Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31000
(846 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 185 4e-47
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 185 4e-47
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 184 7e-47
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 184 7e-47
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 183 1e-46
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 183 1e-46
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 179 2e-45
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 113 1e-25
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 112 2e-25
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 112 3e-25
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 111 7e-25
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 110 1e-24
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 109 2e-24
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 108 4e-24
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 108 4e-24
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 105 3e-23
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 73 2e-13
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 73 2e-13
At4g38980.1 68417.m05523 expressed protein 32 0.42
At2g37730.1 68415.m04627 fringe-related protein similarity to pr... 31 0.73
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 3.9
At2g27360.1 68415.m03296 lipase, putative similar to lipase [Ara... 29 3.9
At1g76160.1 68414.m08844 multi-copper oxidase type I family prot... 28 6.8
At1g13870.1 68414.m01628 expressed protein similar to KTI12 prot... 28 6.8
At1g12290.1 68414.m01421 disease resistance protein (CC-NBS-LRR ... 28 6.8
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 185 bits (450), Expect = 4e-47
Identities = 102/186 (54%), Positives = 123/186 (66%), Gaps = 5/186 (2%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 400 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWE 579
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGGT G + +
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 580 FAIYPAPQVSTGRRRALQLYPH--QPTQTLEHSDCGFSWFDNESHLWTFCPP*SRHLKRP 753
F +YP+PQVST ++ Y LEH+D DNE+ ++ C S +++RP
Sbjct: 169 FTVYPSPQVSTS---VVEPYNSVLSTHSLLEHTDVSI-LLDNEA-IYDICRR-SLNIERP 222
Query: 754 ---NLN 762
NLN
Sbjct: 223 TYTNLN 228
Score = 132 bits (318), Expect = 4e-31
Identities = 53/63 (84%), Positives = 59/63 (93%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 185 bits (450), Expect = 4e-47
Identities = 102/186 (54%), Positives = 123/186 (66%), Gaps = 5/186 (2%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 400 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWE 579
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGGT G + +
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 580 FAIYPAPQVSTGRRRALQLYPH--QPTQTLEHSDCGFSWFDNESHLWTFCPP*SRHLKRP 753
F +YP+PQVST ++ Y LEH+D DNE+ ++ C S +++RP
Sbjct: 169 FTVYPSPQVSTS---VVEPYNSVLSTHSLLEHTDVSI-LLDNEA-IYDICRR-SLNIERP 222
Query: 754 ---NLN 762
NLN
Sbjct: 223 TYTNLN 228
Score = 132 bits (318), Expect = 4e-31
Identities = 53/63 (84%), Positives = 59/63 (93%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 184 bits (448), Expect = 7e-47
Identities = 102/186 (54%), Positives = 122/186 (65%), Gaps = 5/186 (2%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 400 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWE 579
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGGT G + +
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 580 FAIYPAPQVSTGRRRALQLYPH--QPTQTLEHSDCGFSWFDNESHLWTFCPP*SRHLKRP 753
F +YP+PQVST ++ Y LEH+D DNE+ ++ C S ++RP
Sbjct: 169 FTVYPSPQVSTS---VVEPYNSVLSTHSLLEHTDVSI-LLDNEA-IYDICRR-SLSIERP 222
Query: 754 ---NLN 762
NLN
Sbjct: 223 TYTNLN 228
Score = 133 bits (321), Expect = 2e-31
Identities = 53/63 (84%), Positives = 60/63 (95%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 184 bits (448), Expect = 7e-47
Identities = 102/186 (54%), Positives = 122/186 (65%), Gaps = 5/186 (2%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 400 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWE 579
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGGT G + +
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 580 FAIYPAPQVSTGRRRALQLYPH--QPTQTLEHSDCGFSWFDNESHLWTFCPP*SRHLKRP 753
F +YP+PQVST ++ Y LEH+D DNE+ ++ C S ++RP
Sbjct: 169 FTVYPSPQVSTS---VVEPYNSVLSTHSLLEHTDVSI-LLDNEA-IYDICRR-SLSIERP 222
Query: 754 ---NLN 762
NLN
Sbjct: 223 TYTNLN 228
Score = 133 bits (321), Expect = 2e-31
Identities = 53/63 (84%), Positives = 60/63 (95%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 183 bits (446), Expect = 1e-46
Identities = 101/186 (54%), Positives = 122/186 (65%), Gaps = 5/186 (2%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 400 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWE 579
T+GKEIVDL LDR+RKLAD CTGLQGFL+F++ GGGT G + +
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 580 FAIYPAPQVSTGRRRALQLYPH--QPTQTLEHSDCGFSWFDNESHLWTFCPP*SRHLKRP 753
F IYP+PQVST ++ Y LEH+D DNE+ ++ C S ++RP
Sbjct: 169 FTIYPSPQVSTA---VVEPYNSVLSTHSLLEHTDVAV-LLDNEA-IYDICRR-SLDIERP 222
Query: 754 ---NLN 762
NLN
Sbjct: 223 TYTNLN 228
Score = 114 bits (275), Expect = 6e-26
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAG
