Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31007
         (477 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.1  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   1.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   1.9  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.9  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   3.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   3.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   3.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.7  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +2

Query: 233 FLYLQLFFCQIFWLFYFYVNLNFL*MSK*LSVKFLQL*II*NYEG 367
           F ++  F C  F+ ++FY++  +   S+ LS  F  +  +  Y G
Sbjct: 73  FSFMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTG 117


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +2

Query: 233 FLYLQLFFCQIFWLFYFYVNLNFL*MSK*LSVKFLQL*II*NYEG 367
           F ++  F C  F+ ++FY++  +   S+ LS  F  +  +  Y G
Sbjct: 29  FSFMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTG 73


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 194 DDIRSIYFFKLVQFLYLQLFFCQIFWLFYFYVNLNF 301
           +++  IYF+    FL +Q F  QI  L   +   NF
Sbjct: 315 NNLERIYFYWSFGFLIIQRFIHQIGTLEVAFTGKNF 350


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
 Frame = +1

Query: 211 IFFQARTIFVPPTIFLPNF----LVVLLLCQPKLFVNV 312
           + F+ + +     IFL N     L+VLL+C P + V V
Sbjct: 92  VIFKTKDMRNSTNIFLVNLSVADLMVLLVCTPTVLVEV 129


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
 Frame = +1

Query: 211 IFFQARTIFVPPTIFLPNF----LVVLLLCQPKLFVNV 312
           + F+ + +     IFL N     L+VLL+C P + V V
Sbjct: 92  VIFKTKDMRNSTNIFLVNLSVADLMVLLVCTPTVLVEV 129


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 233 FLYLQLFFCQIFWLFYFYVNLNFL 304
           F+  +LFF  + W+ +F   LNF+
Sbjct: 133 FITCELFFVILLWISFF---LNFM 153


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -3

Query: 163 CKM*TVTV*TFSSILENIILVFRFNSNVLSIDY-NFKLQLLIFVFVIAR 20
           C    VT+  F+ I     L+F   S++L +DY +  + L+I +    R
Sbjct: 264 CYKMKVTIDAFNDIFGWSFLLFTLYSSLLLLDYVSCVVALIILILQCGR 312


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -3

Query: 163 CKM*TVTV*TFSSILENIILVFRFNSNVLSIDY-NFKLQLLIFVFVIAR 20
           C    VT+  F+ I     L+F   S++L +DY +  + L+I +    R
Sbjct: 190 CYKMKVTIDAFNDIFGWSFLLFTLYSSLLLLDYVSCVVALIILILQCGR 238


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 233 FLYLQLFFCQIFWLFYFYV 289
           F Y+ L FC  F +F  ++
Sbjct: 261 FYYMHLLFCCAFIIFTMHL 279


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,589
Number of Sequences: 336
Number of extensions: 2159
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)