Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31023
         (812 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical pr...   113   1e-25
Z54236-2|CAE46661.1|  313|Caenorhabditis elegans Hypothetical pr...    50   1e-06
Z54236-1|CAA90979.2|  312|Caenorhabditis elegans Hypothetical pr...    50   1e-06
AF321546-1|AAG42102.1|  312|Caenorhabditis elegans suppressor of...    50   1e-06
U50069-2|AAB37558.1|  328|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical pr...    29   5.2  
U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin recepto...    28   6.9  

>U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical
           protein D2096.8 protein.
          Length = 316

 Score =  113 bits (273), Expect = 1e-25
 Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
 Frame = +1

Query: 184 YRASNGS-QCKGYPRLLVQHIQECLMLSEMMQEHDEPILKCLQDIKVQMHEDPISFTLEF 360
           Y+A+      KG     +  ++   +++E ++EHD PIL  L D+     +DP  F +EF
Sbjct: 101 YKAAEADPSAKGIKDFWLTALRTHDLVAEAIEEHDVPILSYLTDVTTAASKDPAGFKIEF 160

Query: 361 YFAPNEYFTNTVLTKEYLMKCKPDEESPLEFEGPEIYSCKGCEINWNAGKT*LXXXXXXX 540
           +FA N YF N VLTK YL+   PD E+PL+F+GP +    G  I W  GK  +       
Sbjct: 161 HFATNPYFKNQVLTKTYLLGFDPDAEAPLQFDGPHVIRAVGDTIEWEDGKN-VTKKAVKK 219

Query: 541 XXXXXVGQFRTVTKSVQADSFFNFFNPPTLPEDPNSTVASD-VQALLTADFEI 696
                    + +TK+V+ADSFFNFF PP   ++ N     +  +  L  D+E+
Sbjct: 220 KQKKGANAGKFLTKTVKADSFFNFFEPPKSKDERNEDEDDEQAEEFLELDYEM 272


>Z54236-2|CAE46661.1|  313|Caenorhabditis elegans Hypothetical
           protein C27B7.1b protein.
          Length = 313

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = +1

Query: 256 MLSEMMQEHDEPILKCLQDIKVQMHEDPIS-FTLEFYFAPNEYFTNTVLTKEYLMKCKPD 432
           +LS  + E  E +L  L+D++VQ  ED  S F +   F PNEYFTN V+TK Y ++ +  
Sbjct: 90  LLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNEVITKSYHLQSESP 149

Query: 433 EESPLEFEGPE 465
                E E  E
Sbjct: 150 STEITEIEWKE 160


>Z54236-1|CAA90979.2|  312|Caenorhabditis elegans Hypothetical
           protein C27B7.1a protein.
          Length = 312

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = +1

Query: 256 MLSEMMQEHDEPILKCLQDIKVQMHEDPIS-FTLEFYFAPNEYFTNTVLTKEYLMKCKPD 432
           +LS  + E  E +L  L+D++VQ  ED  S F +   F PNEYFTN V+TK Y ++ +  
Sbjct: 90  LLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNEVITKSYHLQSESP 149

Query: 433 EESPLEFEGPE 465
                E E  E
Sbjct: 150 STEITEIEWKE 160


>AF321546-1|AAG42102.1|  312|Caenorhabditis elegans suppressor of
           presenilin 2 protein.
          Length = 312

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = +1

Query: 256 MLSEMMQEHDEPILKCLQDIKVQMHEDPIS-FTLEFYFAPNEYFTNTVLTKEYLMKCKPD 432
           +LS  + E  E +L  L+D++VQ  ED  S F +   F PNEYFTN V+TK Y ++ +  
Sbjct: 90  LLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNEVITKSYHLQSESP 149

Query: 433 EESPLEFEGPE 465
                E E  E
Sbjct: 150 STEITEIEWKE 160


>U50069-2|AAB37558.1|  328|Caenorhabditis elegans Hypothetical
           protein C09B9.2 protein.
          Length = 328

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = -1

Query: 422 HFIKYSLVSTVFVKYSFGAK*NSKVKLMGSSCICTLISCKHFRI 291
           HF+   L+ + F++ SF +K     ++ G S + ++ +C HF I
Sbjct: 134 HFVLLFLMFSFFLQSSFSSKSRFVEQIFGMSAVSSMSTCAHFII 177


>Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical
           protein T14B1.1 protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 89  NPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPMD 202
           +P RD+  EE LA+ ++  A   GE+++ +   EP  D
Sbjct: 6   DPGRDEEVEEPLAKKIRVVAQEAGEDEESEMEKEPNAD 43


>U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin receptor
           substrate homologprotein 1 protein.
          Length = 1003

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 427 PDEESPLEFEGPEIYSCKGCEINW 498
           P +E P EF  PE+Y C  C + +
Sbjct: 95  PKDEDPDEFGIPEVYKCGNCLVGF 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,929,908
Number of Sequences: 27780
Number of extensions: 344373
Number of successful extensions: 1173
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)