Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31003
(860 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47358-10|CAA87438.1| 507|Caenorhabditis elegans Hypothetical p... 82 6e-16
Z47356-9|CAA87420.1| 507|Caenorhabditis elegans Hypothetical pr... 82 6e-16
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 29 4.3
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical ... 29 4.3
Z95623-3|CAB09135.1| 327|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z77657-9|CAB01149.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z49913-7|CAA90149.1| 327|Caenorhabditis elegans Hypothetical pr... 28 7.4
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 28 7.4
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 28 7.4
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 28 7.4
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 28 9.8
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 28 9.8
U55366-1|AAA97980.2| 430|Caenorhabditis elegans Suppressor of c... 28 9.8
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 9.8
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 28 9.8
AF419335-1|AAL15971.1| 430|Caenorhabditis elegans multisubstrat... 28 9.8
AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High inciden... 28 9.8
>Z47358-10|CAA87438.1| 507|Caenorhabditis elegans Hypothetical
protein ZK1307.8 protein.
Length = 507
Score = 81.8 bits (193), Expect = 6e-16
Identities = 33/84 (39%), Positives = 49/84 (58%)
Frame = +2
Query: 257 EQEFASLDGDCFEYEDKEYVYKLCMFQKVTQKSKNGGMEVGLGNWGEWAGPENNKYSVMK 436
+ +A+L CF+ ++Y Y+ C F + TQK LG++ EW+GPE NKYS M
Sbjct: 388 DSAWAALKDKCFDRNVQQYTYQFCPFGQNTQKDTGAYSGTSLGSFKEWSGPEGNKYSKMH 447
Query: 437 YTNGIACWNGPSRTTTVNVNCDLE 508
+ +G CWNGP R+T + + C E
Sbjct: 448 FGDGQQCWNGPKRSTDITIECGEE 471
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 105 EQSKSYNDETQKIVDQASEARRQYTDAERTVREIESNIRNIKQNLEKDYG 254
E+ Y E Q++ ++A EARR + + V+++++ IR + DYG
Sbjct: 337 EKMPDYPPEVQQLTEKAREARRLFDEVNTKVQDLDAKIREAEDFANSDYG 386
Score = 32.7 bits (71), Expect = 0.35
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 511 KITSVTEPFRCEYKMELSTPAACDDSSTSQEH 606
++ VTEP +CEY TP AC D H
Sbjct: 473 ELVEVTEPAKCEYLFTFRTPLACADPDKEVVH 504
>Z47356-9|CAA87420.1| 507|Caenorhabditis elegans Hypothetical
protein ZK1307.8 protein.
Length = 507
Score = 81.8 bits (193), Expect = 6e-16
Identities = 33/84 (39%), Positives = 49/84 (58%)
Frame = +2
Query: 257 EQEFASLDGDCFEYEDKEYVYKLCMFQKVTQKSKNGGMEVGLGNWGEWAGPENNKYSVMK 436
+ +A+L CF+ ++Y Y+ C F + TQK LG++ EW+GPE NKYS M
Sbjct: 388 DSAWAALKDKCFDRNVQQYTYQFCPFGQNTQKDTGAYSGTSLGSFKEWSGPEGNKYSKMH 447
Query: 437 YTNGIACWNGPSRTTTVNVNCDLE 508
+ +G CWNGP R+T + + C E
Sbjct: 448 FGDGQQCWNGPKRSTDITIECGEE 471
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 105 EQSKSYNDETQKIVDQASEARRQYTDAERTVREIESNIRNIKQNLEKDYG 254
E+ Y E Q++ ++A EARR + + V+++++ IR + DYG
Sbjct: 337 EKMPDYPPEVQQLTEKAREARRLFDEVNTKVQDLDAKIREAEDFANSDYG 386
Score = 32.7 bits (71), Expect = 0.35
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 511 KITSVTEPFRCEYKMELSTPAACDDSSTSQEH 606
++ VTEP +CEY TP AC D H
Sbjct: 473 ELVEVTEPAKCEYLFTFRTPLACADPDKEVVH 504
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 99 VSEQSKSYNDETQKIVDQASEARRQYTDAERTVREIES-NIRNIKQNLE 242
V + + D +++ D+A +A++Q D E ++EIE+ I IK+ E
Sbjct: 585 VGDSLLTEKDSVKRLQDEAEKAKKQVADFEEKLKEIETEKIALIKKQEE 633
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +2
Query: 257 EQEFASLDGDCFEYEDKEYVYKLCMFQKVTQKSKNGGMEVGLGNWGEWAGP 409
++E A + + F+ +D ++ M + V +K K +++ L WG W GP
Sbjct: 495 DEEAAQVINEAFKDDDVIGDFE-DMKEGVKEKEKVKDVDLNLAGWGSWVGP 544
>AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical
protein M151.3 protein.
Length = 836
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/41 (26%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +3
Query: 123 NDETQKIVDQASEARRQYTDAERTVR-EIESNIRNIKQNLE 242
N+E QK++D + R++ D+ R + ++E+ I ++++ L+
Sbjct: 206 NEELQKLIDSQKKESRRFQDSARIKKMKLEAQIEDLEEKLK 246
>Z95623-3|CAB09135.1| 327|Caenorhabditis elegans Hypothetical
protein ZK938.1 protein.
