Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31005
(857 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 27 0.22
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 25 0.68
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 25 0.89
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 24 1.6
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 24 1.6
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 24 2.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 24 2.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 24 2.1
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 24 2.1
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 23 3.6
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 23 3.6
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 23 3.6
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 23 3.6
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 3.6
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 3.6
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 6.3
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 22 6.3
AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein. 22 8.3
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 27.1 bits (57), Expect = 0.22
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 414 KCCACATYPTNIERVDSDDCFCHQLY 337
KC C+TY +N E V ++C +Q Y
Sbjct: 149 KCDKCSTYQSNGEEVCLENCTGYQQY 174
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 25.4 bits (53), Expect = 0.68
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 92 CPGLAPSLMQAMGSPIRLL 36
CPG+A S MGSP R L
Sbjct: 204 CPGMALSQFDLMGSPYRNL 222
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 25.0 bits (52), Expect = 0.89
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +3
Query: 345 DDKNNRQNRLVQYLLDTLHMHNTYSFGYFFCEVLNFANVVGNIFFL 482
D KNN N V++ L T + T GYF N V I+FL
Sbjct: 52 DTKNNLLNAYVRFKLVTDCIFVTSEPGYFLYTSKNDNEEVCGIYFL 97
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -2
Query: 724 DRMMNQTHRKMKIFSLRIIQSEDQSASC 641
++ M + +KM + SLR ++++ SA C
Sbjct: 247 EKNMREQAKKMNVASLRSSENQNTSAEC 274
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -2
Query: 724 DRMMNQTHRKMKIFSLRIIQSEDQSASC 641
++ M + +KM + SLR ++++ SA C
Sbjct: 123 EKNMREQAKKMNVASLRSSENQNTSAEC 150
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 357 CFCHQLYWPLCLSCLLKSDGLFLLP 283
C + YW LC+ LL ++ L +LP
Sbjct: 84 CSSFRFYWDLCMLLLLVAN-LIILP 107
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 357 CFCHQLYWPLCLSCLLKSDGLFLLP 283
C + YW LC+ LL ++ L +LP
Sbjct: 84 CSSFRFYWDLCMLLLLVAN-LIILP 107
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 357 CFCHQLYWPLCLSCLLKSDGLFLLP 283
C + YW LC+ LL ++ L +LP
Sbjct: 84 CSSFRFYWDLCMLLLLVAN-LIILP 107
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 164 WAAVLDVVFGMVNVYVIQQNVLI 96
W V +V +VNV V+ NVL+
Sbjct: 64 WILVTLIVLAIVNVMVVLGNVLV 86
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -1
Query: 623 GTELMECTFSNSRENFDHWICSLLLIHIGESDY 525
G + EC + R DH + + + +H GE Y
Sbjct: 6 GEKPFECPECHKRFTRDHHLKTHMRLHTGEKPY 38
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 351 KNNRQNRLVQYLLDTLHMHNTYSFGYF 431
KNN+QN L+ L H+ YF
Sbjct: 186 KNNQQNILIPVNYSALLSHDEQQLSYF 212
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3
Query: 759 LRNGYWPSTRE 791
+RNG WP TR+
Sbjct: 58 VRNGQWPETRQ 68
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 23.0 bits (47), Expect = 3.6
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +1
Query: 58 IACISDGANPGHVINTFCWITYTFTMPNTTSKTAA 162
+ ISD + N + W F PN +K AA
Sbjct: 12 LLAISDSQAQEKLKNIYSWKALEFAFPNGYAKLAA 46
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.0 bits (47), Expect = 3.6
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +3
Query: 279 NWEEGKVRLISEGMRGTMASIADDKNNRQNRLVQYLLDTLHMHNTYSFGYFFCEVLNFAN 458
+W E ++++ + + G + +R +L LLD + FG+ EV+ +
Sbjct: 695 SWLE-RIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMMLGS 753
Query: 459 VVG 467
+VG
Sbjct: 754 IVG 756
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.0 bits (47), Expect = 3.6
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +3
Query: 279 NWEEGKVRLISEGMRGTMASIADDKNNRQNRLVQYLLDTLHMHNTYSFGYFFCEVLNFAN 458
+W E ++++ + + G + +R +L LLD + FG+ EV+ +
Sbjct: 733 SWLE-RIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMMLGS 791
Query: 459 VVG 467
+VG
Sbjct: 792 IVG 794
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 552 LDSYWRI*LRRCRRSECAAQGMCP 481
+D Y R + CR +C GM P
Sbjct: 231 IDMYMRRKCQECRLKKCLTVGMRP 254
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 552 LDSYWRI*LRRCRRSECAAQGMCP 481
+D Y R + CR +C GM P
Sbjct: 28 IDMYMRRKCQECRLKKCLTVGMRP 51
>AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein.
Length = 76
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -2
Query: 700 RKMKIFSLRIIQSEDQSASC 641
+KM + SLR ++++ SA C
Sbjct: 5 KKMNVASLRSSENQNTSAEC 24
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 263,327
Number of Sequences: 438
Number of extensions: 5833
Number of successful extensions: 28
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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