Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31012
         (828 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   6.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   6.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   6.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   6.8  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.0  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 561 MWLRNGLQRPIHRLMELF 614
           +W R+G Q PI+R  ++F
Sbjct: 543 VWERDGRQLPINRKQKVF 560


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -1

Query: 660 LTTRQWRTLLRYFPN 616
           LTTRQ RTL +  PN
Sbjct: 396 LTTRQVRTLYKLPPN 410


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 783 HH*GTYPIMGGVPKIPKC 730
           HH    P M GVP + +C
Sbjct: 138 HHQKNSPYMDGVPFVTQC 155


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 270 VTITALMYADVPSRGHFLLFTKVMLVIN 353
           +T   L Y  +PS   + LF+ V LV+N
Sbjct: 169 ITGNVLFYPFLPSDVSYNLFSFVPLVVN 196


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 270 VTITALMYADVPSRGHFLLFTKVMLVIN 353
           +T   L Y  +PS   + LF+ V LV+N
Sbjct: 125 ITGNVLFYPFLPSDVSYNLFSFVPLVVN 152


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 752 GSPKYQNVLWSTRYMYH 702
           G   Y N+L+ +R M+H
Sbjct: 327 GFENYYNILYFSRIMFH 343


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -3

Query: 721 PLGICTIAEPS*GMPFTPPFFNDTSMAYPLK 629
           P     +  P  G  FT  F N+T +  P+K
Sbjct: 409 PKSKIVLGVPFFGRSFTLQFTNETQVGAPIK 439


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,761
Number of Sequences: 336
Number of extensions: 4827
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)