Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31017
(862 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 224 5e-59
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 224 5e-59
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 224 5e-59
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 223 9e-59
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 223 9e-59
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 218 4e-57
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 172 2e-43
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 87 1e-17
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 85 8e-17
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 85 8e-17
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 84 1e-16
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 83 2e-16
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 83 2e-16
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 83 3e-16
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 82 4e-16
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 81 9e-16
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 52 5e-07
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 52 5e-07
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 36 0.046
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 34 0.11
At3g16350.1 68416.m02068 myb family transcription factor ; conta... 33 0.24
At2g40070.1 68415.m04923 expressed protein 32 0.56
At1g01190.1 68414.m00032 cytochrome P450, putative similar to cy... 31 0.99
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.7
At5g11000.1 68418.m01281 expressed protein 29 3.0
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 29 4.0
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 29 4.0
At5g05965.1 68418.m00660 hypothetical protein 28 7.0
At4g28490.1 68417.m04076 leucine-rich repeat transmembrane prote... 28 7.0
At3g62200.1 68416.m06988 expressed protein contains Pfam profile... 28 7.0
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 7.0
At1g68080.1 68414.m07777 expressed protein 28 7.0
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 28 9.2
At5g17260.1 68418.m02022 no apical meristem (NAM) family protein... 28 9.2
At5g15840.1 68418.m01853 zinc finger protein CONSTANS (CO) ident... 28 9.2
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 28 9.2
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 224 bits (548), Expect = 5e-59
Identities = 99/126 (78%), Positives = 111/126 (88%)
Frame = +2
Query: 257 ANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQ 436
A+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQ
Sbjct: 299 ASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQ 358
Query: 437 PPTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGEGMKEGE 616
PPTVVPGGDLAKVQRAVCM+SN+ ++ +R+D + YAKRAFVHWYVGEGM+EGE
Sbjct: 359 PPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDL-MYAKRAFVHWYVGEGMEEGE 417
Query: 617 FSEARE 634
FSEARE
Sbjct: 418 FSEARE 423
Score = 156 bits (378), Expect = 2e-38
Identities = 74/104 (71%), Positives = 87/104 (83%)
Frame = +3
Query: 3 RRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYA 182
RR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YA
Sbjct: 214 RRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYA 273
Query: 183 PVISAEKAYHEQLSVAEITNACFEPPTRW*NATPVMASTWLAVC 314
PVISAEKA+HEQLSVAEITN+ FEP + P ++A C
Sbjct: 274 PVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP-RHGKYMACC 316
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 224 bits (548), Expect = 5e-59
Identities = 99/126 (78%), Positives = 111/126 (88%)
Frame = +2
Query: 257 ANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQ 436
A+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQ
Sbjct: 299 ASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQ 358
Query: 437 PPTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGEGMKEGE 616
