYSNYHLSPPLPPQPQINSCSYGHYHYHP-QPPQYFTTAQPNWWGPMMRPA 97
>At4g18120.1 68417.m02694 RNA recognition motif (RRM)-containing
protein Mei2-like protein, Arabidopsis thaliana,
gb:D86122
Length = 785
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +1
Query: 628 PYNFYPHQPTQTLEHSDCAFHGSTMKPSMTSGRRNLRHLSGPNLTQTESSQSGQ 789
P F+P P +T AF G++ + +RNLR S PN + + Q
Sbjct: 477 PSGFFPRSP-ETSSMGSVAFRGAS---GNMNAQRNLRETSSPNFKMLSAPRRSQ 526
>At5g42640.1 68418.m05191 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 300
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 628 PYNF-YPHQPTQTLEHSDCAFHGSTMKPSMTSGRRNLRHLSGP-NLTQTESSQSGQD 792
P N +PHQ + +H D F S G R+L+ +S P NL + +S Q+
Sbjct: 164 PLNIVFPHQDSADRQHLDIIFSSSKHNHVFQDG-RSLKKISEPTNLFEKSNSYDSQE 219
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 583 SPSTPRPQVSTAVVEPYNFYPHQPT-QTLEHSDCAFHGSTMKPSMTSGRRNLRHLSGPNL 759
+PS P P+ ST V P P P+ Q+ E G+ + T+G N R S P+
Sbjct: 89 NPSPPAPEGSTPVTPPAP--PQTPSNQSPERPTPPSPGANDDRNRTNGGNNNRDGSTPSP 146
Query: 760 TQTESSQSGQDLSP 801
+ + SG SP
Sbjct: 147 PSSGNRTSGDGGSP 160
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,439,562
Number of Sequences: 28952
Number of extensions: 512902
Number of successful extensions: 1531
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2048424000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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