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 183 bits (446), Expect = 1e-46
Identities = 101/186 (54%), Positives = 122/186 (65%), Gaps = 5/186 (2%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 400 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWE 579
T+GKEIVDL LDR+RKLAD CTGLQGFL+F++ GGGT G + +
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 580 FAIYPAPQVSTGRRRALQLYPH--QPTQTLEHSDCGFSWFDNESHLWTFCPP*SRHLKRP 753
F IYP+PQVST ++ Y LEH+D DNE+ ++ C S ++RP
Sbjct: 169 FTIYPSPQVSTA---VVEPYNSVLSTHSLLEHTDVAV-LLDNEA-IYDICRR-SLDIERP 222
Query: 754 ---NLN 762
NLN
Sbjct: 223 TYTNLN 228
Score = 114 bits (275), Expect = 6e-26
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAG
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 179 bits (436), Expect = 2e-45
Identities = 84/131 (64%), Positives = 98/131 (74%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F S QHVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 400 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWE 579
T+G+EIVD L+R+RKLAD CTGLQGFL+F++ GGGT G + +
Sbjct: 109 TVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLG 168
Query: 580 FAIYPAPQVST 612
F IYP+PQVST
Sbjct: 169 FTIYPSPQVST 179
Score = 111 bits (266), Expect = 7e-25
Identities = 44/63 (69%), Positives = 53/63 (84%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 113 bits (273), Expect = 1e-25
Identities = 53/119 (44%), Positives = 75/119 (63%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 432
++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 RYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 117
Query: 433 DRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWEFAIYPAPQVS 609
D +RK A+ C LQGF + HS GGGT G S + F+++P+P+VS
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 247
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 248 AGSTYP 265
G P
Sbjct: 56 CGRYVP 61
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 112 bits (270), Expect = 2e-25
Identities = 53/119 (44%), Positives = 75/119 (63%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 432
++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 RYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 433 DRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWEFAIYPAPQVS 609
D +RK A+ C LQGF + HS GGGT G S + F+++P+P+VS
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVS 176
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 257 TYP 265
P
Sbjct: 59 YVP 61
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 112 bits (269), Expect = 3e-25
Identities = 52/119 (43%), Positives = 75/119 (63%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 432
++VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 59 RYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 118
Query: 433 DRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWEFAIYPAPQVS 609
D +RK A+ C LQGF + HS GGGT G S + F+++P+P+VS
Sbjct: 119 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 177
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 257 TYP 265
P
Sbjct: 60 YVP 62
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 111 bits (266), Expect = 7e-25
Identities = 53/117 (45%), Positives = 73/117 (62%)
Frame = +1
Query: 259 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 438
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 439 IRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWEFAIYPAPQVS 609
+RK A+ C LQGF + HS GGGT G S + F+++P+P+VS
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 257 TYP 265
P
Sbjct: 59 FVP 61
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 110 bits (265), Expect = 1e-24
Identities = 51/119 (42%), Positives = 75/119 (63%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 432
++VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 59 RYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 118
Query: 433 DRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWEFAIYPAPQVS 609
D +RK A+ C LQGF + HS GGGT G S + F+++P+P+VS
Sbjct: 119 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 177
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 257 TYP 265
P
Sbjct: 60 YVP 62
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 109 bits (263), Expect = 2e-24
Identities = 51/119 (42%), Positives = 75/119 (63%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 432
++VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 KYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 433 DRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWEFAIYPAPQVS 609
D +RK A+ C LQGF + HS GGGT G S + F+++P+P+VS
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVS 176
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/63 (38%), Positives = 31/63 (49%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 257 TYP 265
P
Sbjct: 59 YVP 61
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 108 bits (260), Expect = 4e-24
Identities = 52/117 (44%), Positives = 72/117 (61%)
Frame = +1
Query: 259 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 438
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 439 IRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWEFAIYPAPQVS 609
+RK A+ C LQGF + HS GGGT G S + F+++P+P+VS
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 257 TYP 265
P
Sbjct: 59 FVP 61
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 108 bits (260), Expect = 4e-24
