Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31024
         (860 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    26   1.7  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    25   3.9  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    24   5.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.0  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = -3

Query: 729 LKGMW-PRLVTNPHYRTFWKP 670
           + G W P ++ NP Y+  WKP
Sbjct: 254 MDGEWEPPMIDNPEYKGEWKP 274


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -1

Query: 710 GWLRTLTIEHSGSPL-VSIGTPHQFFGIWYIWCP 612
           G+  T+ +E+  S   VS GT H FF ++ I+ P
Sbjct: 373 GYNATVLMENMQSAYRVSKGTQHDFFSVFSIFFP 406


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +3

Query: 414 SAEYGCKPIEGMLSHQLKQFRIDGEKSIIQNPQKHSVKNMKKQH 545
           S  +  +P+ GML  Q +Q R   ++  +   Q+   +  ++QH
Sbjct: 60  SGTHSDRPVAGMLQQQQQQQR-QPQRQAVVGTQQQQQRRQQQQH 102


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -3

Query: 678  WKPFSFNWYTSSVFWYMVHLVSISRPTASPVDIRTSIAY 562
            W P  +NW + S++  M+         + P ++  SIAY
Sbjct: 2751 WNPLEWNWKSKSLWLGMIG--GALTGLSIPFNLTASIAY 2787


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 960,556
Number of Sequences: 2352
Number of extensions: 20648
Number of successful extensions: 84
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)