Length = 327
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 398 WAGPENNKYSVMKYTNGIACWNGPS--RTTTVNVNCDLEQRSHQ 523
WA PENN K + G++ G + + T +N DL R HQ
Sbjct: 202 WADPENNHTGWGKNSRGVSYIFGANVVKDFTEKMNIDLIARGHQ 245
>Z77657-9|CAB01149.2| 381|Caenorhabditis elegans Hypothetical
protein F08H9.5 protein.
Length = 381
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -2
Query: 502 VTVDINSCCSTWTIPASNSICVFHHRVFIVF 410
VT D+N C S WT + S C ++ +
Sbjct: 18 VTADVNHCPSGWTFSTNTSYCYIQSAQYLSY 48
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3
Query: 105 EQSKSYNDETQKIVDQASEARRQYTDAERTVREIESNIRNIKQNLEK 245
++ K++ + + +A EA + A+R VRE E + K+N +K
Sbjct: 1833 QRLKAFQSDLETESRRAGEASKTLARADRKVREFEFQVAEDKKNYDK 1879
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3
Query: 105 EQSKSYNDETQKIVDQASEARRQYTDAERTVREIESNIRNIKQNLEK 245
++ K++ + + +A EA + A+R VRE E + K+N +K
Sbjct: 1833 QRLKAFQSDLETESRRAGEASKTLARADRKVREFEFQVAEDKKNYDK 1879
>Z49913-7|CAA90149.1| 327|Caenorhabditis elegans Hypothetical
protein ZK938.1 protein.
Length = 327
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 398 WAGPENNKYSVMKYTNGIACWNGPS--RTTTVNVNCDLEQRSHQ 523
WA PENN K + G++ G + + T +N DL R HQ
Sbjct: 202 WADPENNHTGWGKNSRGVSYIFGANVVKDFTEKMNIDLIARGHQ 245
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3
Query: 105 EQSKSYNDETQKIVDQASEARRQYTDAERTVREIESNIRNIKQNLEK 245
++ K++ + + +A EA + A+R VRE E + K+N +K
Sbjct: 1833 QRLKAFQSDLETESRRAGEASKTLARADRKVREFEFQVAEDKKNYDK 1879
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 465 PFQQAIPFVYFITEYLLFSGPAHSPQLPRPTSIPPFLDF 349
P+Q P + T Y L P H P TS+PPF DF
Sbjct: 570 PYQHVQPQMIPATYYNL--PPQHMAPPPITTSLPPFCDF 606
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 465 PFQQAIPFVYFITEYLLFSGPAHSPQLPRPTSIPPFLDF 349
P+Q P + T Y L P H P TS+PPF DF
Sbjct: 570 PYQHVQPQMIPATYYNL--PPQHMAPPPITTSLPPFCDF 606
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 141 IVDQASEARRQYTDAERTVREIESNIRNIKQNLE 242
+ Q EARR+ DAER +++S + ++ L+
Sbjct: 235 LAQQLEEARRRLEDAERERSQLQSQLHQVQLELD 268
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 141 IVDQASEARRQYTDAERTVREIESNIRNIKQNLE 242
+ Q EARR+ DAER +++S + ++ L+
Sbjct: 235 LAQQLEEARRRLEDAERERSQLQSQLHQVQLELD 268
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 141 IVDQASEARRQYTDAERTVREIESNIRNIKQNLE 242
+ Q EARR+ DAER +++S + ++ L+
Sbjct: 251 LAQQLEEARRRLEDAERERSQLQSQLHQVQLELD 284
>U55366-1|AAA97980.2| 430|Caenorhabditis elegans Suppressor of clr
protein 1 protein.
Length = 430
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 458 SKQFHLCISSQSIYCFQDLPILPNYQDLP 372
SKQ+H +S+ LP PNY +LP
Sbjct: 178 SKQYHRMHHFKSVISHNSLPSNPNYNNLP 206
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
protein T23F2.2b protein.
Length = 1538
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 129 ETQKIVDQASEARRQ-YTDAERTVREIESNIRNIKQNLEK 245
ET+ ++ E+ RQ ++DA+ +RE+E + +++LEK
Sbjct: 480 ETKNLMKNEIESLRQTFSDAKIRIRELEEDANIFRKDLEK 519
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
protein T23F2.2a protein.
Length = 1534
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 129 ETQKIVDQASEARRQ-YTDAERTVREIESNIRNIKQNLEK 245
ET+ ++ E+ RQ ++DA+ +RE+E + +++LEK
Sbjct: 480 ETKNLMKNEIESLRQTFSDAKIRIRELEEDANIFRKDLEK 519
>AF419335-1|AAL15971.1| 430|Caenorhabditis elegans multisubstrate
adaptor proteinSOC-1 protein.
Length = 430
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 458 SKQFHLCISSQSIYCFQDLPILPNYQDLP 372
SKQ+H +S+ LP PNY +LP
Sbjct: 178 SKQYHRMHHFKSVISHNSLPSNPNYNNLP 206
>AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High incidence
of males (increasedx chromosome loss) protein 1, isoform
a protein.
Length = 1281
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 120 YNDETQKIVDQASEARRQYTDAERTVREIESNIRNIKQNL-EKDYG 254
YN E +V Q SEA + ER R E+ + +K+N E YG
Sbjct: 483 YNKELVAVVRQLSEASGDSAEGERNQRRTEA-LEGLKKNFPESVYG 527
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,718,256
Number of Sequences: 27780
Number of extensions: 429792
Number of successful extensions: 1437
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1435
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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