Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31020
         (545 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    25   1.6  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   5.0  
CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply, Sphingosine...    23   8.7  

>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -2

Query: 355 YLASCVLNV*HFIYELKPCYRPF-SW 281
           Y +SC +NV +F Y+ + C   F SW
Sbjct: 150 YKSSCEMNVEYFPYDEQTCLMKFGSW 175


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -2

Query: 355 YLASCVLNV*HFIYELKPCYRPFSWKNY*FN*VVEKHQS 239
           + +SC ++V +F ++ + C+  F    Y  N +  KH++
Sbjct: 156 FKSSCEIDVRYFPFDQQTCFMKFGSWTYDGNQIDLKHKN 194


>CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply,
           Sphingosine-phosphate lyase protein.
          Length = 519

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 545 DFAIFISNGECENLG 501
           DF IF+  GE  NLG
Sbjct: 416 DFDIFLLGGELSNLG 430


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,785
Number of Sequences: 2352
Number of extensions: 10230
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)