PPTVVPGGDLAKVQRAVCM+SN+ ++ +R+D + YAKRAFVHWYVGEGM+EGE
Sbjct: 359 PPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDL-MYAKRAFVHWYVGEGMEEGE 417
Query: 617 FSEARE 634
FSEARE
Sbjct: 418 FSEARE 423
Score = 155 bits (377), Expect = 3e-38
Identities = 74/104 (71%), Positives = 86/104 (82%)
Frame = +3
Query: 3 RRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYA 182
RR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YA
Sbjct: 214 RRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYA 273
Query: 183 PVISAEKAYHEQLSVAEITNACFEPPTRW*NATPVMASTWLAVC 314
PVISAEKA+HEQLSVAEITN+ FEP + P ++A C
Sbjct: 274 PVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP-RHGKYMACC 316
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 224 bits (548), Expect = 5e-59
Identities = 99/126 (78%), Positives = 111/126 (88%)
Frame = +2
Query: 257 ANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQ 436
A+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQ
Sbjct: 299 ASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQ 358
Query: 437 PPTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGEGMKEGE 616
PPTVVPGGDLAKVQRAVCM+SN+ ++ +R+D + YAKRAFVHWYVGEGM+EGE
Sbjct: 359 PPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDL-MYAKRAFVHWYVGEGMEEGE 417
Query: 617 FSEARE 634
FSEARE
Sbjct: 418 FSEARE 423
Score = 155 bits (377), Expect = 3e-38
Identities = 74/104 (71%), Positives = 86/104 (82%)
Frame = +3
Query: 3 RRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYA 182
RR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YA
Sbjct: 214 RRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYA 273
Query: 183 PVISAEKAYHEQLSVAEITNACFEPPTRW*NATPVMASTWLAVC 314
PVISAEKA+HEQLSVAEITN+ FEP + P ++A C
Sbjct: 274 PVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP-RHGKYMACC 316
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 223 bits (546), Expect = 9e-59
Identities = 98/126 (77%), Positives = 110/126 (87%)
Frame = +2
Query: 257 ANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQ 436
A+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQ
Sbjct: 299 ASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQ 358
Query: 437 PPTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGEGMKEGE 616
PPTVVPGGDLAKVQRAVCM+SN ++ +R+D + YAKRAFVHWYVGEGM+EGE
Sbjct: 359 PPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDL-MYAKRAFVHWYVGEGMEEGE 417
Query: 617 FSEARE 634
FSEARE
Sbjct: 418 FSEARE 423
Score = 155 bits (375), Expect = 5e-38
Identities = 75/104 (72%), Positives = 84/104 (80%)
Frame = +3
Query: 3 RRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYA 182
RR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YA
Sbjct: 214 RRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYA 273
Query: 183 PVISAEKAYHEQLSVAEITNACFEPPTRW*NATPVMASTWLAVC 314
PVISA KAYHEQLSV EITNA FEP + P ++A C
Sbjct: 274 PVISAAKAYHEQLSVPEITNAVFEPASMMAKCDP-RHGKYMACC 316
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 223 bits (546), Expect = 9e-59
Identities = 98/126 (77%), Positives = 110/126 (87%)
Frame = +2
Query: 257 ANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQ 436
A+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQ
Sbjct: 299 ASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQ 358
Query: 437 PPTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGEGMKEGE 616
PPTVVPGGDLAKVQRAVCM+SN ++ +R+D + YAKRAFVHWYVGEGM+EGE
Sbjct: 359 PPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDL-MYAKRAFVHWYVGEGMEEGE 417
Query: 617 FSEARE 634
FSEARE
Sbjct: 418 FSEARE 423
Score = 155 bits (375), Expect = 5e-38
Identities = 75/104 (72%), Positives = 84/104 (80%)
Frame = +3
Query: 3 RRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYA 182
RR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YA
Sbjct: 214 RRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYA 273
