BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS31003 (860 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_01_1206 - 9702128-9702184,9702272-9702323,9702410-9702471,970... 68 8e-12 01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 29 4.8 01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815... 29 4.8 12_01_0611 - 5034481-5034709,5034863-5035020,5035231-5035475,503... 28 8.3 08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 28 8.3 >01_01_1206 - 9702128-9702184,9702272-9702323,9702410-9702471, 9702578-9702665,9703027-9703095,9703224-9703281, 9703895-9703996,9704075-9704179,9704273-9704624, 9706005-9706100,9706427-9706501,9707192-9707370, 9707501-9707740,9707922-9708017,9708193-9708306, 9708428-9708527 Length = 614 Score = 68.1 bits (159), Expect = 8e-12 Identities = 33/91 (36%), Positives = 49/91 (53%) Frame = +2 Query: 233 ELRKGLWLEQEFASLDGDCFEYEDKEYVYKLCMFQKVTQKSKNGGMEVGLGNWGEWAGPE 412 +L+ E+EF CFE ++ +YVYK+C F+K +Q G LG W ++ Sbjct: 481 KLKHDFGKEKEFYYFYDQCFESKEGKYVYKVCPFKKASQVE--GHSTTSLGRWDKF---- 534 Query: 413 NNKYSVMKYTNGIACWNGPSRTTTVNVNCDL 505 Y VM+++NG CWNGP R+ V + C L Sbjct: 535 EESYRVMQFSNGDRCWNGPDRSLKVRLRCGL 565 Score = 37.1 bits (82), Expect = 0.018 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = +1 Query: 502 LGTKITSVTEPFRCEYKMELSTPAACDDSSTSQ 600 L ++ V EP RCEY LSTPA CD+ + Sbjct: 565 LNNELNGVDEPSRCEYVAVLSTPALCDEQKLKE 597 Score = 32.7 bits (71), Expect = 0.39 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +3 Query: 96 TVSEQSKSYND-ETQKIVDQASEARRQYTDAERTVREIESNIRNIKQNLEKDYG 254 TV +++N +T + +AS R++Y DA + +I+S I + L+ D+G Sbjct: 434 TVQNVLRTFNFFKTPVDLSEASRVRKEYDDASSKLSKIQSRISTLTDKLKHDFG 487 >01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752, 29646843-29646899,29647007-29647094,29647304-29647374, 29647457-29647585,29647662-29648051,29648332-29648517, 29648612-29648692,29648787-29648879,29648966-29649086, 29649200-29649409,29649560-29649727,29649898-29650065, 29650144-29650311,29650453-29650620,29650738-29650905, 29651023-29651190,29651567-29651734,29652391-29652558, 29652645-29652812,29655720-29655887,29656069-29656236, 29656391-29656558,29656670-29656837,29657525-29657664, 29658033-29658221,29658243-29658315,29658379-29658452, 29658535-29658654,29658718-29658738,29658794-29658999, 29659094-29659271,29660066-29660126,29660232-29660341, 29660427-29660558,29661091-29661258,29661339-29661465, 29661794-29661831,29663321-29663422,29663505-29663562, 29663659-29663760,29663844-29663990,29664098-29664234, 29664313-29664462,29664561-29664720,29665820-29665878, 29666025-29666181,29666288-29666433,29666523-29666666, 29667242-29667376 Length = 2344 Score = 29.1 bits (62), Expect = 4.8 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = +3 Query: 123 NDETQKIVDQASEARRQYTDAERTVREIESNIRNIKQNLEK 245 +D+T+K +A E +Q R + E E NI +++N+E+ Sbjct: 1400 HDQTKKAFSEAQEINQQLY---RKIEEAEKNIEQLRENVER 1437 >01_06_0213 + 27580635-27581105,27581206-27581298,27581376-27581540, 27581640-27581862,27582329-27582429,27582666-27582713, 27583086-27583172,27583745-27583879,27583985-27584140, 27585336-27585545,27585641-27586351,27586429-27586974, 27587872-27588495,27588595-27588699,27590460-27590711, 27590939-27591766 Length = 1584 Score = 29.1 bits (62), Expect = 4.8 Identities = 13/46 (28%), Positives = 29/46 (63%) Frame = +3 Query: 108 QSKSYNDETQKIVDQASEARRQYTDAERTVREIESNIRNIKQNLEK 245 + ++Y+DE VD+ +R++ + + +E+E++ R I++ LEK Sbjct: 140 ERRAYHDEDGSRVDR----KRKHNEEAKIAKEVEAHERRIRKELEK 181 >12_01_0611 - 5034481-5034709,5034863-5035020,5035231-5035475, 5036686-5036983,5037644-5038482,5039763-5039823 Length = 609 Score = 28.3 bits (60), Expect = 8.3 Identities = 9/26 (34%), Positives = 15/26 (57%) Frame = +2 Query: 332 FQKVTQKSKNGGMEVGLGNWGEWAGP 409 ++ V ++ K +VG G WG+W P Sbjct: 24 WETVEKRVKKPAQQVGKGQWGQWNSP 49 >08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374, 21997494-21997838,21998323-21999240,21999312-21999640, 21999709-21999832,21999901-22000071,22000188-22001648, 22002647-22002910,22003866-22004189 Length = 1831 Score = 28.3 bits (60), Expect = 8.3 Identities = 10/33 (30%), Positives = 18/33 (54%) Frame = -1 Query: 380 DLPPYHHSWIFVLPSGTYTVCIHILCLHIQSNH 282 +LPP H + +V P G+ T+ + L + + H Sbjct: 949 ELPPEAHVYCYVHPQGSLTISVRKLAVKLPGEH 981 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,355,651 Number of Sequences: 37544 Number of extensions: 431907 Number of successful extensions: 1150 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1148 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2409218220 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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