Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31027
(868 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 181 6e-46
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 181 6e-46
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 181 6e-46
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 180 8e-46
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 179 2e-45
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 178 3e-45
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 177 6e-45
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 177 6e-45
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 177 1e-44
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 96 2e-20
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 96 2e-20
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 96 3e-20
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 96 3e-20
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 96 3e-20
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 96 3e-20
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 95 7e-20
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 63 3e-10
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 63 3e-10
At4g37190.1 68417.m05265 expressed protein 30 2.3
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 3.0
At2g28400.1 68415.m03451 expressed protein contains Pfam profile... 29 5.3
At1g01340.1 68414.m00049 cyclic nucleotide-regulated ion channel... 29 5.3
At5g49030.1 68418.m06067 tRNA synthetase class I (I, L, M and V)... 28 9.3
At2g24200.1 68415.m02891 cytosol aminopeptidase identical to cyt... 28 9.3
At1g77300.1 68414.m09002 SET domain-containing protein similar t... 28 9.3
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 181 bits (440), Expect = 6e-46
Identities = 88/128 (68%), Positives = 94/128 (73%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 435
DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 436 CDCLQGFQXXXXXXXXXXXXXXXXPSQRSVKSTPTES*THTQ*SPRPKVSDTVVEPYNAT 615
CDCLQGFQ + + P P PKVSDTVVEPYNAT
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186
Query: 616 LSVHQLVE 639
LSVHQLVE
Sbjct: 187 LSVHQLVE 194
Score = 118 bits (283), Expect = 7e-27
Identities = 49/70 (70%), Positives = 59/70 (84%)
Frame = +2
Query: 59 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 238
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 239 PRAILATWSP 268
PRA+L P
Sbjct: 61 PRAVLMDLEP 70
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 181 bits (440), Expect = 6e-46
Identities = 88/128 (68%), Positives = 94/128 (73%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 435
DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 436 CDCLQGFQXXXXXXXXXXXXXXXXPSQRSVKSTPTES*THTQ*SPRPKVSDTVVEPYNAT 615
CDCLQGFQ + + P P PKVSDTVVEPYNAT
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNAT 186
Query: 616 LSVHQLVE 639
LSVHQLVE
Sbjct: 187 LSVHQLVE 194
Score = 120 bits (290), Expect = 9e-28
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +2
Query: 59 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 238
MREI+H+Q GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 239 PRAILATWSP 268
PRA+L P
Sbjct: 61 PRAVLMDLEP 70
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 181 bits (440), Expect = 6e-46
Identities = 88/128 (68%), Positives = 94/128 (73%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 435
DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 436 CDCLQGFQXXXXXXXXXXXXXXXXPSQRSVKSTPTES*THTQ*SPRPKVSDTVVEPYNAT 615
CDCLQGFQ + + P P PKVSDTVVEPYNAT
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNAT 186
Query: 616 LSVHQLVE 639
LSVHQLVE
Sbjct: 187 LSVHQLVE 194
Score = 118 bits (284), Expect = 5e-27
Identities = 50/70 (71%), Positives = 60/70 (85%)
Frame = +2
Query: 59 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 238
MREI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 239 PRAILATWSP 268
PRA+L P
Sbjct: 61 PRAVLMDLEP 70
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 180 bits (439), Expect = 8e-46
Identities = 87/128 (67%), Positives = 94/128 (73%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 435
DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+
Sbjct: 68 DLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAEN 127
Query: 436 CDCLQGFQXXXXXXXXXXXXXXXXPSQRSVKSTPTES*THTQ*SPRPKVSDTVVEPYNAT 615
CDCLQGFQ + + P P PKVSDTVVEPYNAT
Sbjct: 128 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 187
Query: 616 LSVHQLVE 639
LSVHQLVE
