Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31021
         (724 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1K2A6 Cluster: Putative uncharacterized protein; n=1; ...    38   0.19 
UniRef50_UPI0000D55AA9 Cluster: PREDICTED: similar to CG2101-PA;...    33   5.4  
UniRef50_Q5WQW3 Cluster: Cap6p; n=4; Filobasidiella neoformans|R...    33   7.1  

>UniRef50_Q1K2A6 Cluster: Putative uncharacterized protein; n=1;
           Desulfuromonas acetoxidans DSM 684|Rep: Putative
           uncharacterized protein - Desulfuromonas acetoxidans DSM
           684
          Length = 319

 Score = 38.3 bits (85), Expect = 0.19
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = -1

Query: 514 IPNKSL-KIIKMRLLTRIVVKHVFIYNISLMKSYCANEWKRS*NQSICTSNQTPTLH 347
           +P  SL  II  R   R   KH+ +   + + S CA +W+ S NQ++ ++NQ P  H
Sbjct: 17  LPRYSLFTIIIKRSAMRYFSKHMLLILTTFLLSGCAKQWQPSWNQAVSSNNQQPVEH 73


>UniRef50_UPI0000D55AA9 Cluster: PREDICTED: similar to CG2101-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG2101-PA - Tribolium castaneum
          Length = 320

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +3

Query: 570 WISPPSGSRGFHSMTFPQPCHNHRSPTGLYPGKF 671
           W +   G R FH  T P P     +PTG+ PGK+
Sbjct: 73  WGNVWPGPRSFHPATVPLPIRQGYTPTGVAPGKY 106


>UniRef50_Q5WQW3 Cluster: Cap6p; n=4; Filobasidiella neoformans|Rep:
           Cap6p - Cryptococcus neoformans var. neoformans
          Length = 575

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 622 WGNVMEWNPREPLGGLIHKWIDGLKKSFW 536
           +G  + WNP  P     H W DGL K +W
Sbjct: 522 YGETIWWNPNPPPRIRCHDWPDGLGKGYW 550


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,021,282
Number of Sequences: 1657284
Number of extensions: 15189714
Number of successful extensions: 35888
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35877
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)