Query: 183 PVISAEKAYHEQLSVAEITNACFEPPTRW*NATPVMASTWLAVC 314
PVISA KAYHEQLSV EITNA FEP + P ++A C
Sbjct: 274 PVISAAKAYHEQLSVPEITNAVFEPASMMAKCDP-RHGKYMACC 316
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 218 bits (532), Expect = 4e-57
Identities = 95/126 (75%), Positives = 108/126 (85%)
Frame = +2
Query: 257 ANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQ 436
+N M KCDPRHGKYMACC++YRGDVVPKDVN A+A IK KRTIQFVDWCPTGFK GINYQ
Sbjct: 299 SNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQ 358
Query: 437 PPTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGEGMKEGE 616
PP+VVPGGDLAKVQRAVCM+SN ++ +R+D + Y+KRAFVHWYVGEGM+EGE
Sbjct: 359 PPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDL-MYSKRAFVHWYVGEGMEEGE 417
Query: 617 FSEARE 634
FSEARE
Sbjct: 418 FSEARE 423
Score = 144 bits (349), Expect = 7e-35
Identities = 66/85 (77%), Positives = 75/85 (88%)
Frame = +3
Query: 3 RRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYA 182
RR+LDIERPTY+NLNRLI Q +SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YA
Sbjct: 214 RRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYA 273
Query: 183 PVISAEKAYHEQLSVAEITNACFEP 257
PVIS+ KAYHEQ SV EIT + FEP
Sbjct: 274 PVISSAKAYHEQFSVPEITTSVFEP 298
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 172 bits (419), Expect = 2e-43
Identities = 73/83 (87%), Positives = 79/83 (95%)
Frame = +2
Query: 257 ANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQ 436
A+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQ
Sbjct: 299 ASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQ 358
Query: 437 PPTVVPGGDLAKVQRAVCMLSNT 505
PPTVVPGGDLAKVQRAVCM+SN+
Sbjct: 359 PPTVVPGGDLAKVQRAVCMISNS 381
Score = 156 bits (378), Expect = 2e-38
Identities = 74/104 (71%), Positives = 87/104 (83%)
Frame = +3
Query: 3 RRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYA 182
RR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YA
Sbjct: 214 RRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYA 273
Query: 183 PVISAEKAYHEQLSVAEITNACFEPPTRW*NATPVMASTWLAVC 314
PVISAEKA+HEQLSVAEITN+ FEP + P ++A C
Sbjct: 274 PVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP-RHGKYMACC 316
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 87.0 bits (206), Expect = 1e-17
Identities = 43/130 (33%), Positives = 71/130 (54%)
Frame = +2
Query: 239 KRMLRAANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 418
++M A N M DPRHG+Y+ ++RG + K+V+ I ++ K + FV+W P K
Sbjct: 292 QQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVK 351
Query: 419 VGINYQPPTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGE 598
+ PPT ++ A + N+ ++ R+ +Q T+ + ++AF+HWY GE
Sbjct: 352 SSVCDIPPT--------GIKMASTFVGNSTSIQEMFRRVSEQF-TAMFRRKAFLHWYTGE 402
Query: 599 GMKEGEFSEA 628
GM E EF+EA
Sbjct: 403 GMDEMEFTEA 412
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +3
Query: 6 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 185
R L + P++ +LN LI +S +T SLRF G LN DL + NL+P+PR+HF +V +AP
Sbjct: 214 RTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 273
Query: 186 VISAEKAYHEQLSVAEITNACFE 254
+ S + L+V E+T ++
Sbjct: 274 LTSRGSQQYISLTVPELTQQMWD 296
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 84.6 bits (200), Expect = 8e-17
Identities = 42/130 (32%), Positives = 71/130 (54%)
Frame = +2
Query: 239 KRMLRAANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 418
++M A N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K
Sbjct: 291 QQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVK 350
Query: 419 VGINYQPPTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGE 598
+ PPT ++ A + N+ ++ R+ +Q T+ + ++AF+HWY GE
Sbjct: 351 STVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQF-TAMFRRKAFLHWYTGE 401
Query: 599 GMKEGEFSEA 628
GM E EF+EA
Sbjct: 402 GMDEMEFTEA 411
Score = 71.7 bits (168), Expect = 6e-13
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +3
