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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31017
         (862 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch...   196   3e-51
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar...   192   5e-50
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces...    89   1e-18
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|...    53   5e-08
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c...    31   0.21 
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1...    31   0.28 
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    30   0.37 
SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos...    28   2.0  
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||...    28   2.0  
SPAC824.08 |gda1|gdp1|guanosine-diphosphatase Gda1|Schizosacchar...    27   4.5  
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch...    26   6.0  
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc...    26   6.0  
SPAC3C7.09 |set8||lysine methyltransferase Set8 |Schizosaccharom...    26   6.0  
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    26   6.0  
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch...    26   6.0  
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit...    26   7.9  
SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family |Schizos...    26   7.9  
SPAC343.18 |rfp2||ubiquitin-protein ligase E3 Rfp2|Schizosacchar...    26   7.9  

>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 455

 Score =  196 bits (479), Expect = 3e-51
 Identities = 87/125 (69%), Positives = 103/125 (82%)
 Frame = +2

Query: 260 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 439
           NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI Y+P
Sbjct: 304 NQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEP 363

Query: 440 PTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGEGMKEGEF 619
           P  VPG  +AKV RAVCMLSNT    +  +RLD +     Y+KRAFVHWYVGEGM+EGEF
Sbjct: 364 PQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDL-MYSKRAFVHWYVGEGMEEGEF 422

Query: 620 SEARE 634
           SEARE
Sbjct: 423 SEARE 427



 Score =  154 bits (373), Expect = 2e-38
 Identities = 73/104 (70%), Positives = 82/104 (78%)
 Frame = +3

Query: 3   RRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYA 182
           RRNLDIERPTY NLNRLI Q+VSSITASLRF G+LNVDL EFQTNLVPYPRIHFPLVTY+
Sbjct: 218 RRNLDIERPTYENLNRLIAQVVSSITASLRFAGSLNVDLNEFQTNLVPYPRIHFPLVTYS 277

Query: 183 PVISAEKAYHEQLSVAEITNACFEPPTRW*NATPVMASTWLAVC 314
           P++SA KA+HE  SV EITN CFEP  +     P     ++A C
Sbjct: 278 PIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDP-RTGRYMATC 320


>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
           2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 449

 Score =  192 bits (468), Expect = 5e-50
 Identities = 86/125 (68%), Positives = 101/125 (80%)
 Frame = +2

Query: 260 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 439
           NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI  +P
Sbjct: 300 NQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRP 359

Query: 440 PTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGEGMKEGEF 619
           P  + G ++AKV RAVCMLSNT    +  +RLD +     Y+KRAFVHWYVGEGM+EGEF
Sbjct: 360 PQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDL-MYSKRAFVHWYVGEGMEEGEF 418

Query: 620 SEARE 634
           SEARE
Sbjct: 419 SEARE 423



 Score =  157 bits (380), Expect = 2e-39
 Identities = 74/104 (71%), Positives = 84/104 (80%)
 Frame = +3

Query: 3   RRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYA 182
           RRNLDIERP+Y NLNRLI Q+VSSITASLRF+G+LNVDL EFQTNLVPYPRIHFPLVTYA
Sbjct: 214 RRNLDIERPSYENLNRLIAQVVSSITASLRFEGSLNVDLAEFQTNLVPYPRIHFPLVTYA 273

Query: 183 PVISAEKAYHEQLSVAEITNACFEPPTRW*NATPVMASTWLAVC 314
           P++SA KA+HE  SV EITN CFEP  +     P  A  ++A C
Sbjct: 274 PIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDP-RAGRYMATC 316


>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 448

 Score = 88.6 bits (210), Expect = 1e-18
 Identities = 47/130 (36%), Positives = 72/130 (55%)
 Frame = +2

Query: 239 KRMLRAANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 418
           ++M  A N MV  DPRHG+Y+    L+RG V  K+V+  I +++TK +  FV+W P    
Sbjct: 291 QQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVL 350

