Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31021
         (724 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113331-1|AAM29336.1|  623|Drosophila melanogaster AT29350p pro...    31   1.2  
AE014296-3011|AAF49267.1|  623|Drosophila melanogaster CG5103-PA...    31   1.2  
AE014296-862|AAF47912.1|  707|Drosophila melanogaster CG13722-PA...    29   8.5  

>AY113331-1|AAM29336.1|  623|Drosophila melanogaster AT29350p
           protein.
          Length = 623

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -2

Query: 702 LDGRPCPRMPRICLDTGQLGTGGYDRAGGMSWNGTH 595
           L+G P PR+  + + TG LG  G   A GM++ G H
Sbjct: 106 LEGHPTPRLSFVDVSTGSLGQ-GISVAAGMAYVGKH 140


>AE014296-3011|AAF49267.1|  623|Drosophila melanogaster CG5103-PA
           protein.
          Length = 623

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -2

Query: 702 LDGRPCPRMPRICLDTGQLGTGGYDRAGGMSWNGTH 595
           L+G P PR+  + + TG LG  G   A GM++ G H
Sbjct: 106 LEGHPTPRLSFVDVSTGSLGQ-GISVAAGMAYVGKH 140


>AE014296-862|AAF47912.1|  707|Drosophila melanogaster CG13722-PA
           protein.
          Length = 707

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = +1

Query: 517 LSLVSLTKNFF*VHLSIYG*AHQVARVGSIP*HS-PSPVITTGPQLACIQANSGHPRTRP 693
           L+L++L++++F    +  G  + + +V     +S P P I   P L  +  +SG+   +P
Sbjct: 9   LALIALSQSYF---TAAQGYDYPIPKVSFTDGYSYPKPAIPFPPPLPKVVESSGYSYPKP 65

Query: 694 SV*PPPFGPK 723
            V  PP  PK
Sbjct: 66  VVPFPPAQPK 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,389,750
Number of Sequences: 53049
Number of extensions: 681182
Number of successful extensions: 1548
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1548
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)