Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31017
         (862 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.58 
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    24   1.3  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   2.3  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   4.1  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    22   7.2  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   7.2  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   7.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 33/152 (21%), Positives = 56/152 (36%), Gaps = 6/152 (3%)
 Frame = +1

Query: 112  WTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSRQPDGEMRPPSW 291
            W+S ++   W  T    +  +R   +S   RPT  ++P     T  ++  P   + P   
Sbjct: 1043 WSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWP-----TQGTTIPPPAVVMP--- 1094

Query: 292  QVHGLLYAVPW*RRTQGCERGHRY---HQNQAYYPIRRLVSNRFQGRYQLPATHRGARRR 462
            +V          + +Q CE G      H   AYY   R V    + +Y     H    R+
Sbjct: 1095 EVD---------KPSQPCEPGQYVPDPHNCNAYY---RCVLGELRKQYCAGGLHWNKERK 1142

Query: 463  L---GQGSTCRLHVVQHQPIAEAWGSP*PTSF 549
            +    + + C      H+P   +W  P   S+
Sbjct: 1143 ICDWPKSAKCEEKKPGHKPSTSSWQKPTKPSY 1174



 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 151  PVSTSHWSRTRQSSLPRRPT 210
            P +T+HW     +S   RPT
Sbjct: 1177 PSTTNHWQTKTTTSTTTRPT 1196



 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 541 LVKASPKLRRWVGVGQHADGTLNLGQVAS 455
           L + +PKL+  + VG+  DG+     + S
Sbjct: 241 LKRVNPKLKVLISVGEGRDGSHRFSTMVS 269



 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 363  PSKPSVLSNSSTGVQPVSRSVSTTSHP 443
            P+KPS    S+T       + STT+ P
Sbjct: 1169 PTKPSYRPPSTTNHWQTKTTTSTTTRP 1195


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 534 RRAPSFGDGLVLDNMQ 487
           R+   F +GL+LDNMQ
Sbjct: 196 RKVTDFFEGLILDNMQ 211


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +1

Query: 331 RTQGCERGHRYHQNQAYYPIRRLVSNRFQGRY--QLPATHRGARRRLGQGSTCRLHV 495
           R    ER      N  +  +R+ +       +  Q P+T RGA ++L +  T RL V
Sbjct: 89  RRNARERNRVKQVNNGFATLRQHIPASVAAAFAPQGPSTGRGASKKLSKVETLRLAV 145


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 187 SSLPRRPTMNSFPSPRSQTHASSRQPDGEMRPPS 288
           S+ PR  +  +  S  S + ASS  PD E+R  S
Sbjct: 120 SAAPRTASRET-KSSESDSGASSADPDDELRSSS 152


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 839 LPGPFSLITPNLPKKGEFCLQGD*SW*PPG 750
           LP P  +  P L + G+ CL G      PG
Sbjct: 113 LPSPRRVAVPVLVRDGKPCLSGGPKHPDPG 142


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 WLAVCCTVVTSYPRM 344
           W  VC  VV  YPR+
Sbjct: 166 WREVCTFVVQVYPRL 180


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 320 GTAYSKPCTCHDGGRISPSG 261
           G A++ P   HD G  SP G
Sbjct: 50  GNAHTGPTGTHDAGFPSPRG 69


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 608 PSYLHRRTSARKHAWRNMRSKL 543
           P   H    ++   WRN+R+KL
Sbjct: 109 PLAFHTLFISKDAVWRNLRTKL 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,078
Number of Sequences: 336
Number of extensions: 6338
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)