Query: 419 VGINYQPPTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGE 598
             +   PP      DL   + +   + N+    ++  RL  Q S + + ++AF+HWY GE
Sbjct: 351 KAVCSVPPK-----DL---KMSATFIGNSTSIQEIFRRLGDQFS-AMFRRKAFLHWYTGE 401

Query: 599 GMKEGEFSEA 628
           GM E EF+EA
Sbjct: 402 GMDEMEFTEA 411



 Score = 74.1 bits (174), Expect = 2e-14
 Identities = 31/81 (38%), Positives = 52/81 (64%)
 Frame = +3

Query: 12  LDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVI 191
           L I+ P+Y +LN L+  +++ +T S RF G LN DL +   N+VP+PR+HF +V +AP+ 
Sbjct: 215 LKIKSPSYDDLNHLVSAVMAGVTTSFRFPGELNSDLRKLAVNMVPFPRLHFFMVGFAPLA 274

Query: 192 SAEKAYHEQLSVAEITNACFE 254
           +   +  + +SV E+T   F+
Sbjct: 275 AIGSSSFQAVSVPELTQQMFD 295


>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 446

 Score = 53.2 bits (122), Expect = 5e-08
 Identities = 22/58 (37%), Positives = 35/58 (60%)
 Frame = +3

Query: 12  LDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 185
           L  + PT+   N+L+  ++S+ T +LR+ G +N DL     +L+P PR HF L +Y P
Sbjct: 218 LHTQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPSPRCHFLLTSYTP 275



 Score = 42.7 bits (96), Expect = 6e-05
 Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
 Frame = +2

Query: 239 KRMLRAANQMVKCDP-RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 415
           +R+L   NQMV  +P +   +++   + +G+  P DV+ ++  I+ +R   F+ W P   
Sbjct: 297 RRLLLPKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASI 356

Query: 416 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTNPSPKLGAR-LDQQVSTSCYAKRAFVHWYV 592
           +V ++ + P +     ++ +     ML+N      L  R LDQ        + AF+  Y 
Sbjct: 357 QVALSKKSPYIKTNHRVSGL-----MLANHTSIASLFKRTLDQY--DRLRKRNAFLEQYK 409

Query: 593 GEGMKEGEFSE 625
            E + E + +E
Sbjct: 410 KEAIFEDDLNE 420


>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 474

 Score = 31.1 bits (67), Expect = 0.21
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = +1

Query: 145 LTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSRQPDGEMRPP 285
           LTP + S +S +  +S  +R ++N+ PS  + +H+SS Q     RPP
Sbjct: 130 LTPKNPSLFSSSNAAS--QRGSLNTAPSNFAYSHSSSLQTSASSRPP 174


>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 857

 Score = 30.7 bits (66), Expect = 0.28
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +3

Query: 321 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 455
           VV   P +  RP++P  P  LS     V PV+  V +   PP  P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 30.3 bits (65), Expect = 0.37
 Identities = 35/145 (24%), Positives = 50/145 (34%)
 Frame = +3

Query: 276 ATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 455
           +TPV ++      CT  TS P   T   + S P   +N +T       S   TS P    
Sbjct: 437 STPVTSTPLATTNCTTSTSVPY--TSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTPLTTT 494

Query: 456 EATWPRFNVPSACCPTPTHRRSLGLALTNKFRPHVTPSVLSCTGTSVKV*RKESSPKPVK 635
             T    +VP    P  +   ++  +      P  T +    T TSV       +  P+ 
Sbjct: 495 NCT-TSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTN--CTTSTSVLYTSTPVTSTPLA 551

Query: 636 ELGCPSKGGARYPIWP**VSRITIS 710
              C +     Y   P   S  TIS
Sbjct: 552 TTNCTTSTSVPYTSTPVTSSNYTIS 576


>SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase
           Ubp1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 849