Identities = 52/117 (44%), Positives = 72/117 (61%)
Frame = +1
Query: 259 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 438
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 439 IRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWEFAIYPAPQVS 609
+RK A+ C LQGF + HS GGGT G S + F+++P+P+VS
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 257 TYP 265
P
Sbjct: 59 FVP 61
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 105 bits (253), Expect = 3e-23
Identities = 50/119 (42%), Positives = 74/119 (62%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 432
++VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 KYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 433 DRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWEFAIYPAPQVS 609
D +RK A+ LQGF + HS GGGT G S + F+++P+P+VS
Sbjct: 118 DVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVS 176
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 257 TYP 265
P
Sbjct: 59 YVP 61
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Frame = +1
Query: 229 FLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 402
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ 110
Query: 403 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWEF 582
GK + + ++D I + AD L+GF++ HS GGT G Y ++ L +
Sbjct: 111 -GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTY 169
Query: 583 AIYP 594
+++P
Sbjct: 170 SVFP 173
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 235
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Frame = +1
Query: 229 FLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 402
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ 110
Query: 403 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WSVSPLTTARSLNWEF 582
GK + + ++D I + AD L+GF++ HS GGT G Y ++ L +
Sbjct: 111 -GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTY 169
Query: 583 AIYP 594
+++P
Sbjct: 170 SVFP 173
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 235
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
>At4g38980.1 68417.m05523 expressed protein
Length = 280
Score = 32.3 bits (70), Expect = 0.42
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Frame = -1
Query: 498 EGVEDQESLQTGTLVSELADSVQNQIY--DFLS----NXXXXXXXXXGRIFLTSNKLFWM 337
E +E+ S+ G E SV +Q++ DF+S + + +TS ++F +
Sbjct: 156 ESIEEDGSVSNGEAKEEKPASVSSQVFKDDFMSTYVEDNAEDCNVTEDPVKVTSQEIFKV 215
Query: 336 KQLSVCASAD----LINNSRFKIDEDSTGYVLPAPVSLKKVLKESS 211
L V D L+ + +DE ST LP P++ +V+ E S
Sbjct: 216 WDLEVVGDNDEEDGLVLQLKKALDESSTVQPLPQPLNDDQVVSEKS 261
>At2g37730.1 68415.m04627 fringe-related protein similarity to
predicted proteins + similar to hypothetical protein
GB:AAC23643 [Arabidopsis thaliana] + weak similarity to
Fringe [Schistocerca gregaria](GI:6573138);Fringe
encodes an extracellular protein that regulates Notch
signalling.
Length = 532
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 541 VSPLTTARSLNWEFAIYPAPQVSTGRRRALQLYPHQPTQTLEHSDC 678
V+PL T L++ I+P RR + Y P++ ++HS C
Sbjct: 311 VAPLVTLHHLDYVDPIFPGTTQIDALRRLVSAYKTDPSRIIQHSFC 356
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 246 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 121
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At2g27360.1 68415.m03296 lipase, putative similar to lipase
[Arabidopsis thaliana] GI:1145627; contains Pfam profile
PF00657: Lipase/Acylhydrolase with GDSL-like motif
Length = 394
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Frame = +1
Query: 409 KEIVDLVLDRIRKLADQCT--GLQGFLIFHSFGGGTALGSL-----PY*WSVSPLTTARS 567
KE+V LV+ I + G + FL+ +F G ++ L P +PLT +
Sbjct: 194 KELVPLVITTISSAISELVDMGARTFLVPGNFPLGCSVAYLTLYETPNKEEYNPLTGCLT 253
Query: 568 LNWEFAIYPAPQVSTGRRRALQLYPH 645
+F++Y Q+ +R LYPH
Sbjct: 254 WLNDFSVYHNEQLQAELKRLRNLYPH 279
>At1g76160.1 68414.m08844 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 541
Score = 28.3 bits (60), Expect = 6.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 634 VVGLDDGQWKPEARGRW 584
VVG+D GQW P++R +
Sbjct: 443 VVGMDGGQWSPDSRNEY 459
>At1g13870.1 68414.m01628 expressed protein similar to KTI12 protein
(SP:P34253) {Saccharomyces cerevisiae}; contains Prosite
PS00070: Aldehyde dehydrogenases cysteine active site
Length = 302
Score = 28.3 bits (60), Expect = 6.8
Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 8/81 (9%)
Frame = -3
Query: 775 FKVWC*GLAASNVEITAGRMSIDGFHCRTMKSHSQSAQGFVWVGEDRVVGLDDGQW---- 608
+++WC AA + +D HCR GED G DDG +
Sbjct: 90 YELWCIARAAG-IRYCVVYCDVDEAHCRQWNKERSDR------GED---GYDDGIFEDLV 139
Query: 607 ----KPEARGRWRTPSLDFLP 557
KPE R RW +P + P
Sbjct: 140 RRFEKPERRNRWDSPLFELYP 160
>At1g12290.1 68414.m01421 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 884
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -3
Query: 697 CRTMKSHSQSAQGFVWVGEDRVVGLDDGQWKPEARGRWRTPSLDFLP 557
CR + +Q + GE+ V+ D +WK + L FLP
Sbjct: 829 CRKLTKLPLDSQSCIVAGEELVIQYGDEEWKERVEWEDKATRLRFLP 875
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,430,779
Number of Sequences: 28952
Number of extensions: 479732
Number of successful extensions: 1483
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1459
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1960634400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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