Sbjct: 188 LSVHQLVE 195
Score = 122 bits (295), Expect = 2e-28
Identities = 54/71 (76%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Frame = +2
Query: 59 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 235
MREI+H+Q GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 236 VPRAILATWSP 268
VPRA+L P
Sbjct: 61 VPRAVLMDLEP 71
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 179 bits (436), Expect = 2e-45
Identities = 86/128 (67%), Positives = 94/128 (73%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 435
DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+
Sbjct: 68 DLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAEN 127
Query: 436 CDCLQGFQXXXXXXXXXXXXXXXXPSQRSVKSTPTES*THTQ*SPRPKVSDTVVEPYNAT 615
CDCLQGFQ + + P P PKVSDTVVEPYNAT
Sbjct: 128 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 187
Query: 616 LSVHQLVE 639
LSVHQLVE
Sbjct: 188 LSVHQLVE 195
Score = 127 bits (306), Expect = 1e-29
Identities = 55/71 (77%), Positives = 63/71 (88%), Gaps = 1/71 (1%)
Frame = +2
Query: 59 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 235
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 236 VPRAILATWSP 268
VPRA+L P
Sbjct: 61 VPRAVLMDLEP 71
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 178 bits (434), Expect = 3e-45
Identities = 86/128 (67%), Positives = 94/128 (73%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 435
DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+
Sbjct: 67 DLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAEN 126
Query: 436 CDCLQGFQXXXXXXXXXXXXXXXXPSQRSVKSTPTES*THTQ*SPRPKVSDTVVEPYNAT 615
CDCLQGFQ + + P P PKVSDTVVEPYNAT
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186
Query: 616 LSVHQLVE 639
LSVHQLVE
Sbjct: 187 LSVHQLVE 194
Score = 124 bits (300), Expect = 6e-29
Identities = 53/70 (75%), Positives = 61/70 (87%)
Frame = +2
Query: 59 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 238
MREI+H+Q GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 239 PRAILATWSP 268
PRAIL P
Sbjct: 61 PRAILMDLEP 70
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 177 bits (432), Expect = 6e-45
Identities = 86/128 (67%), Positives = 93/128 (72%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 435
DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 436 CDCLQGFQXXXXXXXXXXXXXXXXPSQRSVKSTPTES*THTQ*SPRPKVSDTVVEPYNAT 615
CDCLQGFQ + + P P PKVSDTVVEPYNAT
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186
Query: 616 LSVHQLVE 639
LSVHQLVE
Sbjct: 187 LSVHQLVE 194
Score = 123 bits (297), Expect = 1e-28
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +2
Query: 59 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 238
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 239 PRAILATWSP 268
PRA+L P
Sbjct: 61 PRAVLMDLEP 70
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 177 bits (432), Expect = 6e-45
Identities = 86/128 (67%), Positives = 93/128 (72%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 435
DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 436 CDCLQGFQXXXXXXXXXXXXXXXXPSQRSVKSTPTES*THTQ*SPRPKVSDTVVEPYNAT 615
CDCLQGFQ + + P P PKVSDTVVEPYNAT
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT 186
Query: 616 LSVHQLVE 639
LSVHQLVE
Sbjct: 187 LSVHQLVE 194
Score = 123 bits (297), Expect = 1e-28
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +2
Query: 59 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 238
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 239 PRAILATWSP 268
PRA+L P
Sbjct: 61 PRAVLMDLEP 70
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 177 bits (430), Expect = 1e-44
Identities = 87/128 (67%), Positives = 93/128 (72%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 435
DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 436 CDCLQGFQXXXXXXXXXXXXXXXXPSQRSVKSTPTES*THTQ*SPRPKVSDTVVEPYNAT 615
DCLQGFQ + + P P PKVSDTVVEPYNAT
Sbjct: 127 SDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNAT 186
Query: 616 LSVHQLVE 639
LSVHQLVE
Sbjct: 187 LSVHQLVE 194
Score = 123 bits (296), Expect = 2e-28
Identities = 54/70 (77%), Positives = 60/70 (85%)
Frame = +2
Query: 59 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 238
MREI+H+Q GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 239 PRAILATWSP 268
PRA+L P
Sbjct: 61 PRAVLMDLEP 70
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 96.3 bits (229), Expect = 2e-20
Identities = 51/128 (39%), Positives = 69/128 (53%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 435
