Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31021
         (724 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457393-1|CAG33674.1|  170|Homo sapiens LOC55954 protein.             31   5.5  
CR456353-1|CAG30239.1|  170|Homo sapiens Em:AC005529.5 protein.        31   5.5  
BC009717-1|AAH09717.1|  170|Homo sapiens zinc finger, matrin typ...    31   5.5  
AL160311-1|CAB77284.1|  170|Homo sapiens hypothetical protein pr...    31   5.5  

>CR457393-1|CAG33674.1|  170|Homo sapiens LOC55954 protein.
          Length = 170

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 590 LAWVPFHDIPPALS*PPVPNWPVSRQIR 673
           + W P  ++PP+L  PP   WP+  +++
Sbjct: 141 VGWPPVQELPPSLRAPPPGGWPLQPRVQ 168


>CR456353-1|CAG30239.1|  170|Homo sapiens Em:AC005529.5 protein.
          Length = 170

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 590 LAWVPFHDIPPALS*PPVPNWPVSRQIR 673
           + W P  ++PP+L  PP   WP+  +++
Sbjct: 141 VGWPPVQELPPSLRAPPPGGWPLQPRVQ 168


>BC009717-1|AAH09717.1|  170|Homo sapiens zinc finger, matrin type 5
           protein.
          Length = 170

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 590 LAWVPFHDIPPALS*PPVPNWPVSRQIR 673
           + W P  ++PP+L  PP   WP+  +++
Sbjct: 141 VGWPPVQELPPSLRAPPPGGWPLQPRVQ 168


>AL160311-1|CAB77284.1|  170|Homo sapiens hypothetical protein
           protein.
          Length = 170

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 590 LAWVPFHDIPPALS*PPVPNWPVSRQIR 673
           + W P  ++PP+L  PP   WP+  +++
Sbjct: 141 VGWPPVQELPPSLRAPPPGGWPLQPRVQ 168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,823,036
Number of Sequences: 237096
Number of extensions: 2401137
Number of successful extensions: 8384
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8383
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)