Query: 6 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 185
R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP
Sbjct: 213 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272
Query: 186 VISAEKAYHEQLSVAEITNACFE 254
+ S + L+V E+T ++
Sbjct: 273 LTSRGSQQYRALTVPELTQQMWD 295
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 84.6 bits (200), Expect = 8e-17
Identities = 42/130 (32%), Positives = 71/130 (54%)
Frame = +2
Query: 239 KRMLRAANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 418
++M A N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K
Sbjct: 291 QQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVK 350
Query: 419 VGINYQPPTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGE 598
+ PPT ++ A + N+ ++ R+ +Q T+ + ++AF+HWY GE
Sbjct: 351 STVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQF-TAMFRRKAFLHWYTGE 401
Query: 599 GMKEGEFSEA 628
GM E EF+EA
Sbjct: 402 GMDEMEFTEA 411
Score = 72.5 bits (170), Expect = 3e-13
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +3
Query: 6 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 185
R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP
Sbjct: 213 RTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272
Query: 186 VISAEKAYHEQLSVAEITNACFE 254
+ S + L+V E+T ++
Sbjct: 273 LTSRGSQQYRNLTVPELTQQMWD 295
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 84.2 bits (199), Expect = 1e-16
Identities = 42/130 (32%), Positives = 70/130 (53%)
Frame = +2
Query: 239 KRMLRAANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 418
++M + N M DPRHG+Y+ ++RG + K+V+ I I+ K + FV+W P K
Sbjct: 292 QQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVK 351
Query: 419 VGINYQPPTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGE 598
+ PP ++ A + N+ ++ R+ +Q T+ + ++AF+HWY GE
Sbjct: 352 SSVCDIPP--------KGLKMAATFVGNSTSIQEMFRRVSEQF-TAMFRRKAFLHWYTGE 402
Query: 599 GMKEGEFSEA 628
GM E EF+EA
Sbjct: 403 GMDEMEFTEA 412
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +3
Query: 6 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 185
R L + P++ +LN LI +S +T SLRF G LN DL + NL+P+PR+HF +V +AP
Sbjct: 214 RTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 273
Query: 186 VISAEKAYHEQLSVAEITNACFE 254
+ S + L+V E+T ++
Sbjct: 274 LTSRGSQQYISLTVPELTQQMWD 296
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 83.4 bits (197), Expect = 2e-16
Identities = 41/130 (31%), Positives = 71/130 (54%)
Frame = +2
Query: 239 KRMLRAANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 418
++M + N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K
Sbjct: 291 QQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVK 350
Query: 419 VGINYQPPTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGE 598
+ PPT ++ A + N+ ++ R+ +Q T+ + ++AF+HWY GE
Sbjct: 351 STVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQF-TAMFRRKAFLHWYTGE 401
Query: 599 GMKEGEFSEA 628
GM E EF+EA
Sbjct: 402 GMDEMEFTEA 411
Score = 72.1 bits (169), Expect = 4e-13
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +3
Query: 6 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 185
R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP
Sbjct: 213 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272
Query: 186 VISAEKAYHEQLSVAEITNACFE 254
+ S + L+V E+T ++
Sbjct: 273 LTSRGSQQYRSLTVPELTQQMWD 295
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 83.4 bits (197), Expect = 2e-16
Identities = 41/130 (31%), Positives = 71/130 (54%)
Frame = +2
Query: 239 KRMLRAANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 418
++M + N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K
Sbjct: 291 QQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVK 350
Query: 419 VGINYQPPTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGE 598
+ PPT ++ A + N+ ++ R+ +Q T+ + ++AF+HWY GE
Sbjct: 351 STVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQF-TAMFRRKAFLHWYTGE 401
Query: 599 GMKEGEFSEA 628