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADN 128
Query: 436 CDCLQGFQXXXXXXXXXXXXXXXXPSQRSVKSTPTES*THTQ*SPRPKVSDTVVEPYNAT 615
C LQGF +R +S P P+VS VVEPYN+
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSV 188
Query: 616 LSVHQLVE 639
LS H L+E
Sbjct: 189 LSTHSLLE 196
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 59 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 232
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 233 YVPRAILATWSP 268
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 96.3 bits (229), Expect = 2e-20
Identities = 51/128 (39%), Positives = 69/128 (53%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 435
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADN 128
Query: 436 CDCLQGFQXXXXXXXXXXXXXXXXPSQRSVKSTPTES*THTQ*SPRPKVSDTVVEPYNAT 615
C LQGF +R +S P P+VS VVEPYN+
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSV 188
Query: 616 LSVHQLVE 639
LS H L+E
Sbjct: 189 LSTHSLLE 196
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 59 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 232
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 233 YVPRAILATWSP 268
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 95.9 bits (228), Expect = 3e-20
Identities = 50/128 (39%), Positives = 70/128 (54%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 435
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 436 CDCLQGFQXXXXXXXXXXXXXXXXPSQRSVKSTPTES*THTQ*SPRPKVSDTVVEPYNAT 615
C LQGF +R +S P P+VS +VVEPYN+
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Query: 616 LSVHQLVE 639
LS H L+E
Sbjct: 189 LSTHSLLE 196
Score = 58.4 bits (135), Expect = 6e-09
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 59 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 232
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 233 YVPRAILATWSP 268
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 95.9 bits (228), Expect = 3e-20
Identities = 50/128 (39%), Positives = 70/128 (54%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 435
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 436 CDCLQGFQXXXXXXXXXXXXXXXXPSQRSVKSTPTES*THTQ*SPRPKVSDTVVEPYNAT 615
C LQGF +R +S P P+VS +VVEPYN+
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Query: 616 LSVHQLVE 639
LS H L+E
Sbjct: 189 LSTHSLLE 196
Score = 58.4 bits (135), Expect = 6e-09
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 59 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 232
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 233 YVPRAILATWSP 268
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 95.9 bits (228), Expect = 3e-20
Identities = 50/128 (39%), Positives = 70/128 (54%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 435
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 436 CDCLQGFQXXXXXXXXXXXXXXXXPSQRSVKSTPTES*THTQ*SPRPKVSDTVVEPYNAT 615
C LQGF +R +S P P+VS +VVEPYN+
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Query: 616 LSVHQLVE 639
LS H L+E
Sbjct: 189 LSTHSLLE 196
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 59 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 232
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 233 YVPRAILATWSP 268
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 95.9 bits (228), Expect = 3e-20
Identities = 50/128 (39%), Positives = 70/128 (54%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 435
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 436 CDCLQGFQXXXXXXXXXXXXXXXXPSQRSVKSTPTES*THTQ*SPRPKVSDTVVEPYNAT 615
C LQGF +R +S P P+VS +VVEPYN+
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Query: 616 LSVHQLVE 639
LS H L+E
Sbjct: 189 LSTHSLLE 196
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 59 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 232
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 233 YVPRAILATWSP 268
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 94.7 bits (225), Expect = 7e-20
Identities = 49/128 (38%), Positives = 70/128 (54%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 435
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +RK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADN 128
Query: 436 CDCLQGFQXXXXXXXXXXXXXXXXPSQRSVKSTPTES*THTQ*SPRPKVSDTVVEPYNAT 615
C LQGF +R +S P P+VS VVEPYN+
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSV 188
Query: 616 LSVHQLVE 639
LS H L+E
Sbjct: 189 LSTHSLLE 196
Score = 61.3 bits (142), Expect = 8e-10
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 59 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 232
