BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31011
(843 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U90336-1|AAB50011.1| 615|Homo sapiens PEG3 protein. 35 0.42
BC150272-1|AAI50273.1| 1464|Homo sapiens PEG3 protein protein. 35 0.42
AF208980-2|AAG42325.1| 1462|Homo sapiens paternally expressed ge... 35 0.42
AF208980-1|AAG42324.1| 1588|Homo sapiens paternally expressed ge... 35 0.42
AF208970-1|AAG35742.1| 1588|Homo sapiens Kruppel-type zinc finge... 35 0.42
AF208969-1|AAG35741.1| 1462|Homo sapiens Kruppel-type zinc finge... 35 0.42
AF208968-1|AAG35740.1| 1588|Homo sapiens Kruppel-type zinc finge... 35 0.42
AF208967-1|AAG35739.1| 1588|Homo sapiens Kruppel-type zinc finge... 35 0.42
AC006115-1|AAC83176.1| 615|Homo sapiens PEG3 protein. 35 0.42
AB006625-1|BAA22956.2| 1523|Homo sapiens KIAA0287 protein. 35 0.42
AB003039-1|BAB85588.1| 1308|Homo sapiens zinc finger protein pro... 35 0.42
>U90336-1|AAB50011.1| 615|Homo sapiens PEG3 protein.
Length = 615
Score = 34.7 bits (76), Expect = 0.42
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Frame = +2
Query: 257 KIETKYPNGDVAGKYGYIDES-GKQREISYGASSARGF--EPQGAGIMVPPPTLHDPSSN 427
++E PNG+ G G E G+ + + A G EP GAGI P +P
Sbjct: 439 EVEAAEPNGEAEGPDGEAAEPIGEAGQPNGEAEQPNGDADEPDGAGIEDPEERAEEPEGK 498
Query: 428 ALT---DGQEDDGQYREDPKIYED 490
A D E DG EDP+ ED
Sbjct: 499 AEEPEGDADEPDGVGIEDPEEGED 522
>BC150272-1|AAI50273.1| 1464|Homo sapiens PEG3 protein protein.
Length = 1464
Score = 34.7 bits (76), Expect = 0.42
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Frame = +2
Query: 257 KIETKYPNGDVAGKYGYIDES-GKQREISYGASSARGF--EPQGAGIMVPPPTLHDPSSN 427
++E PNG+ G G E G+ + + A G EP GAGI P +P
Sbjct: 1288 EVEAAEPNGEAEGPDGEAAEPIGEAGQPNGEAEQPNGDADEPDGAGIEDPEERAEEPEGK 1347
Query: 428 ALT---DGQEDDGQYREDPKIYED 490
A D E DG EDP+ ED
Sbjct: 1348 AEEPEGDADEPDGVGIEDPEEGED 1371
>AF208980-2|AAG42325.1| 1462|Homo sapiens paternally expressed gene 3
isoform 2 protein.
Length = 1462
Score = 34.7 bits (76), Expect = 0.42
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Frame = +2
Query: 257 KIETKYPNGDVAGKYGYIDES-GKQREISYGASSARGF--EPQGAGIMVPPPTLHDPSSN 427
++E PNG+ G G E G+ + + A G EP GAGI P +P
Sbjct: 1286 EVEAAEPNGEAEGPDGEAAEPIGEAGQPNGEAEQPNGDADEPDGAGIEDPEERAEEPEGK 1345
Query: 428 ALT---DGQEDDGQYREDPKIYED 490
A D E DG EDP+ ED
Sbjct: 1346 AEEPEGDADEPDGVGIEDPEEGED 1369
>AF208980-1|AAG42324.1| 1588|Homo sapiens paternally expressed gene 3
isoform 1 protein.
Length = 1588
Score = 34.7 bits (76), Expect = 0.42
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Frame = +2
Query: 257 KIETKYPNGDVAGKYGYIDES-GKQREISYGASSARGF--EPQGAGIMVPPPTLHDPSSN 427
++E PNG+ G G E G+ + + A G EP GAGI P +P
Sbjct: 1412 EVEAAEPNGEAEGPDGEAAEPIGEAGQPNGEAEQPNGDADEPDGAGIEDPEERAEEPEGK 1471
Query: 428 ALT---DGQEDDGQYREDPKIYED 490
A D E DG EDP+ ED
Sbjct: 1472 AEEPEGDADEPDGVGIEDPEEGED 1495
>AF208970-1|AAG35742.1| 1588|Homo sapiens Kruppel-type zinc finger
protein protein.
Length = 1588
Score = 34.7 bits (76), Expect = 0.42
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Frame = +2
Query: 257 KIETKYPNGDVAGKYGYIDES-GKQREISYGASSARGF--EPQGAGIMVPPPTLHDPSSN 427
++E PNG+ G G E G+ + + A G EP GAGI P +P
Sbjct: 1412 EVEAAEPNGEAEGPDGEAAEPIGEAGQPNGEAEQPNGDADEPDGAGIEDPEERAEEPEGK 1471
Query: 428 ALT---DGQEDDGQYREDPKIYED 490
A D E DG EDP+ ED
Sbjct: 1472 AEEPEGDADEPDGVGIEDPEEGED 1495
>AF208969-1|AAG35741.1| 1462|Homo sapiens Kruppel-type zinc finger
protein protein.