GM E EF+EA
Sbjct: 402 GMDEMEFTEA 411
Score = 72.1 bits (169), Expect = 4e-13
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +3
Query: 6 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 185
R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP
Sbjct: 213 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272
Query: 186 VISAEKAYHEQLSVAEITNACFE 254
+ S + L+V E+T ++
Sbjct: 273 LTSRGSQQYRSLTVPELTQQMWD 295
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 82.6 bits (195), Expect = 3e-16
Identities = 42/130 (32%), Positives = 71/130 (54%)
Frame = +2
Query: 239 KRMLRAANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 418
++M A N M DPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K
Sbjct: 291 QQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVK 350
Query: 419 VGINYQPPTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGE 598
+ + P G ++ A + N+ ++ R+ +Q T+ + ++AF+HWY GE
Sbjct: 351 SSV----CDIAPKG----LKMASTFIGNSTSIQEMFRRVSEQF-TAMFRRKAFLHWYTGE 401
Query: 599 GMKEGEFSEA 628
GM E EF+EA
Sbjct: 402 GMDEMEFTEA 411
Score = 74.9 bits (176), Expect = 6e-14
Identities = 34/83 (40%), Positives = 50/83 (60%)
Frame = +3
Query: 6 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 185
R L + PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP
Sbjct: 213 RTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272
Query: 186 VISAEKAYHEQLSVAEITNACFE 254
+ S + LSV E+T ++
Sbjct: 273 LTSRGSQQYSALSVPELTQQMWD 295
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 82.2 bits (194), Expect = 4e-16
Identities = 41/130 (31%), Positives = 71/130 (54%)
Frame = +2
Query: 239 KRMLRAANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 418
++M A N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K
Sbjct: 291 QQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVK 350
Query: 419 VGINYQPPTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGE 598
+ + P G ++ A + N+ ++ R+ +Q T+ + ++AF+HWY GE
Sbjct: 351 SSV----CDIAPTG----LKMASTFIGNSTSIQEMFRRVSEQF-TAMFRRKAFLHWYTGE 401
Query: 599 GMKEGEFSEA 628
GM E EF+EA
Sbjct: 402 GMDEMEFTEA 411
Score = 74.9 bits (176), Expect = 6e-14
Identities = 34/83 (40%), Positives = 50/83 (60%)
Frame = +3
Query: 6 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 185
R L + PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP
Sbjct: 213 RTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272
Query: 186 VISAEKAYHEQLSVAEITNACFE 254
+ S + LSV E+T ++
Sbjct: 273 LTSRGSQQYSALSVPELTQQMWD 295
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 81.0 bits (191), Expect = 9e-16
Identities = 40/130 (30%), Positives = 70/130 (53%)
Frame = +2
Query: 239 KRMLRAANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 418
++M + N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K
Sbjct: 291 QQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVK 350
Query: 419 VGINYQPPTVVPGGDLAKVQRAVCMLSNTNPSPKLGARLDQQVSTSCYAKRAFVHWYVGE 598
+ + P G + A + N+ ++ R+ +Q T+ + ++AF+HWY GE
Sbjct: 351 SSV----CDIAPRG----LSMASTFIGNSTSIQEMFRRVSEQF-TAMFRRKAFLHWYTGE 401
Query: 599 GMKEGEFSEA 628
GM E EF+EA
Sbjct: 402 GMDEMEFTEA 411
Score = 71.7 bits (168), Expect = 6e-13
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +3
Query: 6 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 185
R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP
Sbjct: 213 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272
Query: 186 VISAEKAYHEQLSVAEITNACFE 254
+ S + L+V E+T ++
Sbjct: 273 LTSRGSQQYRALTVPELTQQMWD 295
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +3
Query: 12 LDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVI 191
L + PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR HF + Y P+
Sbjct: 218 LHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLT 277
Query: 192 SAEKA 206
+A
Sbjct: 278 VERQA 282
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Frame = +2
