Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31019
         (878 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   3.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   4.0  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    23   9.3  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   9.3  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 592 RKTHSRPSKCWSCWPFNIQNFKISSNLK 675
           R TH RP KC  C   +++  K+  +++
Sbjct: 205 RHTHERPHKCTECDYASVELSKLKRHIR 232


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 120  SRTNSADDNKIATAESCCFVDSVADLENTIQIVTKIRP 7
            SR NSAD N +AT  S   V  V + E    ++ ++ P
Sbjct: 1266 SRKNSADSNSVATHSSYYSVTGV-EPEKEFVVMPRLPP 1302


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 294 CVGVWCSLIFFI 259
           C  +WCSLI +I
Sbjct: 293 CTMIWCSLILYI 304


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -2

Query: 838 PRVPFQGSLGQSAVRVSPIKMVWIWVNQVFYISGQEMGET 719
           P  P   S  Q   R +P+K  + W+ +  Y S    G+T
Sbjct: 173 PGAPTGSSSPQITPRPTPVKSPYEWMKKQSYQSQPNPGKT 212


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 908,530
Number of Sequences: 2352
Number of extensions: 19745
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)