Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31005
         (857 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   1.8  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    23   2.3  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    23   2.3  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    23   4.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   4.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   4.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   4.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   4.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   4.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   4.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   4.1  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   9.4  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +2

Query: 140 ILHLKPQPILVSATTMMRNAYTLTINGYRSCCSSRAYFL 256
           ++ ++ Q  +VS T  +RN   +  NG+R+   SR  F+
Sbjct: 193 LIQIETQCEIVSDT--LRNLDKIVTNGFRNVAESRKIFI 229


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 393 YPTNIERVDSDDCFCHQLYWPLCLSCLLK 307
           YPT  + VD D    ++  +   L CLLK
Sbjct: 21  YPTKYDNVDIDAILHNKRLFDNYLQCLLK 49


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 393 YPTNIERVDSDDCFCHQLYWPLCLSCLLK 307
           YPT  + VD D    ++  +   L CLLK
Sbjct: 21  YPTKYDNVDIDAILHNKRLFDNYLQCLLK 49


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 623 GTELMECTFSNSRENFDHWICSLLLIHIGESDY 525
           G +  EC   + R   DH + + + +H GE  Y
Sbjct: 6   GEKPFECQECHKRFTRDHHLKTHMRLHTGERPY 38


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 812  SFFWSISLTSAWPITITQPKFPSASPET 729
            S +WS + TS W  T T  +  +  P T
Sbjct: 1040 STWWSSTTTSPWWTTTTTRRTTTTRPTT 1067


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 653 KRVVFLYRSRGTELMECTFSNSRENFDHWICSLLL 549
           K V+  Y +R T+       +  E  D W+C+LLL
Sbjct: 556 KSVMKKYTTRSTQAKHYVQYDQGE--DRWLCTLLL 588


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 653 KRVVFLYRSRGTELMECTFSNSRENFDHWICSLLL 549
           K V+  Y +R T+       +  E  D W+C+LLL
Sbjct: 789 KSVMKKYTTRSTQAKHYVQYDQGE--DRWLCTLLL 821


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 653 KRVVFLYRSRGTELMECTFSNSRENFDHWICSLLL 549
           K V+  Y +R T+       +  E  D W+C+LLL
Sbjct: 789 KSVMKKYTTRSTQAKHYVQYDQGE--DRWLCTLLL 821


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 552 LDSYWRI*LRRCRRSECAAQGMCP 481
           +D Y R   + CR  +C + GM P
Sbjct: 232 IDMYMRRKCQECRLKKCLSVGMRP 255


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 103 TFCWITYTFTMPN 141
           TF W TY F +PN
Sbjct: 154 TFGWHTYIFDVPN 166


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 417 SFGYFFCEVLNF 452
           SFGY FC  L+F
Sbjct: 69  SFGYLFCASLSF 80


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 623 GTELMECTFSNSRENFDHWICSLLLIHIGESDY 525
           G +  EC   + R   DH + + + +H GE  Y
Sbjct: 159 GEKPFECQECHKRFTRDHHLKTHMRLHTGERPY 191


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 807 ERFPGFGNTQNG 842
           E FPGFG+T  G
Sbjct: 15  ELFPGFGSTCGG 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,084
Number of Sequences: 336
Number of extensions: 4966
Number of successful extensions: 26
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)