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 753 WRLPTLIALQAKFPLFGQIGGN*RKRARQPDLALFP 860
           WRLP ++ +      F   GG+ R+R ++ DL ++P
Sbjct: 729 WRLPKILVIHLN--RFSGHGGDLRRRRKRRDLVVYP 762


>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 3227

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -1

Query: 361 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGSKHAF 239
           S G   +LGY ++     A++V+A + V   HL+ G   AF
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAF 447


>SPAC824.08 |gda1|gdp1|guanosine-diphosphatase
           Gda1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 556

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 646 QPSSFTGFGELSFLHTFTDVPVH 578
           +P SF G  +  F  TFTD P++
Sbjct: 418 RPCSFNGVHQPKFTETFTDSPIY 440


>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
           Hus5|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 157

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 338 WVRRHHGTAYSKPCTCHDGGRISPSGWRL 252
           W R H    Y+KPC   DGG +    W++
Sbjct: 16  WRRDHPFGFYAKPCKSSDGG-LDLMNWKV 43


>SPBC428.07 |meu6||meiotic chromosome segregation protein
           Meu6|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 651

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +3

Query: 102 ALNVDLTEFQTNLVPYPRIHFPLVT--YAPVISAEKAYHEQLSVAEITNACFEPPTRW*N 275
           A +V++ E +TN +P    HFP  T   AP  S EK        +  T    +  T+  N
Sbjct: 368 AQSVEVPENETNQIPTTEEHFPATTEEVAPA-SEEKPATGPAEESTSTQNVEQASTQNDN 426

Query: 276 ATPV 287
            TP+
Sbjct: 427 GTPI 430


>SPAC3C7.09 |set8||lysine methyltransferase Set8
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 429

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 488 RRHVEPWPSRLRAPRWV 438
           +R+ + WPS++  P+WV
Sbjct: 153 QRYSDSWPSKITLPKWV 169


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
 Frame = +3

Query: 327  TSYPRM*TRPSLP-SKPSVLSNSS--TGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 497
            TS P     PS P SKP   S ++    V PV + +S+ + P   P A  P   VPS   
Sbjct: 983  TSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPK-LSSKAPPVPLPSADAPPIPVPSTAP 1041

Query: 498  PTPTHRRSLGLALTNKFRPHVTPSV 572
            P P    +  +  ++   P   P V
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPV 1066


>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 628

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
 Frame = +3

Query: 357 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 443
           +LP KPS+   +++S   V+P S   STTS+P
Sbjct: 5   TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36


>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
            hand and WH2 motif |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1794

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 16/60 (26%), Positives = 24/60 (40%)
 Frame = +3

Query: 354  PSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPTHRRSLGLA 533
            P++P+ P      S   QP S     T+     P +     +VPS   P P H  +  L+
Sbjct: 1487 PAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPSPAPPAPQHPSAAALS 1546


>SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 482

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 14/57 (24%), Positives = 28/57 (49%)
 Frame = -2

Query: 678 KLGTGPPLWRGSQVPSRASENSPSFIPSPTYQCTKARLA*HEVETCWSRRAPSFGDG 508
           K+ +  P+++ +Q   R + + P   P P Y C +     H ++ C +   P++ DG
Sbjct: 155 KMASATPIYKPNQ--RRIAASVPDKPPPPGYICYRCGQKGHWIQACPTNADPNY-DG 208


>SPAC343.18 |rfp2||ubiquitin-protein ligase E3
           Rfp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 205

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -3

Query: 680 PNWVPGPPFGGAAKFLHGLRRTLLPSYLHRRTSARKHAWRNMRSK 546
           P+ V  PP        +G RRT   S   RRT   ++ +RN R K
Sbjct: 74  PSPVTRPPVAVGGGIFYGARRTRNRSQTQRRT-LLENGFRNSRKK 117


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,126,093
Number of Sequences: 5004
Number of extensions: 99004
Number of successful extensions: 345
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 340
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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