Query: 239 KRMLRAANQMVKCDPRH-----GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWC 403
+R+L+ N MV R+ KY++ + +G+V P V+ ++ I+ ++ + F+DW
Sbjct: 295 RRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWG 354
Query: 404 PTGFKVGINYQPPTV 448
P +V ++ + P V
Sbjct: 355 PASIQVALSKKSPYV 369
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +3
Query: 12 LDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVI 191
L + PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR HF + Y P+
Sbjct: 218 LHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLT 277
Query: 192 SAEKA 206
+A
Sbjct: 278 VERQA 282
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/75 (25%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Frame = +2
Query: 239 KRMLRAANQMVKCDPRH-----GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWC 403
+R+L+ N MV R+ KY++ + +G+V P V+ ++ I+ ++ + F++W
Sbjct: 295 RRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWG 354
Query: 404 PTGFKVGINYQPPTV 448
P +V ++ + P V
Sbjct: 355 PASIQVALSKKSPYV 369
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 35.5 bits (78), Expect = 0.046
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +2
Query: 71 LDHCFFEIRRRSECGPHRVPD*LGALPPYPLPTGHVRASHLCREG 205
L C RRR GP RV + L PP P+ + V + L REG
Sbjct: 97 LQRCIIARRRRDRVGPVRVENTLPPYPPPPMTSAAVTTTTLAREG 141
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 355 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGSKHA 242
GRV I Y D + + H H L TG+ HH+ G K A
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVKDA 97
>At3g16350.1 68416.m02068 myb family transcription factor ; contains
Pfam profile: PF00249 Myb-like DNA-binding domain
Length = 387
Score = 33.1 bits (72), Expect = 0.24
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Frame = -3
Query: 326 HHGTAYSKPCTCHDGGRISPSGWRLEACVCDLGDGKLFMVGL--LGRDDWRVRDQWEVDT 153
HH Y H G G R + +LF+VGL LG+ DWR + V +
Sbjct: 110 HHNEGYLSDDPAHGSGSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTS 169
Query: 152 GVRHQVSLELGEVHIQ--SAVESQRSSDRGDNLSDETI 45
QV+ + I+ S+ +R S D ++DE +
Sbjct: 170 RTPTQVASHAQKYFIRHTSSSRRKRRSSLFDMVTDEMV 207
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 31.9 bits (69), Expect = 0.56
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Frame = +3
Query: 366 SKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPTHR------RSLG 527
SKP+ + S G V+RS +T+ P + + +A TPT R +++
Sbjct: 254 SKPTTSTARSAG--SVTRSTPSTTTKSAGPSRSTTPLSRSTARSSTPTSRPTLPPSKTIS 311
Query: 528 LALTNKFRPHVTPSVLSCTGTSVKV*RKESSPKPVKELGCPSKGGA 665
+ T RP + S + T K SSP P K + PSK A
Sbjct: 312 RSSTPTRRPIASASAATTTANPTISQIKPSSPAPAKPMPTPSKNPA 357
Score = 29.5 bits (63), Expect = 3.0
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +3
Query: 255 PPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPV-SRSVST 431
P T +A P ++T L+ T +S P +RP+LP ++ +S+ +P+ S S +T
Sbjct: 272 PSTTTKSAGPSRSTTPLSRS-TARSSTPT--SRPTLPPSKTISRSSTPTRRPIASASAAT 328
Query: 432 TSHPPWCPEATWPRFNVPSACCPTPTHRRSLGLALTNKFR 551
T+ P + P P+ PTP+ +L A + R
Sbjct: 329 TTANPTISQIK-PSSPAPAKPMPTPSKNPALSRAASPTVR 367
>At1g01190.1 68414.m00032 cytochrome P450, putative similar to
cytochrome P450 SP:O48927 from [Glycine max]
Length = 535
Score = 31.1 bits (67), Expect = 0.99
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 105 LNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 245
+++D NL+P PR FPLV + S+ A+ SVAE++NA
Sbjct: 62 ISLDYNRKYKNLIPGPR-GFPLVGSMSLRSSHVAHQRIASVAEMSNA 107
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 436 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 332
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At5g11000.1 68418.m01281 expressed protein
Length = 389
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +2
Query: 638 TWLPLQRGGPVPNLALISESYYNFTGPSF*KVRDLGKTLAVT---NFNRLA 781
TW GG NL L S+ YYN + P DL + AV+ N N LA
Sbjct: 49 TWSRTFLGGHSVNLFLHSQDYYNHSSPLSFSSADLSLSSAVSFHLNLNTLA 99
