Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31022
         (890 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    25   1.1  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   3.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   7.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   7.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.8  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 235 TTKTIC*TKLETDLDSKPSSTPVAVKR 315
           TT+T   TK  T   +KP++ PV V +
Sbjct: 168 TTRTTLTTKFTTKPSTKPTNKPVVVTK 194


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +1

Query: 706 LPNDRPLPVPPNL-PGLANPWGLAPSS 783
           LP   PLP+PP   P + NP  +  S+
Sbjct: 177 LPQVPPLPLPPIFPPTMINPSAICESA 203


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 426 VFCRTRGTCFQWIYAFS 376
           VFCR R   + + YAFS
Sbjct: 112 VFCRDRVNPYLFYYAFS 128


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = -1

Query: 335 AIDGLFGLLTATGVEEGLESRSVSNLV*QIVFVVTTW 225
           AI  +F  +  T +    +S ++  +  +++F+VT W
Sbjct: 57  AIYHIFMHIVPTKLISFYKSTAILEIAFEVIFIVTVW 93


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -1

Query: 353 EEELFDAIDGLFG 315
           +E+L+DAI+ L+G
Sbjct: 337 KEKLYDAIEALYG 349


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,454
Number of Sequences: 336
Number of extensions: 4444
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)