Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31007
         (477 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93387-1|CAB07651.1|  376|Caenorhabditis elegans Hypothetical pr...    28   3.0  
AF024490-1|AAB70308.1|  334|Caenorhabditis elegans Hypothetical ...    28   4.0  
U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical pr...    27   5.3  
AF098997-5|AAC68717.1|  218|Caenorhabditis elegans Insulin relat...    27   5.3  
Z98851-5|CAB11541.1|  596|Caenorhabditis elegans Hypothetical pr...    27   7.0  
Z98851-4|CAB11542.1|  607|Caenorhabditis elegans Hypothetical pr...    27   7.0  
AC024832-1|AAK71408.1|  167|Caenorhabditis elegans Hypothetical ...    27   9.2  

>Z93387-1|CAB07651.1|  376|Caenorhabditis elegans Hypothetical
           protein T02E9.1 protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 211 IFFQARTIFVPPTIFLPNFLVVLLLCQPKLFVNVKIIVSQVFAIVNN 351
           +FF  R++    T     F+ ++ LC   L V V I  S  + I+NN
Sbjct: 45  VFFITRSLKSSVTALGNTFIYIVALCAVDLLVTVSIPFSLSYMILNN 91


>AF024490-1|AAB70308.1|  334|Caenorhabditis elegans Hypothetical
           protein C02H6.1 protein.
          Length = 334

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
 Frame = -1

Query: 357 FQIIYNCKNLTDNYFDIYKKFRLTXXXXXXXXXXXNSW-------RYKNCTSLKKYIDLI 199
           F  +Y  +NL D+Y+D+++K  L+             W        Y     LK+Y+D +
Sbjct: 131 FSTVY--RNLEDSYYDLFRKTLLSFYYSYTYISKDFDWYLKADDDNYFMIDHLKEYLDTL 188

Query: 198 SSYLPMY 178
            +  P++
Sbjct: 189 DASKPLF 195


>U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical
           protein R03G5.3 protein.
          Length = 1311

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 14/47 (29%), Positives = 29/47 (61%)
 Frame = -3

Query: 199 IVIPTYVQNILSCKM*TVTV*TFSSILENIILVFRFNSNVLSIDYNF 59
           I++  + +++LS     + V + +S L+ ++LVF FN+N   I+ N+
Sbjct: 630 IILSIFTRDMLS--RIEIRVASVTSTLKLVLLVFDFNTNTFQINSNY 674


>AF098997-5|AAC68717.1|  218|Caenorhabditis elegans Insulin related
           protein 31 protein.
          Length = 218

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 253 FLPNFLVVLLLCQPKLFVNVKIIVSQVFAIVNNLKL 360
           F P+F  +   C PKLF  VK +  +   + N +K+
Sbjct: 85  FGPSFKALERSCGPKLFTRVKTVCGEDINVDNKVKI 120


>Z98851-5|CAB11541.1|  596|Caenorhabditis elegans Hypothetical
           protein H12I19.5b protein.
          Length = 596

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +3

Query: 93  NLNTKMMFSRIEENVYTVTVHILQLKIFCT*VGMTILGQYIFSSSYNFCTSNYFFAKFF 269
           +L+ ++ F  I   +Y + +  L  K  C  +  TILG + F  S  FCT    F   F
Sbjct: 142 SLSVEVQFYLIIPLIYLLIIRTLPQK--CHILCFTILGLFSFMYSKLFCTETEAFNSVF 198


>Z98851-4|CAB11542.1|  607|Caenorhabditis elegans Hypothetical
           protein H12I19.5a protein.
          Length = 607

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +3

Query: 93  NLNTKMMFSRIEENVYTVTVHILQLKIFCT*VGMTILGQYIFSSSYNFCTSNYFFAKFF 269
           +L+ ++ F  I   +Y + +  L  K  C  +  TILG + F  S  FCT    F   F
Sbjct: 142 SLSVEVQFYLIIPLIYLLIIRTLPQK--CHILCFTILGLFSFMYSKLFCTETEAFNSVF 198


>AC024832-1|AAK71408.1|  167|Caenorhabditis elegans Hypothetical
           protein Y57E12AL.4 protein.
          Length = 167

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +2

Query: 116 FKNRRKCLYSNCSHLTT*NILYIGRYDDIRSIYFFKLVQFLYLQLFF 256
           FKN R  L+  C+H T   IL+IG      S ++   +   +  +++
Sbjct: 112 FKNMRNNLHFFCNHSTFIKILFIGILMTSSSFFYDSTLYKFFKSMYY 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,522,103
Number of Sequences: 27780
Number of extensions: 178129
Number of successful extensions: 466
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)