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Frame = +3
Query: 351 RPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPTHRRSLGL 530
RP+ P PS L+++ P TT PP P + PR + P P P RS+
Sbjct: 249 RPTTPRPPSPLADAPRLDAPRP----TTPKPP-SPRSDPPRLDAPRPTTPKPPSPRSVSP 303
Query: 531 ALTNK----FRPHVTPSVLSCTGTSVK 599
+ +RP T V + T ++
Sbjct: 304 RAVQRREIVYRPEPTLPVQHASATKIQ 330
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Frame = +3
Query: 351 RPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPTHRRSLGL 530
RP+ P PS L+++ P TT PP P + PR + P P P RS+
Sbjct: 248 RPTTPRPPSPLADAPRLDAPRP----TTPKPP-SPRSDPPRLDAPRPTTPKPPSPRSVSP 302
Query: 531 ALTNK----FRPHVTPSVLSCTGTSVK 599
+ +RP T V + T ++
Sbjct: 303 RAVQRREIVYRPEPTLPVQHASATKIQ 329
>At5g05965.1 68418.m00660 hypothetical protein
Length = 131
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = -1
Query: 859 GKRAKSGCRALFR*L--PPICPKRGNFACKAIKVGNRQGFSQVTNFLKRRPSEIVIRLTY 686
G + S C + + PP+ K+G+ ++ Q + ++ KR S + Y
Sbjct: 25 GSASASSCSTILDSIFPPPVARKKGSHTAPEVQGNISQATDERSSHEKRESSYYSSSIYY 84
Query: 685 *GQIGYRAPPLEGQPSS 635
GQ Y P +G +S
Sbjct: 85 GGQQHYSPPRTDGSSTS 101
>At4g28490.1 68417.m04076 leucine-rich repeat transmembrane protein
kinase, putative
Length = 999
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 662 GPVPNLALISESYYNFTGPSF*KVRDLGKTLAVTNFNRLASKIPPFWAN 808
G +P L + S F+G ++++L + ++N L+ KIPP +AN
Sbjct: 544 GILPVLNYLDLSSNQFSGEIPLELQNLKLNVLNLSYNHLSGKIPPLYAN 592
>At3g62200.1 68416.m06988 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537
Length = 673
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -1
Query: 355 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGSKHA 242
G V I Y D + T H L TG+A +H+ G K A
Sbjct: 65 GPVSISAYGDTNRIPLTIQHALNSTGIALNHVPAGVKDA 103
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 320 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 463
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 394 DELDSTLGFDGSDGRVHILGYDVTTVQ 314
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +3
Query: 354 PSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPTHRRSLGLA 533
P P PS +S+ S ST P P T P + +A P+P + GLA
Sbjct: 294 PMTPQSPSPVSSPSPDQSAAPSDQSTPLAPS--PSETTPTADNITAPAPSPRTNSASGLA 351
Query: 534 LTN 542
+T+
Sbjct: 352 VTS 354
>At5g17260.1 68418.m02022 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
Length = 476
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = +1
Query: 169 WSRTRQSSLPRRPTMNSFPSPRSQTHASSRQPDGEMRPPSWQVHGLLYAVPW*RRTQGCE 348
W +S +P + F SPR + + + + + + W+ G V W R G +
Sbjct: 49 WDLPGKSLIPSKDQEWFFFSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWRDRAIGTK 108
Query: 349 RGHRYHQNQAYYPIR 393
+ Y++ +A + IR
Sbjct: 109 KTLVYYRGRAPHGIR 123
>At5g15840.1 68418.m01853 zinc finger protein CONSTANS (CO)
identical to Zinc finger protein CONSTANS SP:Q39057 from
[Arabidopsis thaliana]
Length = 373
Score = 27.9 bits (59), Expect = 9.2
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +1
Query: 187 SSLPRRP--TMNSFPSPRSQTHASSRQPDGEMRPPSWQVHGLLYAVPW*RRTQGCERGHR 360
+S PR P T+ P P SQ + ++ P + L Y R+T+ E+ R
Sbjct: 275 ASHPRTPKGTVEQQPDPASQMITVT-----QLSPMDREARVLRYREK--RKTRKFEKTIR 327
Query: 361 YHQNQAYYPIRRLVSNRFQGRYQLPATHRG 450
Y +AY IR V+ RF R ++ A +G
Sbjct: 328 YASRKAYAEIRPRVNGRFAKR-EIEAEEQG 356
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +3
Query: 363 PSKPSVLSNSSTGVQPVSRSVSTTSHPP--WCPEATWPRFNVPSACCPTP 506
PS+P S+S + + PV S + PP P A +PS P P
Sbjct: 562 PSQPPAASSSLSPLPPVFNSTQSFQSPPVSTTPSAVPEASTIPSPPAPAP 611
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,781,987
Number of Sequences: 28952
Number of extensions: 585371
Number of successful extensions: 1820
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1804
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2009406400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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