Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31022
         (890 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      64   2e-12
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          56   4e-10
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              25   0.70 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   2.1  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   8.6  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   8.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   8.6  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   8.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   8.6  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 64.1 bits (149), Expect = 2e-12
 Identities = 28/52 (53%), Positives = 39/52 (75%)
 Frame = +2

Query: 8   PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLT 163
           P +HP++ L+DV+ S L  L++F+Y GEVNV Q  L+SF+ TAE L+V GLT
Sbjct: 65  PCKHPVIVLQDVAFSDLHALVEFIYHGEVNVHQRSLSSFLKTAEVLRVSGLT 116


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 56.0 bits (129), Expect = 4e-10
 Identities = 23/53 (43%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
 Frame = +2

Query: 5   NPTQHPIVFL-KDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 160
           NP +HP + + +DV  + L+ +++F+Y+GE++V Q EL S + TA+QL++KGL
Sbjct: 68  NPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGL 120


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 65  LLQFMYQGEVNVKQEELASFIS-TAEQLQVKGLTGNQNEE 181
           ++  +Y G VNV+ E + S++    ++  V    GN NE+
Sbjct: 43  IIDEVYNGNVNVEDENVQSYVECMMKKFNVVDENGNFNEK 82


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 183 LSSF*LPVKPLT*SCSAVLINDANSSCLTLTSP 85
           LSS      P+T + S ++ N  NS+C    SP
Sbjct: 323 LSSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSP 355


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 797 HWRHSELGARPQGLANPGRFG 735
           H RH+++  RP  L N  ++G
Sbjct: 221 HLRHTKIWLRPDWLFNLTKYG 241


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 13/53 (24%), Positives = 21/53 (39%)
 Frame = -1

Query: 491 NSGSILGATALFSSSSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDA 333
           N  + +  TA +   + +  N +       ASSG       GP  + +E  DA
Sbjct: 133 NYSAFVNLTAYYDGGANLNLNGTVNCTSSIASSGVVSAGECGPAADVDEKTDA 185


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 700 VHLPNDRPLPVPP 738
           +H P+ + LPVPP
Sbjct: 134 LHRPDTKDLPVPP 146


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 803 LQHWRHSELGARPQGLANPGRFGGTGNGL 717
           L  W   +   R +G  +PG  GG  NGL
Sbjct: 129 LNIWVPQKYRLRHKGDGSPGGNGGPRNGL 157


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 803 LQHWRHSELGARPQGLANPGRFGGTGNGL 717
           L  W   +   R +G  +PG  GG  NGL
Sbjct: 129 LNIWVPQKYRLRHKGDGSPGGNGGPRNGL 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,453
Number of Sequences: 438
Number of extensions: 5547
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)