Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31027
         (868 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   7.2  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   9.5  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   9.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 98   NQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEA 220
            N+I  + W +  D  G     AYHGD  +  E I    ++A
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 497 ILDPVPPPRECVSWKP 450
           I++PVP P E V+ KP
Sbjct: 389 IVEPVPQPVEEVTQKP 404


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -1

Query: 496 YWTRCRHRGNV*VGSPVGNRKILILCGLHRGPS 398
           +W  C+  G+  +   V N    + C  H+G S
Sbjct: 60  WWEFCQRNGHNCLDFTVQNILTFLSCRFHQGAS 92


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 770 VSTLALRFPGSVERLIFKKNW 832
           +S   L F GS++ +I  K+W
Sbjct: 119 MSFYVLNFFGSIQFIIISKHW 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,815
Number of Sequences: 336
Number of extensions: 4582
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)