MREI+ + GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 233 YVPRAILATWSP 268
+VPRA+ P
Sbjct: 61 HVPRAVFLDLEP 72
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.9 bits (146), Expect = 3e-10
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = +2
Query: 62 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 241
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 242 RAILATWSP 268
RA+L P
Sbjct: 63 RALLIDLEP 71
Score = 55.6 bits (128), Expect = 4e-08
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKES 429
DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +E+
Sbjct: 68 DLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREA 126
Query: 430 ESCDCLQGFQXXXXXXXXXXXXXXXXPSQR-SVKSTPTES*THTQ*SPRPKVSDTVVEPY 606
+ D L+GF + + + + T++ + + SD VV+PY
Sbjct: 127 DGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPY 186
Query: 607 NATLSVHQL 633
N+ L++ +L
Sbjct: 187 NSLLTLKRL 195
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.9 bits (146), Expect = 3e-10
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = +2
Query: 62 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 241
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 242 RAILATWSP 268
RA+L P
Sbjct: 63 RALLIDLEP 71
Score = 55.2 bits (127), Expect = 5e-08
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Frame = +1
Query: 256 DLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKES 429
DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +E+
Sbjct: 68 DLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDREA 126
Query: 430 ESCDCLQGFQXXXXXXXXXXXXXXXXPSQR-SVKSTPTES*THTQ*SPRPKVSDTVVEPY 606
+ D L+GF + + + + T++ + + SD VV+PY
Sbjct: 127 DGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPY 186
Query: 607 NATLSVHQL 633
N+ L++ +L
Sbjct: 187 NSLLTLKRL 195
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 59 MREIVHLQAGQCGNQIGAKFWEIISDEHGI 148
MREIV +Q G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +1
Query: 391 LVDSVLDVVRKESESCDCLQGF 456
+++SV VVRKE+E+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At2g28400.1 68415.m03451 expressed protein contains Pfam profile
PF04520: Protein of unknown function, DUF584
Length = 162
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 58 NEGNRSSTGRPMW*PDWS*VLGDHLRRAR 144
++ ++++ P+ PDWS +LGD RR R
Sbjct: 68 SDSGKAASSLPVNVPDWSKILGDESRRQR 96
>At1g01340.1 68414.m00049 cyclic nucleotide-regulated ion channel
(CNGC10) (ACBK1) almost identical to CaM-regulated
potassium ion channel (ACBK1) GI:8515883 from
[Arabidopsis thaliana]; contains Pfam domain, PF00520:
Ion transport protein
Length = 706
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 647 DENYCIDNE-GSIRHLLPQLLKLFHNPPYGDL*PLSFPSH 763
DE + +E G R P L ++F N +G PLSFPSH
Sbjct: 8 DEGKPLSSEYGYGRKARPSLDRVFKNVKWGFKKPLSFPSH 47
>At5g49030.1 68418.m06067 tRNA synthetase class I (I, L, M and V)
family protein similar to SP|P41972 Isoleucyl-tRNA
synthetase (EC 6.1.1.5) (Isoleucine--tRNA ligase)
(IleRS) {Staphylococcus aureus}; contains Pfam profile
PF00133: tRNA synthetases class I (I, L, M and V)
Length = 1093
Score = 27.9 bits (59), Expect = 9.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 230 KYVPRAILATWSPAPWTLSA 289
+++P LA W+ PWT+ A
Sbjct: 326 EFIPNIYLAVWTTTPWTMPA 345
>At2g24200.1 68415.m02891 cytosol aminopeptidase identical to
cytosol aminopeptidase SP:P30184 from [Arabidopsis
thaliana]; contains Pfam profiles: PF00883 cytosol
aminopeptidase family catalytic domain, PF02789: cytosol
aminopeptidase family N-terminal domain
Length = 520
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -2
Query: 405 DRVNELSTL---CVVSLGPVVAGAGLSEDEVVR-TEDLSERSG 289
D++ +L+TL CV++LG +AG DE+ + SERSG
Sbjct: 393 DKIVDLATLTGACVIALGTSMAGIYTPSDELAKEVIAASERSG 435
>At1g77300.1 68414.m09002 SET domain-containing protein similar to
huntingtin interacting protein 1 [Homo sapiens]
GI:12697196; contains Pfam profile PF00856: SET domain
Length = 1759
Score = 27.9 bits (59), Expect = 9.3
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = +2
Query: 497 WAPSHLKDP*RVPRQNHEHILSSPLAQKYQ 586
W P H + P R+ R+ + SP+ ++++
Sbjct: 1481 WIPKHFRKPWRINREERSESMRSPINRRFR 1510
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,326,053
Number of Sequences: 28952
Number of extensions: 422738
Number of successful extensions: 1164
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2028915200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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