Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31026
         (851 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.8  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   3.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   3.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   3.1  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   3.1  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   4.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.4  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   9.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   9.4  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   9.4  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 7/37 (18%)
 Frame = -1

Query: 785 SRLKPNSVGV----RLGR---FIVEITPADVIRWLHC 696
           S+LKP+ V V     LGR   FIV++  A+ + W+ C
Sbjct: 98  SQLKPDKVTVFCNRDLGREKQFIVKLPSAERVAWMWC 134


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 7/37 (18%)
 Frame = -1

Query: 785 SRLKPNSVGV----RLGR---FIVEITPADVIRWLHC 696
           S+LKP+ V V     LGR   FIV++  A+ + W+ C
Sbjct: 98  SQLKPDKVTVFCNRDLGREKQFIVKLPSAERVAWMWC 134


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 7/37 (18%)
 Frame = -1

Query: 785 SRLKPNSVGV----RLGR---FIVEITPADVIRWLHC 696
           S+LKP+ V V     LGR   FIV++  A+ + W+ C
Sbjct: 98  SQLKPDKVTVFCNRDLGREKQFIVKLPSAERVAWMWC 134


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 7/37 (18%)
 Frame = -1

Query: 785 SRLKPNSVGV----RLGR---FIVEITPADVIRWLHC 696
           S+LKP+ V V     LGR   FIV++  A+ + W+ C
Sbjct: 98  SQLKPDKVTVFCNRDLGREKQFIVKLPSAERVAWMWC 134


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +2

Query: 191 HRQDHRGWRRFFQHFLQRDRSCKHVPR 271
           +R++ +GW+   +H L  ++    VPR
Sbjct: 120 YRENKQGWQNSIRHNLSLNKCFVKVPR 146


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -1

Query: 458 QRACGFCPKPNLRFPFQWCSDHGHSCW 378
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 746 GPT*HQLNSASIGTRIVSPRINCF 817
           GPT    ++    T ++SP INC+
Sbjct: 301 GPTYSTWSTVQTPTTVMSPTINCW 324


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +2

Query: 542 SVSPLTTARSLNWSSPSTPRLQVSTAVVEPYNSI-FTNHTNPLSTLTVA 685
           S+   T  +  +W S S P L  + +    YN+  + ++ + LS+ T++
Sbjct: 223 SIDSFTLEQHRSWCSSSQPVLSTTNSTTNCYNNYPYYSNMDYLSSSTMS 271


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +2

Query: 383 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 472
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 545 VSPLTTARSLNWSSPSTPRLQVSTAVVEPY 634
           +S LT+   +   SPST     S +V  PY
Sbjct: 690 LSSLTSPGGMVLPSPSTSVASPSVSVASPY 719


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 545 VSPLTTARSLNWSSPSTPRLQVSTAVVEPY 634
           +S LT+   +   SPST     S +V  PY
Sbjct: 582 LSSLTSPGGMVLPSPSTSVASPSVSVASPY 611


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = -3

Query: 591 DGELQFRLLAVVNGETLHQ*GSEPRAGTPPKEWKIRNPCRPVHWSASLRILSK 433
           +G+L  ++   +NGE        P A  P    + + P  P  W+     LS+
Sbjct: 8   EGKLLGKISTNINGEEFCSFQGVPYAQPPIGHLRFKAPQAPQPWTGIRDALSE 60


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = -3

Query: 591 DGELQFRLLAVVNGETLHQ*GSEPRAGTPPKEWKIRNPCRPVHWSASLRILSK 433
           +G+L  ++   +NGE        P A  P    + + P  P  W+     LS+
Sbjct: 8   EGKLLGKISTNINGEEFCSFQGVPYAQPPIGHLRFKAPQAPQPWTGIRDALSE 60


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = -3

Query: 591 DGELQFRLLAVVNGETLHQ*GSEPRAGTPPKEWKIRNPCRPVHWSASLRILSK 433
           +G+L  ++   +NGE        P A  P    + + P  P  W+     LS+
Sbjct: 10  EGKLLGKISTNINGEEFCSFQGVPYAQPPIGHLRFKAPQAPQPWTGIRDALSE 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,770
Number of Sequences: 336
Number of extensions: 4951
Number of successful extensions: 26
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)