Length = 1462
Score = 34.7 bits (76), Expect = 0.42
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Frame = +2
Query: 257 KIETKYPNGDVAGKYGYIDES-GKQREISYGASSARGF--EPQGAGIMVPPPTLHDPSSN 427
++E PNG+ G G E G+ + + A G EP GAGI P +P
Sbjct: 1286 EVEAAEPNGEAEGPDGEAAEPIGEAGQPNGEAEQPNGDADEPDGAGIEDPEERAEEPEGK 1345
Query: 428 ALT---DGQEDDGQYREDPKIYED 490
A D E DG EDP+ ED
Sbjct: 1346 AEEPEGDADEPDGVGIEDPEEGED 1369
>AF208968-1|AAG35740.1| 1588|Homo sapiens Kruppel-type zinc finger
protein protein.
Length = 1588
Score = 34.7 bits (76), Expect = 0.42
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Frame = +2
Query: 257 KIETKYPNGDVAGKYGYIDES-GKQREISYGASSARGF--EPQGAGIMVPPPTLHDPSSN 427
++E PNG+ G G E G+ + + A G EP GAGI P +P
Sbjct: 1412 EVEAAEPNGEAEGPDGEAAEPIGEAGQPNGEAEQPNGDADEPDGAGIEDPEERAEEPEGK 1471
Query: 428 ALT---DGQEDDGQYREDPKIYED 490
A D E DG EDP+ ED
Sbjct: 1472 AEEPEGDADEPDGVGIEDPEEGED 1495
>AF208967-1|AAG35739.1| 1588|Homo sapiens Kruppel-type zinc finger
protein protein.
Length = 1588
Score = 34.7 bits (76), Expect = 0.42
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Frame = +2
Query: 257 KIETKYPNGDVAGKYGYIDES-GKQREISYGASSARGF--EPQGAGIMVPPPTLHDPSSN 427
++E PNG+ G G E G+ + + A G EP GAGI P +P
Sbjct: 1412 EVEAAEPNGEAEGPDGEAAEPIGEAGQPNGEAEQPNGDADEPDGAGIEDPEERAEEPEGK 1471
Query: 428 ALT---DGQEDDGQYREDPKIYED 490
A D E DG EDP+ ED
Sbjct: 1472 AEEPEGDADEPDGVGIEDPEEGED 1495
>AC006115-1|AAC83176.1| 615|Homo sapiens PEG3 protein.
Length = 615
Score = 34.7 bits (76), Expect = 0.42
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Frame = +2
Query: 257 KIETKYPNGDVAGKYGYIDES-GKQREISYGASSARGF--EPQGAGIMVPPPTLHDPSSN 427
++E PNG+ G G E G+ + + A G EP GAGI P +P
Sbjct: 439 EVEAAEPNGEAEGPDGEAAEPIGEAGQPNGEAEQPNGDADEPDGAGIEDPEERAEEPEGK 498
Query: 428 ALT---DGQEDDGQYREDPKIYED 490
A D E DG EDP+ ED
Sbjct: 499 AEEPEGDADEPDGVGIEDPEEGED 522
>AB006625-1|BAA22956.2| 1523|Homo sapiens KIAA0287 protein.
Length = 1523
Score = 34.7 bits (76), Expect = 0.42
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Frame = +2
Query: 257 KIETKYPNGDVAGKYGYIDES-GKQREISYGASSARGF--EPQGAGIMVPPPTLHDPSSN 427
++E PNG+ G G E G+ + + A G EP GAGI P +P
Sbjct: 1347 EVEAAEPNGEAEGPDGEAAEPIGEAGQPNGEAEQPNGDADEPDGAGIEDPEERAEEPEGK 1406
Query: 428 ALT---DGQEDDGQYREDPKIYED 490
A D E DG EDP+ ED
Sbjct: 1407 AEEPEGDADEPDGVGIEDPEEGED 1430
>AB003039-1|BAB85588.1| 1308|Homo sapiens zinc finger protein protein.
Length = 1308
Score = 34.7 bits (76), Expect = 0.42
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Frame = +2
Query: 257 KIETKYPNGDVAGKYGYIDES-GKQREISYGASSARGF--EPQGAGIMVPPPTLHDPSSN 427
++E PNG+ G G E G+ + + A G EP GAGI P +P
Sbjct: 1132 EVEAAEPNGEAEGPDGEAAEPIGEAGQPNGEAEQPNGDADEPDGAGIEDPEERAEEPEGK 1191
Query: 428 ALT---DGQEDDGQYREDPKIYED 490
A D E DG EDP+ ED
Sbjct: 1192 AEEPEGDADEPDGVGIEDPEEGED 1215
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,056,235
Number of Sequences: 237096
Number of extensions: 2999098
Number of successful extensions: 8514
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8511
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -