Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31021
         (724 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021567-3|CAA16509.2|  650|Caenorhabditis elegans Hypothetical ...    29   2.5  
AF040649-4|ABS19468.1|  152|Caenorhabditis elegans Hypothetical ...    28   7.8  

>AL021567-3|CAA16509.2|  650|Caenorhabditis elegans Hypothetical
           protein F21A10.4 protein.
          Length = 650

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 550 KKSFWLMKLGLIIPNKSLKIIKMRLLTRIVVKHVFIYNISLMK 422
           +KS     + L++P +SL  I M L   +VVKH  +  I + K
Sbjct: 221 QKSTANTSISLVVPPESLISISMSLWNVLVVKHEIVLEIKMQK 263


>AF040649-4|ABS19468.1|  152|Caenorhabditis elegans Hypothetical
           protein F33H12.7 protein.
          Length = 152

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 562 IDGLKKSFWLMKLGLIIPNKSLK 494
           +D +    WL +LG +IPN+S+K
Sbjct: 74  VDAVIDQVWLEELGKLIPNRSIK 96


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,382,512
Number of Sequences: 27780
Number of extensions: 358708
Number of successful extensions: 868
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)